RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 ZBTB3Q9H5J0 574 aa10.17□□□□□ -0.78
SHCBP1-206ENST00000567698 CFAP99D6REC4 459 aa10.16□□□□□ -0.78
SHCBP1-206ENST00000567698 MTMR2Q13614 643 aa10.16□□□□□ -0.78
SHCBP1-206ENST00000567698 BRICD5Q6PL45 260 aa10.16□□□□□ -0.78
SHCBP1-206ENST00000567698 NYAP1Q6ZVC0 841 aa10.16□□□□□ -0.78
SHCBP1-206ENST00000567698 SCUBE3Q8IX30 993 aa10.16□□□□□ -0.78
SHCBP1-206ENST00000567698 SALL2Q9Y467 1007 aaPredicted RBP10.16□□□□□ -0.78
SHCBP1-206ENST00000567698 MCM6Q14566 821 aa10.14□□□□□ -0.79
SHCBP1-206ENST00000567698 TJAP1Q5JTD0 557 aa10.14□□□□□ -0.79
SHCBP1-206ENST00000567698 RNF166Q96A37 237 aaPredicted RBP10.14□□□□□ -0.79
SHCBP1-206ENST00000567698 BANK1Q8NDB2 785 aa10.12□□□□□ -0.79
SHCBP1-206ENST00000567698 MTRQ99707 1265 aa10.12□□□□□ -0.79
SHCBP1-206ENST00000567698 SNRKQ9NRH2 765 aa10.12□□□□□ -0.79
SHCBP1-206ENST00000567698 SPDYE5A6NIY4 337 aa10.11□□□□□ -0.79
SHCBP1-206ENST00000567698 C6orf229H3BNL8 230 aa10.11□□□□□ -0.79
SHCBP1-206ENST00000567698 NR1I2O75469 434 aa10.11□□□□□ -0.79
SHCBP1-206ENST00000567698 COPS2P61201 443 aa10.11□□□□□ -0.79
SHCBP1-206ENST00000567698 TMEM259Q4ZIN3 620 aa10.11□□□□□ -0.79
SHCBP1-206ENST00000567698 RETREG3Q86VR2 466 aa10.11□□□□□ -0.79
SHCBP1-206ENST00000567698 NUTM2BA6NNL0 878 aaPredicted RBP10.1□□□□□ -0.79
SHCBP1-206ENST00000567698 NUTM2EB1AL46 878 aaPredicted RBP10.1□□□□□ -0.79
SHCBP1-206ENST00000567698 MMRN1Q13201 1228 aa10.1□□□□□ -0.79
SHCBP1-206ENST00000567698 Q3C1V9 767 aa10.1□□□□□ -0.79
SHCBP1-206ENST00000567698 NUTM2DQ5VT03 806 aaPredicted RBP10.1□□□□□ -0.79
SHCBP1-206ENST00000567698 NUTM2AQ8IVF1 878 aaPredicted RBP10.1□□□□□ -0.79
SHCBP1-206ENST00000567698 FAM160A2Q8N612 972 aaPredicted RBP10.1□□□□□ -0.79
SHCBP1-206ENST00000567698 ZNF516Q92618 1163 aa10.1□□□□□ -0.79
SHCBP1-206ENST00000567698 ATP1B4Q9UN42 357 aaPredicted RBP10.1□□□□□ -0.79
SHCBP1-206ENST00000567698 TLL1O43897 1013 aa10.09□□□□□ -0.79
SHCBP1-206ENST00000567698 FLIIQ13045 1269 aa10.09□□□□□ -0.79
SHCBP1-206ENST00000567698 MTMR14Q8NCE2 650 aa10.09□□□□□ -0.79
SHCBP1-206ENST00000567698 PRR7Q8TB68 274 aa10.09□□□□□ -0.79
SHCBP1-206ENST00000567698 ZPR1O75312 459 aa10.08□□□□□ -0.8
SHCBP1-206ENST00000567698 CTDSPL2Q05D32 466 aa10.08□□□□□ -0.8
SHCBP1-206ENST00000567698 AP1G2O75843 785 aa10.07□□□□□ -0.8
SHCBP1-206ENST00000567698 FMNL1O95466 1100 aaPredicted RBP10.07□□□□□ -0.8
SHCBP1-206ENST00000567698 USP17L8P0C7I0 530 aa10.07□□□□□ -0.8
SHCBP1-206ENST00000567698 USB1Q9BQ65 265 aaKnown RBP10.07□□□□□ -0.8
SHCBP1-206ENST00000567698 PER1O15534 1290 aaPredicted RBP10.06□□□□□ -0.8
SHCBP1-206ENST00000567698 DESI1Q6ICB0 168 aa10.06□□□□□ -0.8
SHCBP1-206ENST00000567698 IL21Q9HBE4 155 aa10.06□□□□□ -0.8
SHCBP1-206ENST00000567698 HCSTQ9UBK5 93 aa10.06□□□□□ -0.8
SHCBP1-206ENST00000567698 SOCS7O14512 581 aa10.05□□□□□ -0.8
SHCBP1-206ENST00000567698 MSS51Q4VC12 460 aa10.05□□□□□ -0.8
SHCBP1-206ENST00000567698 C14orf37Q86TY3 774 aa10.05□□□□□ -0.8
SHCBP1-206ENST00000567698 GJD4Q96KN9 370 aaPredicted RBP10.05□□□□□ -0.8
SHCBP1-206ENST00000567698 HMX1Q9NP08 348 aaPredicted RBP10.05□□□□□ -0.8
SHCBP1-206ENST00000567698 GPR37L1O60883 481 aa10.04□□□□□ -0.8
SHCBP1-206ENST00000567698 ITGBL1O95965 494 aaPredicted RBP10.04□□□□□ -0.8
SHCBP1-206ENST00000567698 ADH1BP00325 375 aa10.04□□□□□ -0.8
SHCBP1-206ENST00000567698 LRRN4Q8WUT4 740 aa10.04□□□□□ -0.8
SHCBP1-206ENST00000567698 SPSB2Q99619 263 aa10.04□□□□□ -0.8
SHCBP1-206ENST00000567698 PRDM9Q9NQV7 894 aa10.04□□□□□ -0.8
SHCBP1-206ENST00000567698 NKX2-3Q8TAU0 364 aa10.03□□□□□ -0.8
SHCBP1-206ENST00000567698 TRIM34Q9BYJ4 488 aa10.03□□□□□ -0.8
SHCBP1-206ENST00000567698 DXOO77932 396 aaKnown RBP10.02□□□□□ -0.81
SHCBP1-206ENST00000567698 MMP16P51512 607 aa10.02□□□□□ -0.81
SHCBP1-206ENST00000567698 LYPD8Q6UX82 237 aa10.02□□□□□ -0.81
SHCBP1-206ENST00000567698 POM121Q96HA1 1249 aa10.02□□□□□ -0.81
SHCBP1-206ENST00000567698 JUNDP17535 347 aa10.01□□□□□ -0.81
SHCBP1-206ENST00000567698 HELBQ8NG08 1087 aaPredicted RBP10.01□□□□□ -0.81
SHCBP1-206ENST00000567698 ERICH6Q7L0X2 663 aa10□□□□□ -0.81
SHCBP1-206ENST00000567698 EPS8L1Q8TE68 723 aa10□□□□□ -0.81
SHCBP1-206ENST00000567698 CLUAP1Q96AJ1 413 aa10□□□□□ -0.81
SHCBP1-206ENST00000567698 COG6Q9Y2V7 657 aa10□□□□□ -0.81
SHCBP1-206ENST00000567698 F12P00748 615 aaPredicted RBP9.99□□□□□ -0.81
SHCBP1-206ENST00000567698 TSC1Q92574 1164 aa9.98□□□□□ -0.81
SHCBP1-206ENST00000567698 ZMYND15Q9H091 742 aa9.98□□□□□ -0.81
SHCBP1-206ENST00000567698 PTPRNQ16849 979 aa9.97□□□□□ -0.81
SHCBP1-206ENST00000567698 A6NJR5 290 aa9.96□□□□□ -0.82
SHCBP1-206ENST00000567698 FNBP4Q8N3X1 1017 aaPredicted RBP9.96□□□□□ -0.82
SHCBP1-206ENST00000567698 UBTFP17480 764 aaKnown RBP9.95□□□□□ -0.82
SHCBP1-206ENST00000567698 TBC1D2BQ9UPU7 963 aa9.95□□□□□ -0.82
SHCBP1-206ENST00000567698 S1PR4O95977 384 aa9.94□□□□□ -0.82
SHCBP1-206ENST00000567698 KCNC4Q03721 635 aa9.94□□□□□ -0.82
SHCBP1-206ENST00000567698 NR6A1Q15406 480 aa9.94□□□□□ -0.82
SHCBP1-206ENST00000567698 SLC6A16Q9GZN6 736 aa9.94□□□□□ -0.82
SHCBP1-206ENST00000567698 GDPD2Q9HCC8 539 aa9.93□□□□□ -0.82
SHCBP1-206ENST00000567698 MAP10Q9P2G4 905 aa9.93□□□□□ -0.82
SHCBP1-206ENST00000567698 IRF5Q13568 498 aa9.92□□□□□ -0.82
SHCBP1-206ENST00000567698 EVA1BQ9NVM1 165 aa9.92□□□□□ -0.82
SHCBP1-206ENST00000567698 CCNYL3P0C7X3 344 aa9.91□□□□□ -0.82
SHCBP1-206ENST00000567698 PTCRAQ6ISU1 281 aaPredicted RBP9.9□□□□□ -0.82
SHCBP1-206ENST00000567698 NUDT12Q9BQG2 462 aa9.9□□□□□ -0.82
SHCBP1-206ENST00000567698 KCNH2Q12809 1159 aa9.89□□□□□ -0.83
SHCBP1-206ENST00000567698 IFFO2Q5TF58 517 aa9.89□□□□□ -0.83
SHCBP1-206ENST00000567698 NDUFB9Q9Y6M9 179 aa9.89□□□□□ -0.83
SHCBP1-206ENST00000567698 PPEF1O14829 653 aaPredicted RBP9.88□□□□□ -0.83
SHCBP1-206ENST00000567698 PROSER2Q86WR7 435 aaPredicted RBP9.88□□□□□ -0.83
SHCBP1-206ENST00000567698 RNF223E7ERA6 249 aa9.87□□□□□ -0.83
SHCBP1-206ENST00000567698 TRAK2O60296 914 aa9.87□□□□□ -0.83
SHCBP1-206ENST00000567698 PLA2G2CQ5R387 149 aa9.87□□□□□ -0.83
SHCBP1-206ENST00000567698 APBB1O00213 710 aa9.86□□□□□ -0.83
SHCBP1-206ENST00000567698 C1orf115Q9H7X2 142 aa9.86□□□□□ -0.83
SHCBP1-206ENST00000567698 FCF1Q9Y324 198 aaKnown RBP9.86□□□□□ -0.83
SHCBP1-206ENST00000567698 PPP1R18Q6NYC8 613 aa9.85□□□□□ -0.83
SHCBP1-206ENST00000567698 EMID1Q96A84 441 aaPredicted RBP9.85□□□□□ -0.83
SHCBP1-206ENST00000567698 RAD21O60216 631 aa9.84□□□□□ -0.83
SHCBP1-206ENST00000567698 ABL2P42684 1182 aa9.84□□□□□ -0.83
SHCBP1-206ENST00000567698 FKBPLQ9UIM3 349 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms