RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 GIGYF2Q6Y7W6 1299 aaKnown RBP10□□□□□ -0.81
KARSP3-201ENST00000571212 TRIM66O15016 1216 aa9.99□□□□□ -0.81
KARSP3-201ENST00000571212 USP46P62068 366 aa9.99□□□□□ -0.81
KARSP3-201ENST00000571212 Q3C1V9 767 aa9.99□□□□□ -0.81
KARSP3-201ENST00000571212 NUTM1Q86Y26 1132 aa9.99□□□□□ -0.81
KARSP3-201ENST00000571212 MSS51Q4VC12 460 aa9.98□□□□□ -0.81
KARSP3-201ENST00000571212 USB1Q9BQ65 265 aaKnown RBP9.97□□□□□ -0.81
KARSP3-201ENST00000571212 TNFRSF10AO00220 468 aa9.97□□□□□ -0.81
KARSP3-201ENST00000571212 PARP9Q8IXQ6 854 aa9.97□□□□□ -0.81
KARSP3-201ENST00000571212 SPIRE2Q8WWL2 714 aa9.97□□□□□ -0.81
KARSP3-201ENST00000571212 AK7Q96M32 723 aa9.97□□□□□ -0.81
KARSP3-201ENST00000571212 NDUFV2P19404 249 aa9.96□□□□□ -0.82
KARSP3-201ENST00000571212 TRAF7Q6Q0C0 670 aa9.96□□□□□ -0.82
KARSP3-201ENST00000571212 SLC24A3Q9HC58 644 aa9.96□□□□□ -0.82
KARSP3-201ENST00000571212 PCDHGC3Q9UN70 934 aa9.96□□□□□ -0.82
KARSP3-201ENST00000571212 GDF9O60383 454 aa9.94□□□□□ -0.82
KARSP3-201ENST00000571212 MMP16P51512 607 aa9.94□□□□□ -0.82
KARSP3-201ENST00000571212 FOXC1Q12948 553 aa9.94□□□□□ -0.82
KARSP3-201ENST00000571212 BEGAINQ9BUH8 593 aa9.94□□□□□ -0.82
KARSP3-201ENST00000571212 MOXD2PA6NHM9 499 aa9.93□□□□□ -0.82
KARSP3-201ENST00000571212 FDX1P10109 184 aa9.93□□□□□ -0.82
KARSP3-201ENST00000571212 MS4A1P11836 297 aa9.93□□□□□ -0.82
KARSP3-201ENST00000571212 SLC24A1O60721 1099 aa9.92□□□□□ -0.82
KARSP3-201ENST00000571212 DXOO77932 396 aaKnown RBP9.92□□□□□ -0.82
KARSP3-201ENST00000571212 RPIAP49247 311 aa9.92□□□□□ -0.82
KARSP3-201ENST00000571212 PKD2L1Q9P0L9 805 aa9.92□□□□□ -0.82
KARSP3-201ENST00000571212 UNC13AQ9UPW8 1703 aa9.91□□□□□ -0.82
KARSP3-201ENST00000571212 PRR20EP86478 221 aa9.9□□□□□ -0.82
KARSP3-201ENST00000571212 PRR20CP86479 221 aa9.9□□□□□ -0.82
KARSP3-201ENST00000571212 PRR20DP86480 221 aa9.9□□□□□ -0.82
KARSP3-201ENST00000571212 PRR20BP86481 221 aa9.9□□□□□ -0.82
KARSP3-201ENST00000571212 PRR20AP86496 221 aa9.9□□□□□ -0.82
KARSP3-201ENST00000571212 CCDC24Q8N4L8 307 aa9.9□□□□□ -0.82
KARSP3-201ENST00000571212 C6orf229H3BNL8 230 aa9.89□□□□□ -0.83
KARSP3-201ENST00000571212 ZBTB24O43167 697 aaPredicted RBP9.89□□□□□ -0.83
KARSP3-201ENST00000571212 CD2BP2O95400 341 aaKnown RBP9.89□□□□□ -0.83
KARSP3-201ENST00000571212 PDE4DQ08499 809 aa9.89□□□□□ -0.83
KARSP3-201ENST00000571212 TBC1D2Q9BYX2 928 aa9.88□□□□□ -0.83
KARSP3-201ENST00000571212 JUNDP17535 347 aa9.87□□□□□ -0.83
KARSP3-201ENST00000571212 RETREG3Q86VR2 466 aa9.87□□□□□ -0.83
KARSP3-201ENST00000571212 MYO15BQ96JP2 1530 aa9.86□□□□□ -0.83
KARSP3-201ENST00000571212 FAM187AA6NFU0 413 aa9.86□□□□□ -0.83
KARSP3-201ENST00000571212 PKDCCQ504Y2 493 aa9.86□□□□□ -0.83
KARSP3-201ENST00000571212 TRIM32Q13049 653 aa9.85□□□□□ -0.83
KARSP3-201ENST00000571212 MYT1Q01538 1121 aa9.84□□□□□ -0.83
KARSP3-201ENST00000571212 PTCRAQ6ISU1 281 aaPredicted RBP9.84□□□□□ -0.83
KARSP3-201ENST00000571212 PCDHB15Q9Y5E8 787 aa9.84□□□□□ -0.83
KARSP3-201ENST00000571212 BCANQ96GW7 911 aa9.83□□□□□ -0.84
KARSP3-201ENST00000571212 RSBN1LQ6PCB5 846 aaPredicted RBP9.82□□□□□ -0.84
KARSP3-201ENST00000571212 BICRAQ9NZM4 1560 aa9.82□□□□□ -0.84
KARSP3-201ENST00000571212 DGAT1O75907 488 aa9.82□□□□□ -0.84
KARSP3-201ENST00000571212 PRR7Q8TB68 274 aa9.82□□□□□ -0.84
KARSP3-201ENST00000571212 NUDT12Q9BQG2 462 aa9.82□□□□□ -0.84
KARSP3-201ENST00000571212 TOR4AQ9NXH8 423 aa9.82□□□□□ -0.84
KARSP3-201ENST00000571212 MTMR2Q13614 643 aa9.81□□□□□ -0.84
KARSP3-201ENST00000571212 CSPP1Q1MSJ5 1256 aa9.81□□□□□ -0.84
KARSP3-201ENST00000571212 SKOR1P84550 965 aa9.8□□□□□ -0.84
KARSP3-201ENST00000571212 CYP4X1Q8N118 509 aa9.8□□□□□ -0.84
KARSP3-201ENST00000571212 SPTLC1O15269 473 aa9.79□□□□□ -0.84
KARSP3-201ENST00000571212 ST8SIA5O15466 376 aa9.79□□□□□ -0.84
KARSP3-201ENST00000571212 RIC3Q7Z5B4 369 aa9.79□□□□□ -0.84
KARSP3-201ENST00000571212 CABLES1Q8TDN4 633 aa9.78□□□□□ -0.84
KARSP3-201ENST00000571212 MRGPRX2Q96LB1 330 aa9.78□□□□□ -0.84
KARSP3-201ENST00000571212 WNT7AO00755 349 aa9.77□□□□□ -0.84
KARSP3-201ENST00000571212 HRCP23327 699 aa9.77□□□□□ -0.84
KARSP3-201ENST00000571212 DIXDC1Q155Q3 683 aa9.77□□□□□ -0.84
KARSP3-201ENST00000571212 MYSM1Q5VVJ2 828 aa9.77□□□□□ -0.84
KARSP3-201ENST00000571212 LIMD1Q9UGP4 676 aa9.77□□□□□ -0.84
KARSP3-201ENST00000571212 CFAP99D6REC4 459 aa9.77□□□□□ -0.85
KARSP3-201ENST00000571212 TTC24A2A3L6 582 aaPredicted RBP9.76□□□□□ -0.85
KARSP3-201ENST00000571212 CCNYL3P0C7X3 344 aa9.76□□□□□ -0.85
KARSP3-201ENST00000571212 RC3H1Q5TC82 1133 aaKnown RBP9.76□□□□□ -0.85
KARSP3-201ENST00000571212 POTECB2RU33 542 aa9.75□□□□□ -0.85
KARSP3-201ENST00000571212 GJA5P36382 358 aa9.75□□□□□ -0.85
KARSP3-201ENST00000571212 ZNF787Q6DD87 383 aa9.75□□□□□ -0.85
KARSP3-201ENST00000571212 GPBP1L1Q9HC44 474 aaPredicted RBP9.75□□□□□ -0.85
KARSP3-201ENST00000571212 AAASQ9NRG9 546 aa9.75□□□□□ -0.85
KARSP3-201ENST00000571212 QPCTQ16769 361 aa9.74□□□□□ -0.85
KARSP3-201ENST00000571212 PTPRNQ16849 979 aa9.74□□□□□ -0.85
KARSP3-201ENST00000571212 EVA1BQ9NVM1 165 aa9.74□□□□□ -0.85
KARSP3-201ENST00000571212 SPDYE5A6NIY4 337 aa9.73□□□□□ -0.85
KARSP3-201ENST00000571212 J3QL48 77 aa9.73□□□□□ -0.85
KARSP3-201ENST00000571212 ZBTB3Q9H5J0 574 aa9.73□□□□□ -0.85
KARSP3-201ENST00000571212 DACH1Q9UI36 760 aa9.73□□□□□ -0.85
KARSP3-201ENST00000571212 SMPD1P17405 629 aa9.72□□□□□ -0.85
KARSP3-201ENST00000571212 SNIP1Q8TAD8 396 aaKnown RBP9.72□□□□□ -0.85
KARSP3-201ENST00000571212 POLR3EQ9NVU0 708 aa9.72□□□□□ -0.85
KARSP3-201ENST00000571212 WNT7BP56706 349 aa9.72□□□□□ -0.85
KARSP3-201ENST00000571212 KCNH2Q12809 1159 aa9.72□□□□□ -0.85
KARSP3-201ENST00000571212 LINC01559Q495D7 138 aa9.72□□□□□ -0.85
KARSP3-201ENST00000571212 DESI1Q6ICB0 168 aa9.72□□□□□ -0.85
KARSP3-201ENST00000571212 UNC93B1Q9H1C4 597 aa9.72□□□□□ -0.85
KARSP3-201ENST00000571212 SH3BP2P78314 561 aa9.71□□□□□ -0.86
KARSP3-201ENST00000571212 BAP1Q92560 729 aa9.71□□□□□ -0.86
KARSP3-201ENST00000571212 TSC1Q92574 1164 aa9.71□□□□□ -0.86
KARSP3-201ENST00000571212 SHROOM4Q9ULL8 1493 aa9.7□□□□□ -0.86
KARSP3-201ENST00000571212 NUTM2BA6NNL0 878 aaPredicted RBP9.7□□□□□ -0.86
KARSP3-201ENST00000571212 NUTM2EB1AL46 878 aaPredicted RBP9.7□□□□□ -0.86
KARSP3-201ENST00000571212 NUTM2DQ5VT03 806 aaPredicted RBP9.7□□□□□ -0.86
KARSP3-201ENST00000571212 LYPD8Q6UX82 237 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms