RNA–Protein interactions for RNA: ENST00000564581.1

SUB1P3-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 3, humanhuman

BASIC

Gene SUB1P3, Length 315 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P3-201ENST00000564581 USB1Q9BQ65 265 aaKnown RBP6.58□□□□□ -1.36
SUB1P3-201ENST00000564581 PKD2L1Q9P0L9 805 aa6.58□□□□□ -1.36
SUB1P3-201ENST00000564581 Q3C1V9 767 aa6.57□□□□□ -1.36
SUB1P3-201ENST00000564581 NDUFV2P19404 249 aa6.56□□□□□ -1.36
SUB1P3-201ENST00000564581 USP46P62068 366 aa6.56□□□□□ -1.36
SUB1P3-201ENST00000564581 GIGYF2Q6Y7W6 1299 aaKnown RBP6.56□□□□□ -1.36
SUB1P3-201ENST00000564581 SPIRE2Q8WWL2 714 aa6.56□□□□□ -1.36
SUB1P3-201ENST00000564581 PCDHGC3Q9UN70 934 aa6.56□□□□□ -1.36
SUB1P3-201ENST00000564581 FAM187AA6NFU0 413 aa6.55□□□□□ -1.36
SUB1P3-201ENST00000564581 TRIM66O15016 1216 aa6.55□□□□□ -1.36
SUB1P3-201ENST00000564581 RPIAP49247 311 aa6.55□□□□□ -1.36
SUB1P3-201ENST00000564581 MMP16P51512 607 aa6.55□□□□□ -1.36
SUB1P3-201ENST00000564581 PRR20EP86478 221 aa6.55□□□□□ -1.36
SUB1P3-201ENST00000564581 PRR20CP86479 221 aa6.55□□□□□ -1.36
SUB1P3-201ENST00000564581 PRR20DP86480 221 aa6.55□□□□□ -1.36
SUB1P3-201ENST00000564581 PRR20BP86481 221 aa6.55□□□□□ -1.36
SUB1P3-201ENST00000564581 PRR20AP86496 221 aa6.55□□□□□ -1.36
SUB1P3-201ENST00000564581 AMHR2Q16671 573 aa6.55□□□□□ -1.36
SUB1P3-201ENST00000564581 CCDC24Q8N4L8 307 aa6.55□□□□□ -1.36
SUB1P3-201ENST00000564581 MOXD2PA6NHM9 499 aa6.54□□□□□ -1.36
SUB1P3-201ENST00000564581 CD2BP2O95400 341 aaKnown RBP6.54□□□□□ -1.36
SUB1P3-201ENST00000564581 FDX1P10109 184 aa6.54□□□□□ -1.36
SUB1P3-201ENST00000564581 PKDCCQ504Y2 493 aa6.54□□□□□ -1.36
SUB1P3-201ENST00000564581 PARP9Q8IXQ6 854 aa6.54□□□□□ -1.36
SUB1P3-201ENST00000564581 ZBTB24O43167 697 aaPredicted RBP6.53□□□□□ -1.36
SUB1P3-201ENST00000564581 DXOO77932 396 aaKnown RBP6.53□□□□□ -1.36
SUB1P3-201ENST00000564581 MS4A1P11836 297 aa6.53□□□□□ -1.36
SUB1P3-201ENST00000564581 MYT1Q01538 1121 aa6.53□□□□□ -1.36
SUB1P3-201ENST00000564581 BEGAINQ9BUH8 593 aa6.53□□□□□ -1.36
SUB1P3-201ENST00000564581 SLC24A3Q9HC58 644 aa6.53□□□□□ -1.36
SUB1P3-201ENST00000564581 C6orf229H3BNL8 230 aa6.52□□□□□ -1.37
SUB1P3-201ENST00000564581 DGAT1O75907 488 aa6.52□□□□□ -1.37
SUB1P3-201ENST00000564581 POTECB2RU33 542 aa6.51□□□□□ -1.37
SUB1P3-201ENST00000564581 ST8SIA5O15466 376 aa6.51□□□□□ -1.37
SUB1P3-201ENST00000564581 TRIM32Q13049 653 aa6.51□□□□□ -1.37
SUB1P3-201ENST00000564581 AK7Q96M32 723 aa6.51□□□□□ -1.37
SUB1P3-201ENST00000564581 JUNDP17535 347 aa6.5□□□□□ -1.37
SUB1P3-201ENST00000564581 ZNF787Q6DD87 383 aa6.5□□□□□ -1.37
SUB1P3-201ENST00000564581 PTCRAQ6ISU1 281 aaPredicted RBP6.5□□□□□ -1.37
SUB1P3-201ENST00000564581 RETREG3Q86VR2 466 aa6.5□□□□□ -1.37
SUB1P3-201ENST00000564581 TBC1D2Q9BYX2 928 aa6.5□□□□□ -1.37
SUB1P3-201ENST00000564581 TOR4AQ9NXH8 423 aa6.5□□□□□ -1.37
SUB1P3-201ENST00000564581 SKOR1P84550 965 aa6.49□□□□□ -1.37
SUB1P3-201ENST00000564581 CYP4X1Q8N118 509 aa6.49□□□□□ -1.37
SUB1P3-201ENST00000564581 PCDHB15Q9Y5E8 787 aa6.49□□□□□ -1.37
SUB1P3-201ENST00000564581 PDE4DQ08499 809 aa6.48□□□□□ -1.37
SUB1P3-201ENST00000564581 MRGPRX2Q96LB1 330 aa6.48□□□□□ -1.37
SUB1P3-201ENST00000564581 NUDT12Q9BQG2 462 aa6.48□□□□□ -1.37
SUB1P3-201ENST00000564581 DACH1Q9UI36 760 aa6.48□□□□□ -1.37
SUB1P3-201ENST00000564581 TTC24A2A3L6 582 aaPredicted RBP6.47□□□□□ -1.37
SUB1P3-201ENST00000564581 AAASQ9NRG9 546 aa6.47□□□□□ -1.37
SUB1P3-201ENST00000564581 J3QL48 77 aa6.46□□□□□ -1.38
SUB1P3-201ENST00000564581 WNT7AO00755 349 aa6.46□□□□□ -1.38
SUB1P3-201ENST00000564581 CSPP1Q1MSJ5 1256 aa6.46□□□□□ -1.38
SUB1P3-201ENST00000564581 RSBN1LQ6PCB5 846 aaPredicted RBP6.46□□□□□ -1.38
SUB1P3-201ENST00000564581 PRR7Q8TB68 274 aa6.46□□□□□ -1.38
SUB1P3-201ENST00000564581 MTMR2Q13614 643 aa6.45□□□□□ -1.38
SUB1P3-201ENST00000564581 RC3H1Q5TC82 1133 aaKnown RBP6.45□□□□□ -1.38
SUB1P3-201ENST00000564581 SMPD1P17405 629 aa6.44□□□□□ -1.38
SUB1P3-201ENST00000564581 RIC3Q7Z5B4 369 aa6.44□□□□□ -1.38
SUB1P3-201ENST00000564581 CABLES1Q8TDN4 633 aa6.44□□□□□ -1.38
SUB1P3-201ENST00000564581 CFAP99D6REC4 459 aa6.43□□□□□ -1.38
SUB1P3-201ENST00000564581 SPTLC1O15269 473 aa6.43□□□□□ -1.38
SUB1P3-201ENST00000564581 CCNYL3P0C7X3 344 aa6.43□□□□□ -1.38
SUB1P3-201ENST00000564581 HRCP23327 699 aa6.43□□□□□ -1.38
SUB1P3-201ENST00000564581 SNIP1Q8TAD8 396 aaKnown RBP6.43□□□□□ -1.38
SUB1P3-201ENST00000564581 LIMD1Q9UGP4 676 aa6.43□□□□□ -1.38
SUB1P3-201ENST00000564581 AVPP01185 164 aa6.42□□□□□ -1.38
SUB1P3-201ENST00000564581 SH3BP2P78314 561 aa6.42□□□□□ -1.38
SUB1P3-201ENST00000564581 LINC01559Q495D7 138 aa6.42□□□□□ -1.38
SUB1P3-201ENST00000564581 MYSM1Q5VVJ2 828 aa6.42□□□□□ -1.38
SUB1P3-201ENST00000564581 HPS1Q92902 700 aa6.42□□□□□ -1.38
SUB1P3-201ENST00000564581 ZNF775Q96BV0 537 aaPredicted RBP6.42□□□□□ -1.38
SUB1P3-201ENST00000564581 EVA1BQ9NVM1 165 aa6.42□□□□□ -1.38
SUB1P3-201ENST00000564581 AXIN1O15169 862 aa6.41□□□□□ -1.38
SUB1P3-201ENST00000564581 WNT7BP56706 349 aa6.41□□□□□ -1.38
SUB1P3-201ENST00000564581 QPCTQ16769 361 aa6.41□□□□□ -1.38
SUB1P3-201ENST00000564581 PTPRNQ16849 979 aa6.41□□□□□ -1.38
SUB1P3-201ENST00000564581 BAP1Q92560 729 aa6.41□□□□□ -1.38
SUB1P3-201ENST00000564581 UNC93B1Q9H1C4 597 aa6.41□□□□□ -1.38
SUB1P3-201ENST00000564581 KCNH2Q12809 1159 aa6.4□□□□□ -1.38
SUB1P3-201ENST00000564581 DIXDC1Q155Q3 683 aa6.4□□□□□ -1.38
SUB1P3-201ENST00000564581 GMPR2Q9P2T1 348 aaKnown RBP6.4□□□□□ -1.38
SUB1P3-201ENST00000564581 SPDYE5A6NIY4 337 aa6.39□□□□□ -1.39
SUB1P3-201ENST00000564581 PER1O15534 1290 aaPredicted RBP6.39□□□□□ -1.39
SUB1P3-201ENST00000564581 ALDH1A1P00352 501 aa6.39□□□□□ -1.39
SUB1P3-201ENST00000564581 CTHP32929 405 aa6.39□□□□□ -1.39
SUB1P3-201ENST00000564581 GJA5P36382 358 aa6.39□□□□□ -1.39
SUB1P3-201ENST00000564581 EHBP1Q8NDI1 1231 aa6.39□□□□□ -1.39
SUB1P3-201ENST00000564581 TSC1Q92574 1164 aa6.39□□□□□ -1.39
SUB1P3-201ENST00000564581 ZBTB3Q9H5J0 574 aa6.39□□□□□ -1.39
SUB1P3-201ENST00000564581 GPBP1L1Q9HC44 474 aaPredicted RBP6.39□□□□□ -1.39
SUB1P3-201ENST00000564581 POLR3EQ9NVU0 708 aa6.39□□□□□ -1.39
SUB1P3-201ENST00000564581 MAP10Q9P2G4 905 aa6.39□□□□□ -1.39
SUB1P3-201ENST00000564581 NUTM2BA6NNL0 878 aaPredicted RBP6.38□□□□□ -1.39
SUB1P3-201ENST00000564581 NUTM2EB1AL46 878 aaPredicted RBP6.38□□□□□ -1.39
SUB1P3-201ENST00000564581 SIAH2O43255 324 aa6.38□□□□□ -1.39
SUB1P3-201ENST00000564581 SLC24A1O60721 1099 aa6.38□□□□□ -1.39
SUB1P3-201ENST00000564581 RTL5Q5HYW3 569 aaPredicted RBP6.38□□□□□ -1.39
SUB1P3-201ENST00000564581 NUTM2DQ5VT03 806 aaPredicted RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms