RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 RAB3GAP2Q9H2M9 1393 aa18.32■□□□□ 0.52
CTDNEP1-205ENST00000570828 SPATA31E1Q6ZUB1 1445 aa18.32■□□□□ 0.52
CTDNEP1-205ENST00000570828 RGL3Q3MIN7 710 aa18.31■□□□□ 0.52
CTDNEP1-205ENST00000570828 PHLPP1O60346 1717 aa18.31■□□□□ 0.52
CTDNEP1-205ENST00000570828 ANKRD30BQ9BXX2 1392 aa18.3■□□□□ 0.52
CTDNEP1-205ENST00000570828 JCADQ9P266 1359 aa18.3■□□□□ 0.52
CTDNEP1-205ENST00000570828 PPLO60437 1756 aa18.3■□□□□ 0.52
CTDNEP1-205ENST00000570828 BRINP3Q76B58 766 aa18.28■□□□□ 0.52
CTDNEP1-205ENST00000570828 MST1RQ04912 1400 aa18.28■□□□□ 0.52
CTDNEP1-205ENST00000570828 PRAG1Q86YV5 1406 aa18.28■□□□□ 0.52
CTDNEP1-205ENST00000570828 SETD1AO15047 1707 aaKnown RBP18.28■□□□□ 0.52
CTDNEP1-205ENST00000570828 ROBO2Q9HCK4 1378 aa18.28■□□□□ 0.52
CTDNEP1-205ENST00000570828 COL16A1Q07092 1604 aaPredicted RBP18.27■□□□□ 0.52
CTDNEP1-205ENST00000570828 AHDC1Q5TGY3 1603 aaPredicted RBP18.27■□□□□ 0.52
CTDNEP1-205ENST00000570828 ADGRF5Q8IZF2 1346 aa18.27■□□□□ 0.52
CTDNEP1-205ENST00000570828 ASXL1Q8IXJ9 1541 aa18.26■□□□□ 0.51
CTDNEP1-205ENST00000570828 NALCNQ8IZF0 1738 aa18.24■□□□□ 0.51
CTDNEP1-205ENST00000570828 PIK3C2GO75747 1445 aa18.23■□□□□ 0.51
CTDNEP1-205ENST00000570828 SPATA31A6Q5VVP1 1343 aa18.22■□□□□ 0.51
CTDNEP1-205ENST00000570828 RGS17Q9UGC6 210 aaPredicted RBP18.21■□□□□ 0.51
CTDNEP1-205ENST00000570828 IFT172Q9UG01 1749 aa18.2■□□□□ 0.5
CTDNEP1-205ENST00000570828 C1orf167Q5SNV9 1468 aa18.2■□□□□ 0.5
CTDNEP1-205ENST00000570828 LRPPRCP42704 1394 aaKnown RBP18.19■□□□□ 0.5
CTDNEP1-205ENST00000570828 STK26Q9P289 416 aa18.19■□□□□ 0.5
CTDNEP1-205ENST00000570828 TECPR2O15040 1411 aa18.18■□□□□ 0.5
CTDNEP1-205ENST00000570828 MYOM2P54296 1465 aa18.18■□□□□ 0.5
CTDNEP1-205ENST00000570828 ATXN8OSP0DMR3 200 aa18.17■□□□□ 0.5
CTDNEP1-205ENST00000570828 HRCP23327 699 aa18.17■□□□□ 0.5
CTDNEP1-205ENST00000570828 MEX3CQ5U5Q3 659 aaKnown RBP18.17■□□□□ 0.5
CTDNEP1-205ENST00000570828 LRP6O75581 1613 aa18.16■□□□□ 0.5
CTDNEP1-205ENST00000570828 SHPRHQ149N8 1683 aa18.16■□□□□ 0.5
CTDNEP1-205ENST00000570828 TMEM132EQ6IEE7 984 aa18.16■□□□□ 0.5
CTDNEP1-205ENST00000570828 NHSL1Q5SYE7 1610 aa18.16■□□□□ 0.5
CTDNEP1-205ENST00000570828 ABCC11Q96J66 1382 aa18.16■□□□□ 0.5
CTDNEP1-205ENST00000570828 NRXN1Q9ULB1 1477 aa18.15■□□□□ 0.5
CTDNEP1-205ENST00000570828 LRRC59Q96AG4 307 aaKnown RBP18.15■□□□□ 0.5
CTDNEP1-205ENST00000570828 CDC42BPGQ6DT37 1551 aa18.15■□□□□ 0.5
CTDNEP1-205ENST00000570828 YTHDC2Q9H6S0 1430 aaKnown RBP18.15■□□□□ 0.5
CTDNEP1-205ENST00000570828 ZBTB22O15209 634 aa18.14■□□□□ 0.49
CTDNEP1-205ENST00000570828 DDX17Q92841 729 aaKnown RBP18.14■□□□□ 0.49
CTDNEP1-205ENST00000570828 SPDYE2BA6NHP3 402 aa18.13■□□□□ 0.49
CTDNEP1-205ENST00000570828 SPDYE6P0CI01 402 aa18.13■□□□□ 0.49
CTDNEP1-205ENST00000570828 SPDYE2Q495Y8 402 aa18.13■□□□□ 0.49
CTDNEP1-205ENST00000570828 POTEAQ6S8J7 498 aa18.13■□□□□ 0.49
CTDNEP1-205ENST00000570828 C14orf93Q9H972 538 aaKnown RBP18.13■□□□□ 0.49
CTDNEP1-205ENST00000570828 NUTM2BA6NNL0 878 aaPredicted RBP18.12■□□□□ 0.49
CTDNEP1-205ENST00000570828 NUTM2EB1AL46 878 aaPredicted RBP18.12■□□□□ 0.49
CTDNEP1-205ENST00000570828 WAPLQ7Z5K2 1190 aa18.12■□□□□ 0.49
CTDNEP1-205ENST00000570828 NUTM2AQ8IVF1 878 aaPredicted RBP18.12■□□□□ 0.49
CTDNEP1-205ENST00000570828 ORAI2Q96SN7 254 aa18.12■□□□□ 0.49
CTDNEP1-205ENST00000570828 LAMC1P11047 1609 aa18.12■□□□□ 0.49
CTDNEP1-205ENST00000570828 CFAP70Q5T0N1 1121 aa18.11■□□□□ 0.49
CTDNEP1-205ENST00000570828 DHX57Q6P158 1386 aaKnown RBP18.11■□□□□ 0.49
CTDNEP1-205ENST00000570828 PLEKHH1Q9ULM0 1364 aa18.11■□□□□ 0.49
CTDNEP1-205ENST00000570828 KNDC1Q76NI1 1749 aa18.11■□□□□ 0.49
CTDNEP1-205ENST00000570828 PNPLA6Q8IY17 1366 aa18.1■□□□□ 0.49
CTDNEP1-205ENST00000570828 ESCO1Q5FWF5 840 aa18.08■□□□□ 0.48
CTDNEP1-205ENST00000570828 ZNF772Q68DY9 489 aaPredicted RBP18.08■□□□□ 0.48
CTDNEP1-205ENST00000570828 SOS2Q07890 1332 aaPredicted RBP18.07■□□□□ 0.48
CTDNEP1-205ENST00000570828 SIRT1Q96EB6 747 aa18.07■□□□□ 0.48
CTDNEP1-205ENST00000570828 NPHP3Q7Z494 1330 aa18.06■□□□□ 0.48
CTDNEP1-205ENST00000570828 DCAF11Q8TEB1 546 aa18.06■□□□□ 0.48
CTDNEP1-205ENST00000570828 NUTM2FA1L443 756 aa18.05■□□□□ 0.48
CTDNEP1-205ENST00000570828 EVX2Q03828 476 aa18.05■□□□□ 0.48
CTDNEP1-205ENST00000570828 KDM2AQ9Y2K7 1162 aa18.05■□□□□ 0.48
CTDNEP1-205ENST00000570828 STAC3Q96MF2 364 aa18.04■□□□□ 0.48
CTDNEP1-205ENST00000570828 PRAM1Q96QH2 718 aa18.03■□□□□ 0.48
CTDNEP1-205ENST00000570828 DLC1Q96QB1 1528 aa18.03■□□□□ 0.48
CTDNEP1-205ENST00000570828 ADGRB1O14514 1584 aa18.02■□□□□ 0.48
CTDNEP1-205ENST00000570828 SAFB2Q14151 953 aaKnown RBP eCLIP18.02■□□□□ 0.48
CTDNEP1-205ENST00000570828 POGKQ9P215 609 aa18.02■□□□□ 0.48
CTDNEP1-205ENST00000570828 AFF2P51816 1311 aa18.01■□□□□ 0.47
CTDNEP1-205ENST00000570828 FOXO3O43524 673 aa18.01■□□□□ 0.47
CTDNEP1-205ENST00000570828 C8orf37Q96NL8 207 aa18.01■□□□□ 0.47
CTDNEP1-205ENST00000570828 PXDNQ92626 1479 aa18.01■□□□□ 0.47
CTDNEP1-205ENST00000570828 XPCQ01831 940 aaPredicted RBP18■□□□□ 0.47
CTDNEP1-205ENST00000570828 FMN2Q9NZ56 1722 aa18■□□□□ 0.47
CTDNEP1-205ENST00000570828 ADAMTS2O95450 1211 aa17.99■□□□□ 0.47
CTDNEP1-205ENST00000570828 TRAK1Q9UPV9 953 aa17.98■□□□□ 0.47
CTDNEP1-205ENST00000570828 KIF1AQ12756 1690 aa17.96■□□□□ 0.47
CTDNEP1-205ENST00000570828 RXRBP28702 533 aa17.96■□□□□ 0.47
CTDNEP1-205ENST00000570828 NGLY1Q96IV0 654 aa17.96■□□□□ 0.47
CTDNEP1-205ENST00000570828 COL22A1Q8NFW1 1626 aaPredicted RBP17.95■□□□□ 0.46
CTDNEP1-205ENST00000570828 PRKAR2AP13861 404 aaKnown RBP17.95■□□□□ 0.46
CTDNEP1-205ENST00000570828 SPDYE1Q8NFV5 336 aaPredicted RBP17.95■□□□□ 0.46
CTDNEP1-205ENST00000570828 ADGRB2O60241 1585 aa17.95■□□□□ 0.46
CTDNEP1-205ENST00000570828 PHF8Q9UPP1 1060 aa17.94■□□□□ 0.46
CTDNEP1-205ENST00000570828 CLEC11AQ9Y240 323 aa17.94■□□□□ 0.46
CTDNEP1-205ENST00000570828 ANKARQ7Z5J8 1434 aa17.94■□□□□ 0.46
CTDNEP1-205ENST00000570828 EIF3AQ14152 1382 aaKnown RBP17.93■□□□□ 0.46
CTDNEP1-205ENST00000570828 HIRIP3Q9BW71 556 aaPredicted RBP17.93■□□□□ 0.46
CTDNEP1-205ENST00000570828 MINK1Q8N4C8 1332 aaPredicted RBP17.93■□□□□ 0.46
CTDNEP1-205ENST00000570828 CDK12Q9NYV4 1490 aaPredicted RBP17.92■□□□□ 0.46
CTDNEP1-205ENST00000570828 KRT28Q7Z3Y7 464 aa17.91■□□□□ 0.46
CTDNEP1-205ENST00000570828 QTRT2Q9H974 415 aaKnown RBP17.91■□□□□ 0.46
CTDNEP1-205ENST00000570828 SPATA31A3Q5VYP0 1347 aa17.91■□□□□ 0.46
CTDNEP1-205ENST00000570828 PSME1Q06323 249 aa17.9■□□□□ 0.46
CTDNEP1-205ENST00000570828 USP21Q9UK80 565 aa17.9■□□□□ 0.46
CTDNEP1-205ENST00000570828 RBM6P78332 1123 aaKnown RBP17.89■□□□□ 0.45
CTDNEP1-205ENST00000570828 TNS3Q68CZ2 1445 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms