RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 CARD14Q9BXL6 1004 aa14.55□□□□□ -0.08
CDH1-210ENST00000566612 KDM5BQ9UGL1 1544 aa14.55□□□□□ -0.08
CDH1-210ENST00000566612 C14orf93Q9H972 538 aaKnown RBP14.55□□□□□ -0.08
CDH1-210ENST00000566612 PDZRN3Q9UPQ7 1066 aa14.55□□□□□ -0.08
CDH1-210ENST00000566612 OS9Q13438 667 aaPredicted RBP14.54□□□□□ -0.08
CDH1-210ENST00000566612 FBLN1P23142 703 aa14.54□□□□□ -0.08
CDH1-210ENST00000566612 WDR63Q8IWG1 891 aa14.53□□□□□ -0.08
CDH1-210ENST00000566612 NECTIN2Q92692 538 aa14.53□□□□□ -0.08
CDH1-210ENST00000566612 STK31Q9BXU1 1019 aa14.53□□□□□ -0.08
CDH1-210ENST00000566612 NOB1Q9ULX3 412 aaKnown RBP14.53□□□□□ -0.08
CDH1-210ENST00000566612 ASXL2Q76L83 1435 aa14.53□□□□□ -0.08
CDH1-210ENST00000566612 A0A0G2JS52 829 aa14.53□□□□□ -0.08
CDH1-210ENST00000566612 USP35Q9P2H5 1018 aa14.53□□□□□ -0.08
CDH1-210ENST00000566612 NUTM2GQ5VZR2 741 aa14.52□□□□□ -0.08
CDH1-210ENST00000566612 THUMPD2Q9BTF0 503 aaKnown RBP14.52□□□□□ -0.08
CDH1-210ENST00000566612 NFKBIBQ15653 356 aa14.52□□□□□ -0.09
CDH1-210ENST00000566612 PLEKHH1Q9ULM0 1364 aa14.52□□□□□ -0.09
CDH1-210ENST00000566612 LRPPRCP42704 1394 aaKnown RBP14.51□□□□□ -0.09
CDH1-210ENST00000566612 TMPOP42166 694 aaKnown RBP14.51□□□□□ -0.09
CDH1-210ENST00000566612 RARSP54136 660 aaKnown RBP14.51□□□□□ -0.09
CDH1-210ENST00000566612 C1orf115Q9H7X2 142 aa14.51□□□□□ -0.09
CDH1-210ENST00000566612 SPINK5Q9NQ38 1064 aaPredicted RBP14.51□□□□□ -0.09
CDH1-210ENST00000566612 RRS1Q15050 365 aaKnown RBP14.51□□□□□ -0.09
CDH1-210ENST00000566612 KIF16BQ96L93 1317 aa14.5□□□□□ -0.09
CDH1-210ENST00000566612 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.5□□□□□ -0.09
CDH1-210ENST00000566612 TRIM44Q96DX7 344 aaPredicted RBP14.5□□□□□ -0.09
CDH1-210ENST00000566612 GNAI1P63096 354 aa14.5□□□□□ -0.09
CDH1-210ENST00000566612 ABCC2Q92887 1545 aa14.49□□□□□ -0.09
CDH1-210ENST00000566612 SLC26A8Q96RN1 970 aa14.49□□□□□ -0.09
CDH1-210ENST00000566612 GSE1Q14687 1217 aa14.49□□□□□ -0.09
CDH1-210ENST00000566612 ABCA8O94911 1581 aa14.48□□□□□ -0.09
CDH1-210ENST00000566612 COL17A1Q9UMD9 1497 aaPredicted RBP14.48□□□□□ -0.09
CDH1-210ENST00000566612 WDR7Q9Y4E6 1490 aa14.47□□□□□ -0.09
CDH1-210ENST00000566612 IGHDP01880 384 aa14.47□□□□□ -0.09
CDH1-210ENST00000566612 NKTRP30414 1462 aaKnown RBP14.47□□□□□ -0.09
CDH1-210ENST00000566612 MVPQ14764 893 aaKnown RBP14.47□□□□□ -0.09
CDH1-210ENST00000566612 ATF7IPQ6VMQ6 1270 aa14.47□□□□□ -0.09
CDH1-210ENST00000566612 LRRIQ1Q96JM4 1722 aa14.47□□□□□ -0.09
CDH1-210ENST00000566612 SSH1Q8WYL5 1049 aa14.46□□□□□ -0.09
CDH1-210ENST00000566612 TRIM6-TRIM34B2RNG4 842 aa14.46□□□□□ -0.09
CDH1-210ENST00000566612 C22orf23Q9BZE7 217 aa14.46□□□□□ -0.09
CDH1-210ENST00000566612 FRAT2O75474 233 aaPredicted RBP14.46□□□□□ -0.1
CDH1-210ENST00000566612 SULT6B1Q6IMI4 303 aa14.46□□□□□ -0.1
CDH1-210ENST00000566612 RTEL1-TNFRSF6BF6WH68 1400 aa14.45□□□□□ -0.1
CDH1-210ENST00000566612 API5Q9BZZ5 524 aaKnown RBP14.45□□□□□ -0.1
CDH1-210ENST00000566612 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.45□□□□□ -0.1
CDH1-210ENST00000566612 ATAD2Q6PL18 1390 aa14.45□□□□□ -0.1
CDH1-210ENST00000566612 ASXL1Q8IXJ9 1541 aa14.45□□□□□ -0.1
CDH1-210ENST00000566612 HMMRO75330 724 aa14.44□□□□□ -0.1
CDH1-210ENST00000566612 TWISTNBQ3B726 338 aaPredicted RBP14.44□□□□□ -0.1
CDH1-210ENST00000566612 NOL8Q76FK4 1167 aaKnown RBP14.44□□□□□ -0.1
CDH1-210ENST00000566612 TNNQ9UQP3 1299 aa14.44□□□□□ -0.1
CDH1-210ENST00000566612 DMRT2Q9Y5R5 561 aa14.44□□□□□ -0.1
CDH1-210ENST00000566612 EMILIN1Q9Y6C2 1016 aa14.44□□□□□ -0.1
CDH1-210ENST00000566612 GPRASP1Q5JY77 1395 aa14.44□□□□□ -0.1
CDH1-210ENST00000566612 NME9Q86XW9 330 aa14.44□□□□□ -0.1
CDH1-210ENST00000566612 DCTN1Q14203 1278 aa14.43□□□□□ -0.1
CDH1-210ENST00000566612 TMEM57Q8N5G2 664 aa14.43□□□□□ -0.1
CDH1-210ENST00000566612 ADGBQ8N7X0 1667 aa14.43□□□□□ -0.1
CDH1-210ENST00000566612 AAMPQ13685 434 aa14.43□□□□□ -0.1
CDH1-210ENST00000566612 RNF123Q5XPI4 1314 aa14.43□□□□□ -0.1
CDH1-210ENST00000566612 KCNJ4P48050 445 aa14.43□□□□□ -0.1
CDH1-210ENST00000566612 NLRP6P59044 892 aa14.43□□□□□ -0.1
CDH1-210ENST00000566612 EIF2S2P20042 333 aaKnown RBP14.43□□□□□ -0.1
CDH1-210ENST00000566612 NUDT16Q96DE0 195 aaKnown RBP14.43□□□□□ -0.1
CDH1-210ENST00000566612 SAMD9LQ8IVG5 1584 aa14.42□□□□□ -0.1
CDH1-210ENST00000566612 TSPYL4Q9UJ04 414 aa14.42□□□□□ -0.1
CDH1-210ENST00000566612 FCHSD2O94868 740 aa14.42□□□□□ -0.1
CDH1-210ENST00000566612 CCDC61Q9Y6R9 512 aa14.41□□□□□ -0.1
CDH1-210ENST00000566612 FYB1O15117 783 aa14.41□□□□□ -0.1
CDH1-210ENST00000566612 GBP4Q96PP9 640 aa14.41□□□□□ -0.1
CDH1-210ENST00000566612 PLA2R1Q13018 1463 aa14.41□□□□□ -0.1
CDH1-210ENST00000566612 KDM5CP41229 1560 aa14.41□□□□□ -0.1
CDH1-210ENST00000566612 L1TD1Q5T7N2 865 aaKnown RBP14.4□□□□□ -0.1
CDH1-210ENST00000566612 FOXD4L5Q5VV16 416 aaPredicted RBP14.4□□□□□ -0.1
CDH1-210ENST00000566612 FOXD4L4Q8WXT5 416 aaPredicted RBP14.4□□□□□ -0.1
CDH1-210ENST00000566612 FKBP5Q13451 457 aaPredicted RBP14.4□□□□□ -0.1
CDH1-210ENST00000566612 RILPL2Q969X0 211 aa14.4□□□□□ -0.1
CDH1-210ENST00000566612 CSB-PGBD3P0DP91 1061 aa14.39□□□□□ -0.11
CDH1-210ENST00000566612 MCCP23508 829 aa14.39□□□□□ -0.11
CDH1-210ENST00000566612 PCDHB15Q9Y5E8 787 aa14.39□□□□□ -0.11
CDH1-210ENST00000566612 CFAP65Q6ZU64 1925 aaKnown RBP14.39□□□□□ -0.11
CDH1-210ENST00000566612 ARHGEF5Q12774 1597 aa14.39□□□□□ -0.11
CDH1-210ENST00000566612 ZNF518AQ6AHZ1 1483 aa14.38□□□□□ -0.11
CDH1-210ENST00000566612 TRIM27P14373 513 aa14.38□□□□□ -0.11
CDH1-210ENST00000566612 NFE2L2Q16236 605 aa14.38□□□□□ -0.11
CDH1-210ENST00000566612 GOLGA6L3A6NEY3 463 aa14.37□□□□□ -0.11
CDH1-210ENST00000566612 RLBP1P12271 317 aa14.37□□□□□ -0.11
CDH1-210ENST00000566612 CFAP44Q96MT7 982 aa14.37□□□□□ -0.11
CDH1-210ENST00000566612 MIS18AQ9NYP9 233 aa14.37□□□□□ -0.11
CDH1-210ENST00000566612 TTC37Q6PGP7 1564 aa14.37□□□□□ -0.11
CDH1-210ENST00000566612 EIF2AK4Q9P2K8 1649 aaKnown RBP14.37□□□□□ -0.11
CDH1-210ENST00000566612 MAST1Q9Y2H9 1570 aa14.37□□□□□ -0.11
CDH1-210ENST00000566612 CT47B1P0C2W7 299 aaPredicted RBP14.37□□□□□ -0.11
CDH1-210ENST00000566612 CEBPAP49715 358 aaPredicted RBP14.37□□□□□ -0.11
CDH1-210ENST00000566612 ERCC6L2Q5T890 1561 aa14.36□□□□□ -0.11
CDH1-210ENST00000566612 MAGI2Q86UL8 1455 aa14.36□□□□□ -0.11
CDH1-210ENST00000566612 TAOK2Q9UL54 1235 aa14.36□□□□□ -0.11
CDH1-210ENST00000566612 ZNF692Q9BU19 519 aaPredicted RBP14.36□□□□□ -0.11
CDH1-210ENST00000566612 NINLQ9Y2I6 1382 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms