RNA–Protein interactions for RNA: ENST00000565248.1

THUMPD1-203, Transcript of THUMP domain containing 1, humanhuman

TSL 3

Gene THUMPD1, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-203ENST00000565248 MYOM2P54296 1465 aa23.15■■□□□ 1.3
THUMPD1-203ENST00000565248 MST1RQ04912 1400 aa23.14■■□□□ 1.29
THUMPD1-203ENST00000565248 RALGAPBQ86X10 1494 aa23.13■■□□□ 1.29
THUMPD1-203ENST00000565248 ZNF316A6NFI3 1004 aaPredicted RBP23.12■■□□□ 1.29
THUMPD1-203ENST00000565248 XRN1Q8IZH2 1706 aaKnown RBP23.12■■□□□ 1.29
THUMPD1-203ENST00000565248 NGLY1Q96IV0 654 aa23.11■■□□□ 1.29
THUMPD1-203ENST00000565248 SETBP1Q9Y6X0 1596 aa23.1■■□□□ 1.29
THUMPD1-203ENST00000565248 ADRA2BP18089 450 aa23.1■■□□□ 1.29
THUMPD1-203ENST00000565248 RGS12O14924 1447 aa23.09■■□□□ 1.29
THUMPD1-203ENST00000565248 VGFO15240 615 aaPredicted RBP23.09■■□□□ 1.29
THUMPD1-203ENST00000565248 IFT172Q9UG01 1749 aa23.08■■□□□ 1.29
THUMPD1-203ENST00000565248 PNPLA6Q8IY17 1366 aa23.08■■□□□ 1.29
THUMPD1-203ENST00000565248 NRXN3Q9Y4C0 1643 aa23.07■■□□□ 1.28
THUMPD1-203ENST00000565248 ADGRL3Q9HAR2 1447 aa23.07■■□□□ 1.28
THUMPD1-203ENST00000565248 PPLO60437 1756 aa23.06■■□□□ 1.28
THUMPD1-203ENST00000565248 ROCK2O75116 1388 aaKnown RBP23.06■■□□□ 1.28
THUMPD1-203ENST00000565248 EIF4G2P78344 907 aaKnown RBP eCLIP23.06■■□□□ 1.28
THUMPD1-203ENST00000565248 NEXMIFQ5QGS0 1516 aa23.05■■□□□ 1.28
THUMPD1-203ENST00000565248 TRPM1Q7Z4N2 1603 aa23.04■■□□□ 1.28
THUMPD1-203ENST00000565248 METP08581 1390 aa23.04■■□□□ 1.28
THUMPD1-203ENST00000565248 ADAMTS2O95450 1211 aa23.04■■□□□ 1.28
THUMPD1-203ENST00000565248 DDX17Q92841 729 aaKnown RBP23.04■■□□□ 1.28
THUMPD1-203ENST00000565248 CARD11Q9BXL7 1154 aa23.04■■□□□ 1.28
THUMPD1-203ENST00000565248 NRXN1Q9ULB1 1477 aa23.04■■□□□ 1.28
THUMPD1-203ENST00000565248 ATAD2Q6PL18 1390 aa23.03■■□□□ 1.28
THUMPD1-203ENST00000565248 ADGRF5Q8IZF2 1346 aa23.02■■□□□ 1.28
THUMPD1-203ENST00000565248 SRCAPQ6ZRS2 3230 aa23.01■■□□□ 1.27
THUMPD1-203ENST00000565248 GPRASP1Q5JY77 1395 aa23.01■■□□□ 1.27
THUMPD1-203ENST00000565248 NALCNQ8IZF0 1738 aa23■■□□□ 1.27
THUMPD1-203ENST00000565248 KIAA1210Q9ULL0 1709 aa23■■□□□ 1.27
THUMPD1-203ENST00000565248 USP21Q9UK80 565 aa22.99■■□□□ 1.27
THUMPD1-203ENST00000565248 TRPC5Q9UL62 973 aaPredicted RBP22.99■■□□□ 1.27
THUMPD1-203ENST00000565248 LAMC1P11047 1609 aa22.98■■□□□ 1.27
THUMPD1-203ENST00000565248 PIK3C2GO75747 1445 aa22.98■■□□□ 1.27
THUMPD1-203ENST00000565248 C1orf167Q5SNV9 1468 aa22.98■■□□□ 1.27
THUMPD1-203ENST00000565248 HSPA5P11021 654 aaKnown RBP22.97■■□□□ 1.27
THUMPD1-203ENST00000565248 USP47Q96K76 1375 aa22.97■■□□□ 1.27
THUMPD1-203ENST00000565248 ZRANB1Q9UGI0 708 aa22.96■■□□□ 1.27
THUMPD1-203ENST00000565248 PTCH1Q13635 1447 aa22.94■■□□□ 1.26
THUMPD1-203ENST00000565248 NBPF1Q3BBV0 1214 aa22.94■■□□□ 1.26
THUMPD1-203ENST00000565248 SOS2Q07890 1332 aaPredicted RBP22.93■■□□□ 1.26
THUMPD1-203ENST00000565248 C14orf93Q9H972 538 aaKnown RBP22.93■■□□□ 1.26
THUMPD1-203ENST00000565248 CFAP70Q5T0N1 1121 aa22.92■■□□□ 1.26
THUMPD1-203ENST00000565248 FNBP4Q8N3X1 1017 aaPredicted RBP22.92■■□□□ 1.26
THUMPD1-203ENST00000565248 CCDC125Q86Z20 511 aa22.91■■□□□ 1.26
THUMPD1-203ENST00000565248 ORAI2Q96SN7 254 aa22.91■■□□□ 1.26
THUMPD1-203ENST00000565248 EIF3AQ14152 1382 aaKnown RBP22.89■■□□□ 1.26
THUMPD1-203ENST00000565248 HIRIP3Q9BW71 556 aaPredicted RBP22.87■■□□□ 1.25
THUMPD1-203ENST00000565248 ATRNO75882 1429 aa22.87■■□□□ 1.25
THUMPD1-203ENST00000565248 COL22A1Q8NFW1 1626 aaPredicted RBP22.86■■□□□ 1.25
THUMPD1-203ENST00000565248 ROBO2Q9HCK4 1378 aa22.85■■□□□ 1.25
THUMPD1-203ENST00000565248 NPHP3Q7Z494 1330 aa22.84■■□□□ 1.25
THUMPD1-203ENST00000565248 EP400Q96L91 3159 aa22.84■■□□□ 1.25
THUMPD1-203ENST00000565248 ST20-MTHFSA0A0A6YYL1 179 aa22.82■■□□□ 1.24
THUMPD1-203ENST00000565248 ESCO1Q5FWF5 840 aa22.82■■□□□ 1.24
THUMPD1-203ENST00000565248 ADGRB1O14514 1584 aa22.8■■□□□ 1.24
THUMPD1-203ENST00000565248 MARF1Q9Y4F3 1742 aaKnown RBP22.8■■□□□ 1.24
THUMPD1-203ENST00000565248 SLC24A1O60721 1099 aa22.8■■□□□ 1.24
THUMPD1-203ENST00000565248 LRPPRCP42704 1394 aaKnown RBP22.79■■□□□ 1.24
THUMPD1-203ENST00000565248 GJD4Q96KN9 370 aaPredicted RBP22.78■■□□□ 1.24
THUMPD1-203ENST00000565248 BCL9LQ86UU0 1499 aa22.78■■□□□ 1.24
THUMPD1-203ENST00000565248 TMEM132EQ6IEE7 984 aa22.77■■□□□ 1.24
THUMPD1-203ENST00000565248 FOXO3O43524 673 aa22.75■■□□□ 1.23
THUMPD1-203ENST00000565248 DIEXFQ68CQ4 756 aaKnown RBP22.75■■□□□ 1.23
THUMPD1-203ENST00000565248 CDC42BPGQ6DT37 1551 aa22.74■■□□□ 1.23
THUMPD1-203ENST00000565248 PXDNQ92626 1479 aa22.73■■□□□ 1.23
THUMPD1-203ENST00000565248 TRAK1Q9UPV9 953 aa22.73■■□□□ 1.23
THUMPD1-203ENST00000565248 CCDC7Q96M83 1385 aa22.73■■□□□ 1.23
THUMPD1-203ENST00000565248 YTHDC2Q9H6S0 1430 aaKnown RBP22.73■■□□□ 1.23
THUMPD1-203ENST00000565248 TMF1P82094 1093 aa22.72■■□□□ 1.23
THUMPD1-203ENST00000565248 XPCQ01831 940 aaPredicted RBP22.72■■□□□ 1.23
THUMPD1-203ENST00000565248 CENPJQ9HC77 1338 aaPredicted RBP22.72■■□□□ 1.23
THUMPD1-203ENST00000565248 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.71■■□□□ 1.23
THUMPD1-203ENST00000565248 SF3B2Q13435 895 aaKnown RBP22.71■■□□□ 1.23
THUMPD1-203ENST00000565248 UNC5CLQ8IV45 518 aa22.71■■□□□ 1.23
THUMPD1-203ENST00000565248 BLMP54132 1417 aaPredicted RBP22.71■■□□□ 1.23
THUMPD1-203ENST00000565248 CDCA8Q53HL2 280 aa22.7■■□□□ 1.22
THUMPD1-203ENST00000565248 WASHC2AQ641Q2 1341 aa22.7■■□□□ 1.22
THUMPD1-203ENST00000565248 TESK2Q96S53 571 aa22.69■■□□□ 1.22
THUMPD1-203ENST00000565248 STK26Q9P289 416 aa22.69■■□□□ 1.22
THUMPD1-203ENST00000565248 SBNO2Q9Y2G9 1366 aa22.68■■□□□ 1.22
THUMPD1-203ENST00000565248 KIF7Q2M1P5 1343 aa22.68■■□□□ 1.22
THUMPD1-203ENST00000565248 ABCC11Q96J66 1382 aa22.66■■□□□ 1.22
THUMPD1-203ENST00000565248 NUTM2FA1L443 756 aa22.66■■□□□ 1.22
THUMPD1-203ENST00000565248 DDX10Q13206 875 aaKnown RBP22.66■■□□□ 1.22
THUMPD1-203ENST00000565248 DLC1Q96QB1 1528 aa22.66■■□□□ 1.22
THUMPD1-203ENST00000565248 C11orf95C9JLR9 678 aaPredicted RBP22.65■■□□□ 1.22
THUMPD1-203ENST00000565248 HAP1P54257 671 aaPredicted RBP22.65■■□□□ 1.22
THUMPD1-203ENST00000565248 POLR3GLQ9BT43 218 aa22.65■■□□□ 1.22
THUMPD1-203ENST00000565248 POGKQ9P215 609 aa22.65■■□□□ 1.22
THUMPD1-203ENST00000565248 SLIT2O94813 1529 aa22.64■■□□□ 1.21
THUMPD1-203ENST00000565248 ARHGEF28Q8N1W1 1705 aaKnown RBP22.64■■□□□ 1.21
THUMPD1-203ENST00000565248 GLI3P10071 1580 aa22.63■■□□□ 1.21
THUMPD1-203ENST00000565248 SPATA31A3Q5VYP0 1347 aa22.62■■□□□ 1.21
THUMPD1-203ENST00000565248 WAPLQ7Z5K2 1190 aa22.62■■□□□ 1.21
THUMPD1-203ENST00000565248 SIRT1Q96EB6 747 aa22.62■■□□□ 1.21
THUMPD1-203ENST00000565248 KIF1AQ12756 1690 aa22.62■■□□□ 1.21
THUMPD1-203ENST00000565248 BRWD3Q6RI45 1802 aa22.61■■□□□ 1.21
THUMPD1-203ENST00000565248 TECPR2O15040 1411 aa22.61■■□□□ 1.21
THUMPD1-203ENST00000565248 QRICH2Q9H0J4 1663 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms