RNA–Protein interactions for RNA: ENST00000566581.5

LPCAT4-206, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 1 (best)

Gene LPCAT4, Length 915 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-206ENST00000566581 PHF23Q9BUL5 403 aaPredicted RBP18.44■□□□□ 0.54
LPCAT4-206ENST00000566581 KDM2AQ9Y2K7 1162 aa18.43■□□□□ 0.54
LPCAT4-206ENST00000566581 ADGRB1O14514 1584 aa18.41■□□□□ 0.54
LPCAT4-206ENST00000566581 SPATA31A6Q5VVP1 1343 aa18.41■□□□□ 0.54
LPCAT4-206ENST00000566581 DLC1Q96QB1 1528 aa18.4■□□□□ 0.54
LPCAT4-206ENST00000566581 LRRC59Q96AG4 307 aaKnown RBP18.4■□□□□ 0.54
LPCAT4-206ENST00000566581 PLEKHH1Q9ULM0 1364 aa18.4■□□□□ 0.54
LPCAT4-206ENST00000566581 ORAI2Q96SN7 254 aa18.39■□□□□ 0.53
LPCAT4-206ENST00000566581 FMN2Q9NZ56 1722 aa18.38■□□□□ 0.53
LPCAT4-206ENST00000566581 RGS17Q9UGC6 210 aaPredicted RBP18.38■□□□□ 0.53
LPCAT4-206ENST00000566581 SOCS7O14512 581 aa18.37■□□□□ 0.53
LPCAT4-206ENST00000566581 KIAA1210Q9ULL0 1709 aa18.37■□□□□ 0.53
LPCAT4-206ENST00000566581 RGPD8O14715 1765 aaPredicted RBP18.36■□□□□ 0.53
LPCAT4-206ENST00000566581 SOS2Q07890 1332 aaPredicted RBP18.36■□□□□ 0.53
LPCAT4-206ENST00000566581 DDX17Q92841 729 aaKnown RBP18.36■□□□□ 0.53
LPCAT4-206ENST00000566581 PRAM1Q96QH2 718 aa18.35■□□□□ 0.53
LPCAT4-206ENST00000566581 ESCO1Q5FWF5 840 aa18.34■□□□□ 0.53
LPCAT4-206ENST00000566581 TRIM26Q12899 539 aaPredicted RBP18.33■□□□□ 0.52
LPCAT4-206ENST00000566581 POGKQ9P215 609 aa18.33■□□□□ 0.52
LPCAT4-206ENST00000566581 NPHP3Q7Z494 1330 aa18.32■□□□□ 0.52
LPCAT4-206ENST00000566581 LRP6O75581 1613 aa18.32■□□□□ 0.52
LPCAT4-206ENST00000566581 TRAK1Q9UPV9 953 aa18.32■□□□□ 0.52
LPCAT4-206ENST00000566581 PNPLA6Q8IY17 1366 aa18.3■□□□□ 0.52
LPCAT4-206ENST00000566581 ADGRB2O60241 1585 aa18.3■□□□□ 0.52
LPCAT4-206ENST00000566581 ARHGEF28Q8N1W1 1705 aaKnown RBP18.3■□□□□ 0.52
LPCAT4-206ENST00000566581 KIF1AQ12756 1690 aa18.3■□□□□ 0.52
LPCAT4-206ENST00000566581 NUTM2FA1L443 756 aa18.29■□□□□ 0.52
LPCAT4-206ENST00000566581 FOXO3O43524 673 aa18.29■□□□□ 0.52
LPCAT4-206ENST00000566581 SAFB2Q14151 953 aaKnown RBP eCLIP18.29■□□□□ 0.52
LPCAT4-206ENST00000566581 PXDNQ92626 1479 aa18.28■□□□□ 0.52
LPCAT4-206ENST00000566581 MEX3CQ5U5Q3 659 aaKnown RBP18.27■□□□□ 0.52
LPCAT4-206ENST00000566581 POTEAQ6S8J7 498 aa18.27■□□□□ 0.52
LPCAT4-206ENST00000566581 L3MBTL2Q969R5 705 aa18.27■□□□□ 0.52
LPCAT4-206ENST00000566581 SIN3AQ96ST3 1273 aa18.27■□□□□ 0.52
LPCAT4-206ENST00000566581 NUTM2BA6NNL0 878 aaPredicted RBP18.26■□□□□ 0.51
LPCAT4-206ENST00000566581 NUTM2EB1AL46 878 aaPredicted RBP18.26■□□□□ 0.51
LPCAT4-206ENST00000566581 NUTM2AQ8IVF1 878 aaPredicted RBP18.26■□□□□ 0.51
LPCAT4-206ENST00000566581 COL22A1Q8NFW1 1626 aaPredicted RBP18.26■□□□□ 0.51
LPCAT4-206ENST00000566581 ANKARQ7Z5J8 1434 aa18.25■□□□□ 0.51
LPCAT4-206ENST00000566581 USP32Q8NFA0 1604 aa18.24■□□□□ 0.51
LPCAT4-206ENST00000566581 ZNF772Q68DY9 489 aaPredicted RBP18.24■□□□□ 0.51
LPCAT4-206ENST00000566581 PHF8Q9UPP1 1060 aa18.24■□□□□ 0.51
LPCAT4-206ENST00000566581 EIF3AQ14152 1382 aaKnown RBP18.23■□□□□ 0.51
LPCAT4-206ENST00000566581 NBPF1Q3BBV0 1214 aa18.23■□□□□ 0.51
LPCAT4-206ENST00000566581 MINK1Q8N4C8 1332 aaPredicted RBP18.23■□□□□ 0.51
LPCAT4-206ENST00000566581 WASLO00401 505 aaPredicted RBP18.22■□□□□ 0.51
LPCAT4-206ENST00000566581 NEUROD1Q13562 356 aa18.22■□□□□ 0.51
LPCAT4-206ENST00000566581 HIRIP3Q9BW71 556 aaPredicted RBP18.22■□□□□ 0.51
LPCAT4-206ENST00000566581 TULP4Q9NRJ4 1543 aa18.2■□□□□ 0.5
LPCAT4-206ENST00000566581 XPCQ01831 940 aaPredicted RBP18.2■□□□□ 0.5
LPCAT4-206ENST00000566581 KRT28Q7Z3Y7 464 aa18.2■□□□□ 0.5
LPCAT4-206ENST00000566581 MARF1Q9Y4F3 1742 aaKnown RBP18.2■□□□□ 0.5
LPCAT4-206ENST00000566581 SPATA31A3Q5VYP0 1347 aa18.2■□□□□ 0.5
LPCAT4-206ENST00000566581 PSME1Q06323 249 aa18.19■□□□□ 0.5
LPCAT4-206ENST00000566581 TRPM1Q7Z4N2 1603 aa18.19■□□□□ 0.5
LPCAT4-206ENST00000566581 ITSN1Q15811 1721 aa18.18■□□□□ 0.5
LPCAT4-206ENST00000566581 AFF2P51816 1311 aa18.18■□□□□ 0.5
LPCAT4-206ENST00000566581 PRR36Q9H6K5 1346 aa18.17■□□□□ 0.5
LPCAT4-206ENST00000566581 C8orf37Q96NL8 207 aa18.16■□□□□ 0.5
LPCAT4-206ENST00000566581 SBNO1A3KN83 1393 aa18.16■□□□□ 0.5
LPCAT4-206ENST00000566581 ADAMTS2O95450 1211 aa18.15■□□□□ 0.5
LPCAT4-206ENST00000566581 PMFBP1Q8TBY8 1022 aa18.15■□□□□ 0.5
LPCAT4-206ENST00000566581 NGLY1Q96IV0 654 aa18.14■□□□□ 0.49
LPCAT4-206ENST00000566581 CDK19Q9BWU1 502 aa18.14■□□□□ 0.49
LPCAT4-206ENST00000566581 TNS3Q68CZ2 1445 aa18.14■□□□□ 0.49
LPCAT4-206ENST00000566581 TRPM3Q9HCF6 1732 aaPredicted RBP18.13■□□□□ 0.49
LPCAT4-206ENST00000566581 FNBP4Q8N3X1 1017 aaPredicted RBP18.13■□□□□ 0.49
LPCAT4-206ENST00000566581 NUDT16Q96DE0 195 aaKnown RBP18.13■□□□□ 0.49
LPCAT4-206ENST00000566581 CENPJQ9HC77 1338 aaPredicted RBP18.13■□□□□ 0.49
LPCAT4-206ENST00000566581 ATP7BP35670 1465 aa18.13■□□□□ 0.49
LPCAT4-206ENST00000566581 QRICH2Q9H0J4 1663 aa18.12■□□□□ 0.49
LPCAT4-206ENST00000566581 RXRBP28702 533 aa18.11■□□□□ 0.49
LPCAT4-206ENST00000566581 QTRT2Q9H974 415 aaKnown RBP18.11■□□□□ 0.49
LPCAT4-206ENST00000566581 ARHGEF10O15013 1369 aa18.11■□□□□ 0.49
LPCAT4-206ENST00000566581 GPRASP1Q5JY77 1395 aa18.11■□□□□ 0.49
LPCAT4-206ENST00000566581 TOPAZ1Q8N9V7 1692 aa18.1■□□□□ 0.49
LPCAT4-206ENST00000566581 ALS2Q96Q42 1657 aa18.1■□□□□ 0.49
LPCAT4-206ENST00000566581 CCDC61Q9Y6R9 512 aa18.1■□□□□ 0.49
LPCAT4-206ENST00000566581 CDK12Q9NYV4 1490 aaPredicted RBP18.09■□□□□ 0.49
LPCAT4-206ENST00000566581 ROCK2O75116 1388 aaKnown RBP18.09■□□□□ 0.49
LPCAT4-206ENST00000566581 NBPF8Q3BBV2 869 aa18.09■□□□□ 0.49
LPCAT4-206ENST00000566581 NGDNQ8NEJ9 315 aaKnown RBP18.09■□□□□ 0.49
LPCAT4-206ENST00000566581 TONSLQ96HA7 1378 aa18.08■□□□□ 0.49
LPCAT4-206ENST00000566581 ABCA3Q99758 1704 aa18.07■□□□□ 0.48
LPCAT4-206ENST00000566581 PLEKHG3A1L390 1219 aa18.07■□□□□ 0.48
LPCAT4-206ENST00000566581 RBM6P78332 1123 aaKnown RBP18.07■□□□□ 0.48
LPCAT4-206ENST00000566581 USP21Q9UK80 565 aa18.07■□□□□ 0.48
LPCAT4-206ENST00000566581 POLR3AO14802 1390 aaPredicted RBP18.06■□□□□ 0.48
LPCAT4-206ENST00000566581 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.06■□□□□ 0.48
LPCAT4-206ENST00000566581 LMOD2Q6P5Q4 547 aa18.05■□□□□ 0.48
LPCAT4-206ENST00000566581 TRPC5Q9UL62 973 aaPredicted RBP18.05■□□□□ 0.48
LPCAT4-206ENST00000566581 BCL9LQ86UU0 1499 aa18.04■□□□□ 0.48
LPCAT4-206ENST00000566581 SRPK2P78362 688 aaKnown RBP18.04■□□□□ 0.48
LPCAT4-206ENST00000566581 CABLES1Q8TDN4 633 aa18.03■□□□□ 0.48
LPCAT4-206ENST00000566581 ATRNO75882 1429 aa18.03■□□□□ 0.48
LPCAT4-206ENST00000566581 SLIT2O94813 1529 aa18.03■□□□□ 0.48
LPCAT4-206ENST00000566581 ACEP12821 1306 aa18.02■□□□□ 0.48
LPCAT4-206ENST00000566581 HAP1P54257 671 aaPredicted RBP18.02■□□□□ 0.48
LPCAT4-206ENST00000566581 NWD2Q9ULI1 1742 aa18.02■□□□□ 0.48
LPCAT4-206ENST00000566581 CRYBG1Q9Y4K1 1723 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms