RNA–Protein interactions for RNA: ENST00000565666.5

CMTM3-210, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-210ENST00000565666 AHDC1Q5TGY3 1603 aaPredicted RBP26.98■■□□□ 1.91
CMTM3-210ENST00000565666 PRAM1Q96QH2 718 aa26.98■■□□□ 1.91
CMTM3-210ENST00000565666 POGKQ9P215 609 aa26.98■■□□□ 1.91
CMTM3-210ENST00000565666 TRAK1Q9UPV9 953 aa26.98■■□□□ 1.91
CMTM3-210ENST00000565666 C1orf167Q5SNV9 1468 aa26.98■■□□□ 1.91
CMTM3-210ENST00000565666 DISP3Q9P2K9 1392 aa26.97■■□□□ 1.91
CMTM3-210ENST00000565666 SAFB2Q14151 953 aaKnown RBP eCLIP26.96■■□□□ 1.91
CMTM3-210ENST00000565666 PCGF6Q9BYE7 350 aa26.96■■□□□ 1.91
CMTM3-210ENST00000565666 COL16A1Q07092 1604 aaPredicted RBP26.96■■□□□ 1.91
CMTM3-210ENST00000565666 MED1Q15648 1581 aaPredicted RBP26.96■■□□□ 1.91
CMTM3-210ENST00000565666 NHSL1Q5SYE7 1610 aa26.94■■□□□ 1.9
CMTM3-210ENST00000565666 FMN2Q9NZ56 1722 aa26.92■■□□□ 1.9
CMTM3-210ENST00000565666 ARHGEF28Q8N1W1 1705 aaKnown RBP26.9■■□□□ 1.9
CMTM3-210ENST00000565666 NUTM2FA1L443 756 aa26.9■■□□□ 1.9
CMTM3-210ENST00000565666 ORAI2Q96SN7 254 aa26.9■■□□□ 1.9
CMTM3-210ENST00000565666 TONSLQ96HA7 1378 aa26.88■■□□□ 1.89
CMTM3-210ENST00000565666 JCADQ9P266 1359 aa26.88■■□□□ 1.89
CMTM3-210ENST00000565666 NBPF1Q3BBV0 1214 aa26.87■■□□□ 1.89
CMTM3-210ENST00000565666 ESCO1Q5FWF5 840 aa26.87■■□□□ 1.89
CMTM3-210ENST00000565666 DDX17Q92841 729 aaKnown RBP26.86■■□□□ 1.89
CMTM3-210ENST00000565666 ADGRB2O60241 1585 aa26.85■■□□□ 1.89
CMTM3-210ENST00000565666 TRPM1Q7Z4N2 1603 aa26.85■■□□□ 1.89
CMTM3-210ENST00000565666 MINK1Q8N4C8 1332 aaPredicted RBP26.84■■□□□ 1.89
CMTM3-210ENST00000565666 HIRIP3Q9BW71 556 aaPredicted RBP26.83■■□□□ 1.89
CMTM3-210ENST00000565666 SHPRHQ149N8 1683 aa26.82■■□□□ 1.88
CMTM3-210ENST00000565666 PHF23Q9BUL5 403 aaPredicted RBP26.81■■□□□ 1.88
CMTM3-210ENST00000565666 RGPD8O14715 1765 aaPredicted RBP26.81■■□□□ 1.88
CMTM3-210ENST00000565666 KIF1AQ12756 1690 aa26.79■■□□□ 1.88
CMTM3-210ENST00000565666 LRRC59Q96AG4 307 aaKnown RBP26.79■■□□□ 1.88
CMTM3-210ENST00000565666 ROCK2O75116 1388 aaKnown RBP26.77■■□□□ 1.88
CMTM3-210ENST00000565666 NPHP3Q7Z494 1330 aa26.77■■□□□ 1.88
CMTM3-210ENST00000565666 EIF3AQ14152 1382 aaKnown RBP26.76■■□□□ 1.87
CMTM3-210ENST00000565666 SPATA31A6Q5VVP1 1343 aa26.76■■□□□ 1.87
CMTM3-210ENST00000565666 FOXO3O43524 673 aa26.75■■□□□ 1.87
CMTM3-210ENST00000565666 ANKARQ7Z5J8 1434 aa26.74■■□□□ 1.87
CMTM3-210ENST00000565666 SOS2Q07890 1332 aaPredicted RBP26.74■■□□□ 1.87
CMTM3-210ENST00000565666 WASLO00401 505 aaPredicted RBP26.74■■□□□ 1.87
CMTM3-210ENST00000565666 NBPF8Q3BBV2 869 aa26.74■■□□□ 1.87
CMTM3-210ENST00000565666 USP32Q8NFA0 1604 aa26.74■■□□□ 1.87
CMTM3-210ENST00000565666 TULP4Q9NRJ4 1543 aa26.73■■□□□ 1.87
CMTM3-210ENST00000565666 PHF8Q9UPP1 1060 aa26.72■■□□□ 1.87
CMTM3-210ENST00000565666 CENPJQ9HC77 1338 aaPredicted RBP26.71■■□□□ 1.87
CMTM3-210ENST00000565666 QRICH2Q9H0J4 1663 aa26.71■■□□□ 1.87
CMTM3-210ENST00000565666 XPCQ01831 940 aaPredicted RBP26.71■■□□□ 1.87
CMTM3-210ENST00000565666 PXDNQ92626 1479 aa26.7■■□□□ 1.87
CMTM3-210ENST00000565666 PNPLA6Q8IY17 1366 aa26.7■■□□□ 1.86
CMTM3-210ENST00000565666 NUTM2BA6NNL0 878 aaPredicted RBP26.69■■□□□ 1.86
CMTM3-210ENST00000565666 NUTM2EB1AL46 878 aaPredicted RBP26.69■■□□□ 1.86
CMTM3-210ENST00000565666 NUTM2AQ8IVF1 878 aaPredicted RBP26.69■■□□□ 1.86
CMTM3-210ENST00000565666 LRP6O75581 1613 aa26.68■■□□□ 1.86
CMTM3-210ENST00000565666 MEX3CQ5U5Q3 659 aaKnown RBP26.68■■□□□ 1.86
CMTM3-210ENST00000565666 CLSPNQ9HAW4 1339 aa26.67■■□□□ 1.86
CMTM3-210ENST00000565666 ITSN1Q15811 1721 aa26.66■■□□□ 1.86
CMTM3-210ENST00000565666 PMFBP1Q8TBY8 1022 aa26.66■■□□□ 1.86
CMTM3-210ENST00000565666 PRR36Q9H6K5 1346 aa26.65■■□□□ 1.86
CMTM3-210ENST00000565666 CDK19Q9BWU1 502 aa26.65■■□□□ 1.86
CMTM3-210ENST00000565666 RALGAPBQ86X10 1494 aa26.65■■□□□ 1.86
CMTM3-210ENST00000565666 GPRASP1Q5JY77 1395 aa26.64■■□□□ 1.86
CMTM3-210ENST00000565666 ILDR2Q71H61 639 aa26.64■■□□□ 1.86
CMTM3-210ENST00000565666 KRT28Q7Z3Y7 464 aa26.64■■□□□ 1.86
CMTM3-210ENST00000565666 CCER1Q8TC90 406 aaPredicted RBP26.63■■□□□ 1.85
CMTM3-210ENST00000565666 CARD11Q9BXL7 1154 aa26.63■■□□□ 1.85
CMTM3-210ENST00000565666 ATP7BP35670 1465 aa26.62■■□□□ 1.85
CMTM3-210ENST00000565666 PSME1Q06323 249 aa26.62■■□□□ 1.85
CMTM3-210ENST00000565666 NUDT16Q96DE0 195 aaKnown RBP26.61■■□□□ 1.85
CMTM3-210ENST00000565666 COL22A1Q8NFW1 1626 aaPredicted RBP26.61■■□□□ 1.85
CMTM3-210ENST00000565666 SRPK2P78362 688 aaKnown RBP26.59■■□□□ 1.85
CMTM3-210ENST00000565666 TOPAZ1Q8N9V7 1692 aa26.57■■□□□ 1.84
CMTM3-210ENST00000565666 NGDNQ8NEJ9 315 aaKnown RBP26.57■■□□□ 1.84
CMTM3-210ENST00000565666 RGS17Q9UGC6 210 aaPredicted RBP26.57■■□□□ 1.84
CMTM3-210ENST00000565666 SPATA31A3Q5VYP0 1347 aa26.57■■□□□ 1.84
CMTM3-210ENST00000565666 TNS3Q68CZ2 1445 aa26.56■■□□□ 1.84
CMTM3-210ENST00000565666 TIMELESSQ9UNS1 1208 aa26.54■■□□□ 1.84
CMTM3-210ENST00000565666 SBNO1A3KN83 1393 aa26.54■■□□□ 1.84
CMTM3-210ENST00000565666 ADAMTS2O95450 1211 aa26.53■■□□□ 1.84
CMTM3-210ENST00000565666 LMOD2Q6P5Q4 547 aa26.53■■□□□ 1.84
CMTM3-210ENST00000565666 CABP2Q9NPB3 220 aa26.53■■□□□ 1.84
CMTM3-210ENST00000565666 CCDC61Q9Y6R9 512 aa26.53■■□□□ 1.84
CMTM3-210ENST00000565666 EVC2Q86UK5 1308 aa26.53■■□□□ 1.84
CMTM3-210ENST00000565666 TRPM3Q9HCF6 1732 aaPredicted RBP26.51■■□□□ 1.83
CMTM3-210ENST00000565666 C8orf37Q96NL8 207 aa26.51■■□□□ 1.83
CMTM3-210ENST00000565666 ARHGEF10O15013 1369 aa26.49■■□□□ 1.83
CMTM3-210ENST00000565666 PPIP5K1Q6PFW1 1433 aa26.48■■□□□ 1.83
CMTM3-210ENST00000565666 ZNF772Q68DY9 489 aaPredicted RBP26.48■■□□□ 1.83
CMTM3-210ENST00000565666 ACEP12821 1306 aa26.47■■□□□ 1.83
CMTM3-210ENST00000565666 AFF2P51816 1311 aa26.47■■□□□ 1.83
CMTM3-210ENST00000565666 PLEKHG5O94827 1062 aa26.47■■□□□ 1.83
CMTM3-210ENST00000565666 POTEAQ6S8J7 498 aa26.47■■□□□ 1.83
CMTM3-210ENST00000565666 MARF1Q9Y4F3 1742 aaKnown RBP26.47■■□□□ 1.83
CMTM3-210ENST00000565666 PLEKHG3A1L390 1219 aa26.46■■□□□ 1.83
CMTM3-210ENST00000565666 PAK3O75914 559 aaPredicted RBP26.46■■□□□ 1.83
CMTM3-210ENST00000565666 HAP1P54257 671 aaPredicted RBP26.46■■□□□ 1.83
CMTM3-210ENST00000565666 NGLY1Q96IV0 654 aa26.46■■□□□ 1.83
CMTM3-210ENST00000565666 SBNO2Q9Y2G9 1366 aa26.46■■□□□ 1.83
CMTM3-210ENST00000565666 ALS2Q96Q42 1657 aa26.45■■□□□ 1.82
CMTM3-210ENST00000565666 POLR3AO14802 1390 aaPredicted RBP26.45■■□□□ 1.82
CMTM3-210ENST00000565666 ABCA3Q99758 1704 aa26.42■■□□□ 1.82
CMTM3-210ENST00000565666 CABLES1Q8TDN4 633 aa26.41■■□□□ 1.82
CMTM3-210ENST00000565666 CABP1Q9NZU7 370 aa26.41■■□□□ 1.82
CMTM3-210ENST00000565666 ATAD2Q6PL18 1390 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms