RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 NUTM2DQ5VT03 806 aaPredicted RBP15.56■□□□□ 0.08
LINC00564-201ENST00000567258 TMEM94Q12767 1356 aa15.56■□□□□ 0.08
LINC00564-201ENST00000567258 ALKQ9UM73 1620 aa15.55■□□□□ 0.08
LINC00564-201ENST00000567258 NWD1Q149M9 1564 aa15.55■□□□□ 0.08
LINC00564-201ENST00000567258 NAIPQ13075 1403 aa15.55■□□□□ 0.08
LINC00564-201ENST00000567258 CCDC61Q9Y6R9 512 aa15.55■□□□□ 0.08
LINC00564-201ENST00000567258 DIP2AQ14689 1571 aa15.54■□□□□ 0.08
LINC00564-201ENST00000567258 MSH6P52701 1360 aa15.54■□□□□ 0.08
LINC00564-201ENST00000567258 TBX22Q9Y458 520 aa15.54■□□□□ 0.08
LINC00564-201ENST00000567258 C14orf37Q86TY3 774 aa15.53■□□□□ 0.08
LINC00564-201ENST00000567258 POTEMA6NI47 508 aa15.52■□□□□ 0.08
LINC00564-201ENST00000567258 HFM1A2PYH4 1435 aa15.51■□□□□ 0.07
LINC00564-201ENST00000567258 POTEJP0CG39 1038 aa15.51■□□□□ 0.07
LINC00564-201ENST00000567258 RBM33Q96EV2 1170 aaKnown RBP15.51■□□□□ 0.07
LINC00564-201ENST00000567258 TRPM2O94759 1503 aa15.51■□□□□ 0.07
LINC00564-201ENST00000567258 MED1Q15648 1581 aaPredicted RBP15.5■□□□□ 0.07
LINC00564-201ENST00000567258 ILDR2Q71H61 639 aa15.5■□□□□ 0.07
LINC00564-201ENST00000567258 PIK3R4Q99570 1358 aa15.49■□□□□ 0.07
LINC00564-201ENST00000567258 KIF12Q96FN5 646 aa15.49■□□□□ 0.07
LINC00564-201ENST00000567258 CLTCL1P53675 1640 aa15.49■□□□□ 0.07
LINC00564-201ENST00000567258 ROBO1Q9Y6N7 1651 aa15.48■□□□□ 0.07
LINC00564-201ENST00000567258 ATN1P54259 1190 aaPredicted RBP15.48■□□□□ 0.07
LINC00564-201ENST00000567258 POTEGQ6S5H5 508 aa15.48■□□□□ 0.07
LINC00564-201ENST00000567258 FAM135BQ49AJ0 1406 aa15.48■□□□□ 0.07
LINC00564-201ENST00000567258 ADAMTS13Q76LX8 1427 aa15.46■□□□□ 0.07
LINC00564-201ENST00000567258 NCOA3Q9Y6Q9 1424 aa15.46■□□□□ 0.07
LINC00564-201ENST00000567258 SOCS7O14512 581 aa15.45■□□□□ 0.06
LINC00564-201ENST00000567258 ATF3P18847 181 aa15.45■□□□□ 0.06
LINC00564-201ENST00000567258 SLAIN2Q9P270 581 aa15.45■□□□□ 0.06
LINC00564-201ENST00000567258 AMOTL2Q9Y2J4 779 aa15.45■□□□□ 0.06
LINC00564-201ENST00000567258 PLEKHG5O94827 1062 aa15.44■□□□□ 0.06
LINC00564-201ENST00000567258 MAMSTRQ6ZN01 415 aa15.44■□□□□ 0.06
LINC00564-201ENST00000567258 MIER1Q8N108 512 aa15.44■□□□□ 0.06
LINC00564-201ENST00000567258 ACIN1Q9UKV3 1341 aaKnown RBP15.43■□□□□ 0.06
LINC00564-201ENST00000567258 PHLPP1O60346 1717 aa15.43■□□□□ 0.06
LINC00564-201ENST00000567258 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.43■□□□□ 0.06
LINC00564-201ENST00000567258 VGFO15240 615 aaPredicted RBP15.43■□□□□ 0.06
LINC00564-201ENST00000567258 CADPS2Q86UW7 1296 aa15.43■□□□□ 0.06
LINC00564-201ENST00000567258 SETBP1Q9Y6X0 1596 aa15.43■□□□□ 0.06
LINC00564-201ENST00000567258 C19orf44Q9H6X5 657 aa15.42■□□□□ 0.06
LINC00564-201ENST00000567258 NRXN3Q9Y4C0 1643 aa15.41■□□□□ 0.06
LINC00564-201ENST00000567258 NEXMIFQ5QGS0 1516 aa15.41■□□□□ 0.06
LINC00564-201ENST00000567258 BMP2KQ9NSY1 1161 aaPredicted RBP15.4■□□□□ 0.06
LINC00564-201ENST00000567258 TRPC6Q9Y210 931 aa15.4■□□□□ 0.06
LINC00564-201ENST00000567258 RPGRIP1LQ68CZ1 1315 aa15.4■□□□□ 0.06
LINC00564-201ENST00000567258 MAP3K13O43283 966 aa15.39■□□□□ 0.05
LINC00564-201ENST00000567258 PPLO60437 1756 aa15.39■□□□□ 0.05
LINC00564-201ENST00000567258 XRN1Q8IZH2 1706 aaKnown RBP15.38■□□□□ 0.05
LINC00564-201ENST00000567258 RASEFQ8IZ41 740 aa15.38■□□□□ 0.05
LINC00564-201ENST00000567258 CCDC144AA2RUR9 1427 aa15.37■□□□□ 0.05
LINC00564-201ENST00000567258 PTPRUQ92729 1446 aa15.37■□□□□ 0.05
LINC00564-201ENST00000567258 MPHOSPH9Q99550 1183 aa15.36■□□□□ 0.05
LINC00564-201ENST00000567258 METP08581 1390 aa15.36■□□□□ 0.05
LINC00564-201ENST00000567258 DCCP43146 1447 aa15.34■□□□□ 0.05
LINC00564-201ENST00000567258 SCUBE2Q9NQ36 999 aa15.34■□□□□ 0.05
LINC00564-201ENST00000567258 SETD5Q9C0A6 1442 aa15.34■□□□□ 0.05
LINC00564-201ENST00000567258 POTEFA5A3E0 1075 aa15.33■□□□□ 0.04
LINC00564-201ENST00000567258 RGL3Q3MIN7 710 aa15.33■□□□□ 0.04
LINC00564-201ENST00000567258 JCADQ9P266 1359 aa15.33■□□□□ 0.04
LINC00564-201ENST00000567258 TIE1P35590 1138 aa15.32■□□□□ 0.04
LINC00564-201ENST00000567258 SETD1AO15047 1707 aaKnown RBP15.3■□□□□ 0.04
LINC00564-201ENST00000567258 COL16A1Q07092 1604 aaPredicted RBP15.3■□□□□ 0.04
LINC00564-201ENST00000567258 NALCNQ8IZF0 1738 aa15.3■□□□□ 0.04
LINC00564-201ENST00000567258 AHDC1Q5TGY3 1603 aaPredicted RBP15.29■□□□□ 0.04
LINC00564-201ENST00000567258 ADGRL3Q9HAR2 1447 aa15.29■□□□□ 0.04
LINC00564-201ENST00000567258 MEX3CQ5U5Q3 659 aaKnown RBP15.29■□□□□ 0.04
LINC00564-201ENST00000567258 IFT172Q9UG01 1749 aa15.29■□□□□ 0.04
LINC00564-201ENST00000567258 ANKRD30BQ9BXX2 1392 aa15.28■□□□□ 0.04
LINC00564-201ENST00000567258 BRINP3Q76B58 766 aa15.28■□□□□ 0.04
LINC00564-201ENST00000567258 PLCD3Q8N3E9 789 aa15.28■□□□□ 0.04
LINC00564-201ENST00000567258 FAM163AQ96GL9 167 aaPredicted RBP15.28■□□□□ 0.04
LINC00564-201ENST00000567258 PTCH1Q13635 1447 aa15.27■□□□□ 0.04
LINC00564-201ENST00000567258 SHPRHQ149N8 1683 aa15.27■□□□□ 0.03
LINC00564-201ENST00000567258 SPATA31A6Q5VVP1 1343 aa15.26■□□□□ 0.03
LINC00564-201ENST00000567258 PCDH10Q9P2E7 1040 aa15.26■□□□□ 0.03
LINC00564-201ENST00000567258 ASXL1Q8IXJ9 1541 aa15.26■□□□□ 0.03
LINC00564-201ENST00000567258 MST1RQ04912 1400 aa15.26■□□□□ 0.03
LINC00564-201ENST00000567258 RAB3GAP2Q9H2M9 1393 aa15.25■□□□□ 0.03
LINC00564-201ENST00000567258 TTLL13PA6NNM8 815 aa15.25■□□□□ 0.03
LINC00564-201ENST00000567258 LCE2DQ5TA82 110 aaPredicted RBP15.25■□□□□ 0.03
LINC00564-201ENST00000567258 SPATA31E1Q6ZUB1 1445 aa15.24■□□□□ 0.03
LINC00564-201ENST00000567258 NHSL1Q5SYE7 1610 aa15.24■□□□□ 0.03
LINC00564-201ENST00000567258 ADGRF5Q8IZF2 1346 aa15.23■□□□□ 0.03
LINC00564-201ENST00000567258 LRRC59Q96AG4 307 aaKnown RBP15.23■□□□□ 0.03
LINC00564-201ENST00000567258 STK26Q9P289 416 aa15.23■□□□□ 0.03
LINC00564-201ENST00000567258 ROBO2Q9HCK4 1378 aa15.23■□□□□ 0.03
LINC00564-201ENST00000567258 RGS17Q9UGC6 210 aaPredicted RBP15.22■□□□□ 0.03
LINC00564-201ENST00000567258 NUTM2BA6NNL0 878 aaPredicted RBP15.21■□□□□ 0.03
LINC00564-201ENST00000567258 NUTM2EB1AL46 878 aaPredicted RBP15.21■□□□□ 0.03
LINC00564-201ENST00000567258 SEC24BO95487 1268 aa15.21■□□□□ 0.03
LINC00564-201ENST00000567258 NUTM2AQ8IVF1 878 aaPredicted RBP15.21■□□□□ 0.03
LINC00564-201ENST00000567258 COLQQ9Y215 455 aaPredicted RBP15.21■□□□□ 0.03
LINC00564-201ENST00000567258 PRAG1Q86YV5 1406 aa15.2■□□□□ 0.02
LINC00564-201ENST00000567258 LAMC1P11047 1609 aa15.2■□□□□ 0.02
LINC00564-201ENST00000567258 KNDC1Q76NI1 1749 aa15.2■□□□□ 0.02
LINC00564-201ENST00000567258 C1orf167Q5SNV9 1468 aa15.2■□□□□ 0.02
LINC00564-201ENST00000567258 ZNF772Q68DY9 489 aaPredicted RBP15.19■□□□□ 0.02
LINC00564-201ENST00000567258 POTEAQ6S8J7 498 aa15.18■□□□□ 0.02
LINC00564-201ENST00000567258 PCDHB13Q9Y5F0 798 aa15.18■□□□□ 0.02
LINC00564-201ENST00000567258 PIK3C2GO75747 1445 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms