RNA–Protein interactions for RNA: ENST00000569053.5

TMX3-210, Transcript of thioredoxin related transmembrane protein 3, humanhuman

TSL 1 (best)

Gene TMX3, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX3-210ENST00000569053 PRAG1Q86YV5 1406 aa16.49■□□□□ 0.23
TMX3-210ENST00000569053 SOS2Q07890 1332 aaPredicted RBP16.48■□□□□ 0.23
TMX3-210ENST00000569053 ADAMTS2O95450 1211 aa16.48■□□□□ 0.23
TMX3-210ENST00000569053 QTRT2Q9H974 415 aaKnown RBP16.48■□□□□ 0.23
TMX3-210ENST00000569053 VGFO15240 615 aaPredicted RBP16.47■□□□□ 0.23
TMX3-210ENST00000569053 ADGRF5Q8IZF2 1346 aa16.46■□□□□ 0.23
TMX3-210ENST00000569053 PPP4R3CPQ6ZMV5 832 aa16.46■□□□□ 0.23
TMX3-210ENST00000569053 SLC4A1APQ9BWU0 796 aaKnown RBP16.46■□□□□ 0.23
TMX3-210ENST00000569053 RPGRIP1LQ68CZ1 1315 aa16.44■□□□□ 0.22
TMX3-210ENST00000569053 RBM6P78332 1123 aaKnown RBP16.43■□□□□ 0.22
TMX3-210ENST00000569053 COL22A1Q8NFW1 1626 aaPredicted RBP16.42■□□□□ 0.22
TMX3-210ENST00000569053 WAPLQ7Z5K2 1190 aa16.42■□□□□ 0.22
TMX3-210ENST00000569053 NGLY1Q96IV0 654 aa16.42■□□□□ 0.22
TMX3-210ENST00000569053 PLEKHH1Q9ULM0 1364 aa16.41■□□□□ 0.22
TMX3-210ENST00000569053 XPCQ01831 940 aaPredicted RBP16.41■□□□□ 0.22
TMX3-210ENST00000569053 SPATA31E1Q6ZUB1 1445 aa16.41■□□□□ 0.22
TMX3-210ENST00000569053 IFT172Q9UG01 1749 aa16.41■□□□□ 0.22
TMX3-210ENST00000569053 PXDNQ92626 1479 aa16.41■□□□□ 0.22
TMX3-210ENST00000569053 MYOM2P54296 1465 aa16.4■□□□□ 0.22
TMX3-210ENST00000569053 CDC42BPGQ6DT37 1551 aa16.39■□□□□ 0.21
TMX3-210ENST00000569053 NUTM2FA1L443 756 aa16.39■□□□□ 0.21
TMX3-210ENST00000569053 RGL3Q3MIN7 710 aa16.39■□□□□ 0.21
TMX3-210ENST00000569053 TMEM132EQ6IEE7 984 aa16.39■□□□□ 0.21
TMX3-210ENST00000569053 FNBP4Q8N3X1 1017 aaPredicted RBP16.39■□□□□ 0.21
TMX3-210ENST00000569053 USP21Q9UK80 565 aa16.39■□□□□ 0.21
TMX3-210ENST00000569053 ESCO1Q5FWF5 840 aa16.38■□□□□ 0.21
TMX3-210ENST00000569053 STK26Q9P289 416 aa16.38■□□□□ 0.21
TMX3-210ENST00000569053 ATRNO75882 1429 aa16.37■□□□□ 0.21
TMX3-210ENST00000569053 FOXO3O43524 673 aa16.37■□□□□ 0.21
TMX3-210ENST00000569053 TECPR2O15040 1411 aa16.36■□□□□ 0.21
TMX3-210ENST00000569053 BCL9LQ86UU0 1499 aa16.36■□□□□ 0.21
TMX3-210ENST00000569053 MPHOSPH9Q99550 1183 aa16.35■□□□□ 0.21
TMX3-210ENST00000569053 MARF1Q9Y4F3 1742 aaKnown RBP16.35■□□□□ 0.21
TMX3-210ENST00000569053 LRPPRCP42704 1394 aaKnown RBP16.35■□□□□ 0.21
TMX3-210ENST00000569053 KNDC1Q76NI1 1749 aa16.33■□□□□ 0.21
TMX3-210ENST00000569053 RGPD8O14715 1765 aaPredicted RBP16.33■□□□□ 0.21
TMX3-210ENST00000569053 TRPC5Q9UL62 973 aaPredicted RBP16.33■□□□□ 0.2
TMX3-210ENST00000569053 ABCC11Q96J66 1382 aa16.33■□□□□ 0.2
TMX3-210ENST00000569053 CCDC144AA2RUR9 1427 aa16.33■□□□□ 0.2
TMX3-210ENST00000569053 PIK3C2GO75747 1445 aa16.33■□□□□ 0.2
TMX3-210ENST00000569053 FMN2Q9NZ56 1722 aa16.33■□□□□ 0.2
TMX3-210ENST00000569053 NPHP3Q7Z494 1330 aa16.32■□□□□ 0.2
TMX3-210ENST00000569053 RNF216Q9NWF9 866 aaPredicted RBP16.32■□□□□ 0.2
TMX3-210ENST00000569053 EP400Q96L91 3159 aa16.31■□□□□ 0.2
TMX3-210ENST00000569053 YTHDC2Q9H6S0 1430 aaKnown RBP16.3■□□□□ 0.2
TMX3-210ENST00000569053 SRCAPQ6ZRS2 3230 aa16.3■□□□□ 0.2
TMX3-210ENST00000569053 ANKRD30BQ9BXX2 1392 aa16.29■□□□□ 0.2
TMX3-210ENST00000569053 GLI3P10071 1580 aa16.29■□□□□ 0.2
TMX3-210ENST00000569053 ATAD2Q6PL18 1390 aa16.28■□□□□ 0.2
TMX3-210ENST00000569053 SPATA31A3Q5VYP0 1347 aa16.28■□□□□ 0.2
TMX3-210ENST00000569053 CFAP70Q5T0N1 1121 aa16.27■□□□□ 0.2
TMX3-210ENST00000569053 C14orf93Q9H972 538 aaKnown RBP16.27■□□□□ 0.2
TMX3-210ENST00000569053 SLIT2O94813 1529 aa16.27■□□□□ 0.2
TMX3-210ENST00000569053 NRXN1Q9ULB1 1477 aa16.27■□□□□ 0.19
TMX3-210ENST00000569053 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.26■□□□□ 0.19
TMX3-210ENST00000569053 CNKSR2Q8WXI2 1034 aa16.26■□□□□ 0.19
TMX3-210ENST00000569053 GJD4Q96KN9 370 aaPredicted RBP16.26■□□□□ 0.19
TMX3-210ENST00000569053 BRWD3Q6RI45 1802 aa16.25■□□□□ 0.19
TMX3-210ENST00000569053 KRT28Q7Z3Y7 464 aa16.25■□□□□ 0.19
TMX3-210ENST00000569053 CABLES1Q8TDN4 633 aa16.25■□□□□ 0.19
TMX3-210ENST00000569053 USP32Q8NFA0 1604 aa16.24■□□□□ 0.19
TMX3-210ENST00000569053 KIF1AQ12756 1690 aa16.24■□□□□ 0.19
TMX3-210ENST00000569053 RALGAPBQ86X10 1494 aa16.23■□□□□ 0.19
TMX3-210ENST00000569053 NCBP3Q53F19 620 aaKnown RBP16.23■□□□□ 0.19
TMX3-210ENST00000569053 SIRT1Q96EB6 747 aa16.23■□□□□ 0.19
TMX3-210ENST00000569053 SAFB2Q14151 953 aaKnown RBP eCLIP16.22■□□□□ 0.19
TMX3-210ENST00000569053 UNC5CLQ8IV45 518 aa16.22■□□□□ 0.19
TMX3-210ENST00000569053 ABCA3Q99758 1704 aa16.22■□□□□ 0.19
TMX3-210ENST00000569053 PLEKHG5O94827 1062 aa16.21■□□□□ 0.19
TMX3-210ENST00000569053 PHF8Q9UPP1 1060 aa16.21■□□□□ 0.19
TMX3-210ENST00000569053 PRAM1Q96QH2 718 aa16.2■□□□□ 0.18
TMX3-210ENST00000569053 TNS3Q68CZ2 1445 aa16.19■□□□□ 0.18
TMX3-210ENST00000569053 PLCH1Q4KWH8 1693 aa16.19■□□□□ 0.18
TMX3-210ENST00000569053 ADGRB1O14514 1584 aa16.18■□□□□ 0.18
TMX3-210ENST00000569053 DHX57Q6P158 1386 aaKnown RBP16.17■□□□□ 0.18
TMX3-210ENST00000569053 PMFBP1Q8TBY8 1022 aa16.17■□□□□ 0.18
TMX3-210ENST00000569053 PRR36Q9H6K5 1346 aa16.17■□□□□ 0.18
TMX3-210ENST00000569053 TRPM3Q9HCF6 1732 aaPredicted RBP16.16■□□□□ 0.18
TMX3-210ENST00000569053 FAM83GA6ND36 823 aa16.16■□□□□ 0.18
TMX3-210ENST00000569053 DEFB132Q7Z7B7 95 aa16.16■□□□□ 0.18
TMX3-210ENST00000569053 SBNO1A3KN83 1393 aa16.15■□□□□ 0.18
TMX3-210ENST00000569053 DLC1Q96QB1 1528 aa16.15■□□□□ 0.18
TMX3-210ENST00000569053 SEPT12Q8IYM1 358 aa16.15■□□□□ 0.18
TMX3-210ENST00000569053 RAB3GAP2Q9H2M9 1393 aa16.14■□□□□ 0.17
TMX3-210ENST00000569053 VPS72Q15906 364 aa16.14■□□□□ 0.17
TMX3-210ENST00000569053 HIRIP3Q9BW71 556 aaPredicted RBP16.14■□□□□ 0.17
TMX3-210ENST00000569053 ZRANB1Q9UGI0 708 aa16.14■□□□□ 0.17
TMX3-210ENST00000569053 NRAPQ86VF7 1730 aa16.14■□□□□ 0.17
TMX3-210ENST00000569053 NWD2Q9ULI1 1742 aa16.14■□□□□ 0.17
TMX3-210ENST00000569053 ADGRB2O60241 1585 aa16.13■□□□□ 0.17
TMX3-210ENST00000569053 ONECUT3O60422 494 aaPredicted RBP16.13■□□□□ 0.17
TMX3-210ENST00000569053 CCDC125Q86Z20 511 aa16.13■□□□□ 0.17
TMX3-210ENST00000569053 TRAK1Q9UPV9 953 aa16.13■□□□□ 0.17
TMX3-210ENST00000569053 ALS2Q96Q42 1657 aa16.13■□□□□ 0.17
TMX3-210ENST00000569053 BLMP54132 1417 aaPredicted RBP16.12■□□□□ 0.17
TMX3-210ENST00000569053 PSME1Q06323 249 aa16.12■□□□□ 0.17
TMX3-210ENST00000569053 LMOD2Q6P5Q4 547 aa16.12■□□□□ 0.17
TMX3-210ENST00000569053 CRYBG1Q9Y4K1 1723 aa16.11■□□□□ 0.17
TMX3-210ENST00000569053 MINK1Q8N4C8 1332 aaPredicted RBP16.11■□□□□ 0.17
TMX3-210ENST00000569053 ANKARQ7Z5J8 1434 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms