RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 NGEFQ8N5V2 710 aa26.18■■□□□ 1.78
MSLN-205ENST00000563941 ARHGAP31Q2M1Z3 1444 aa26.17■■□□□ 1.78
MSLN-205ENST00000563941 VGFO15240 615 aaPredicted RBP26.16■■□□□ 1.78
MSLN-205ENST00000563941 E9PSI1 815 aa26.15■■□□□ 1.78
MSLN-205ENST00000563941 NUTM2DQ5VT03 806 aaPredicted RBP26.15■■□□□ 1.78
MSLN-205ENST00000563941 BACH2Q9BYV9 841 aa26.15■■□□□ 1.78
MSLN-205ENST00000563941 KDM2BQ8NHM5 1336 aa26.14■■□□□ 1.77
MSLN-205ENST00000563941 TULP4Q9NRJ4 1543 aa26.13■■□□□ 1.77
MSLN-205ENST00000563941 TNNT2P45379 298 aaPredicted RBP26.11■■□□□ 1.77
MSLN-205ENST00000563941 EVC2Q86UK5 1308 aa26.11■■□□□ 1.77
MSLN-205ENST00000563941 ZBTB47Q9UFB7 747 aaPredicted RBP26.11■■□□□ 1.77
MSLN-205ENST00000563941 DMRT2Q9Y5R5 561 aa26.11■■□□□ 1.77
MSLN-205ENST00000563941 YEATS2Q9ULM3 1422 aa26.1■■□□□ 1.77
MSLN-205ENST00000563941 SKAP1Q86WV1 359 aa26.1■■□□□ 1.77
MSLN-205ENST00000563941 PUS7Q96PZ0 661 aaKnown RBP26.1■■□□□ 1.77
MSLN-205ENST00000563941 CGNL1Q0VF96 1302 aa26.1■■□□□ 1.77
MSLN-205ENST00000563941 CENPQQ7L2Z9 268 aaPredicted RBP26.09■■□□□ 1.77
MSLN-205ENST00000563941 IDI1Q13907 227 aa26.09■■□□□ 1.77
MSLN-205ENST00000563941 NPM2Q86SE8 214 aaKnown RBP26.08■■□□□ 1.77
MSLN-205ENST00000563941 MYO5BQ9ULV0 1848 aa26.08■■□□□ 1.77
MSLN-205ENST00000563941 ANKRD36BQ8N2N9 1353 aa26.07■■□□□ 1.76
MSLN-205ENST00000563941 WWC1Q8IX03 1113 aa26.06■■□□□ 1.76
MSLN-205ENST00000563941 ZFYVE9O95405 1425 aa26.06■■□□□ 1.76
MSLN-205ENST00000563941 PREX1Q8TCU6 1659 aa26.06■■□□□ 1.76
MSLN-205ENST00000563941 BCAR3O75815 825 aa26.05■■□□□ 1.76
MSLN-205ENST00000563941 SLC52A1Q9NWF4 448 aa26.05■■□□□ 1.76
MSLN-205ENST00000563941 IQSEC2Q5JU85 1478 aa26.04■■□□□ 1.76
MSLN-205ENST00000563941 RUNDC1Q96C34 613 aa26.04■■□□□ 1.76
MSLN-205ENST00000563941 NSD2O96028 1365 aa26.03■■□□□ 1.76
MSLN-205ENST00000563941 TMEM131LA2VDJ0 1609 aa26.02■■□□□ 1.76
MSLN-205ENST00000563941 MTHFSP49914 203 aa26.02■■□□□ 1.76
MSLN-205ENST00000563941 FAM69CQ0P6D2 419 aa26.02■■□□□ 1.76
MSLN-205ENST00000563941 CABP2Q9NPB3 220 aa26.01■■□□□ 1.75
MSLN-205ENST00000563941 CFAP53Q96M91 514 aa26■■□□□ 1.75
MSLN-205ENST00000563941 SAFB2Q14151 953 aaKnown RBP eCLIP25.99■■□□□ 1.75
MSLN-205ENST00000563941 DIP2BQ9P265 1576 aa25.99■■□□□ 1.75
MSLN-205ENST00000563941 TCP11L2Q8N4U5 519 aa25.98■■□□□ 1.75
MSLN-205ENST00000563941 NEUROD2Q15784 382 aa25.97■■□□□ 1.75
MSLN-205ENST00000563941 RRP7AQ9Y3A4 280 aaKnown RBP25.97■■□□□ 1.75
MSLN-205ENST00000563941 STK26Q9P289 416 aa25.97■■□□□ 1.75
MSLN-205ENST00000563941 NBR1Q14596 966 aa25.96■■□□□ 1.75
MSLN-205ENST00000563941 PHF23Q9BUL5 403 aaPredicted RBP25.96■■□□□ 1.75
MSLN-205ENST00000563941 NINLQ9Y2I6 1382 aa25.95■■□□□ 1.75
MSLN-205ENST00000563941 PTPRMP28827 1452 aa25.95■■□□□ 1.74
MSLN-205ENST00000563941 SENP3Q9H4L4 574 aaPredicted RBP25.94■■□□□ 1.74
MSLN-205ENST00000563941 A0A1W2PP64 1363 aa25.93■■□□□ 1.74
MSLN-205ENST00000563941 PDE3AQ14432 1141 aa25.93■■□□□ 1.74
MSLN-205ENST00000563941 ABCC11Q96J66 1382 aa25.93■■□□□ 1.74
MSLN-205ENST00000563941 SRPK2P78362 688 aaKnown RBP25.92■■□□□ 1.74
MSLN-205ENST00000563941 WDR63Q8IWG1 891 aa25.91■■□□□ 1.74
MSLN-205ENST00000563941 CLTCQ00610 1675 aaKnown RBP25.91■■□□□ 1.74
MSLN-205ENST00000563941 CCDC27Q2M243 656 aa25.9■■□□□ 1.74
MSLN-205ENST00000563941 YTHDC2Q9H6S0 1430 aaKnown RBP25.9■■□□□ 1.74
MSLN-205ENST00000563941 CANXP27824 592 aaKnown RBP25.9■■□□□ 1.74
MSLN-205ENST00000563941 FBXO31Q5XUX0 539 aaPredicted RBP25.88■■□□□ 1.73
MSLN-205ENST00000563941 ATAD2Q6PL18 1390 aa25.88■■□□□ 1.73
MSLN-205ENST00000563941 ADGRB2O60241 1585 aa25.87■■□□□ 1.73
MSLN-205ENST00000563941 U2AF1L5P0DN76 240 aaPredicted RBP25.87■■□□□ 1.73
MSLN-205ENST00000563941 U2AF1Q01081 240 aaKnown RBP eCLIP25.87■■□□□ 1.73
MSLN-205ENST00000563941 PRAM1Q96QH2 718 aa25.87■■□□□ 1.73
MSLN-205ENST00000563941 MINK1Q8N4C8 1332 aaPredicted RBP25.87■■□□□ 1.73
MSLN-205ENST00000563941 ANKRD26Q9UPS8 1709 aa25.87■■□□□ 1.73
MSLN-205ENST00000563941 RARSP54136 660 aaKnown RBP25.86■■□□□ 1.73
MSLN-205ENST00000563941 FAM161AQ3B820 660 aa25.86■■□□□ 1.73
MSLN-205ENST00000563941 ALKQ9UM73 1620 aa25.86■■□□□ 1.73
MSLN-205ENST00000563941 NCBP3Q53F19 620 aaKnown RBP25.85■■□□□ 1.73
MSLN-205ENST00000563941 PANK1Q8TE04 598 aa25.85■■□□□ 1.73
MSLN-205ENST00000563941 TSPOAP1O95153 1857 aa25.85■■□□□ 1.73
MSLN-205ENST00000563941 POGKQ9P215 609 aa25.85■■□□□ 1.73
MSLN-205ENST00000563941 COG6Q9Y2V7 657 aa25.84■■□□□ 1.73
MSLN-205ENST00000563941 RGS3P49796 1198 aa25.84■■□□□ 1.73
MSLN-205ENST00000563941 C8orf34Q49A92 452 aa25.84■■□□□ 1.73
MSLN-205ENST00000563941 FRAT1Q92837 279 aaPredicted RBP25.84■■□□□ 1.73
MSLN-205ENST00000563941 GGNBP2Q9H3C7 697 aa25.84■■□□□ 1.73
MSLN-205ENST00000563941 CD163L1Q9NR16 1453 aa25.83■■□□□ 1.73
MSLN-205ENST00000563941 CLUAP1Q96AJ1 413 aa25.83■■□□□ 1.73
MSLN-205ENST00000563941 DDRGK1Q96HY6 314 aa25.83■■□□□ 1.73
MSLN-205ENST00000563941 TERF2IPQ9NYB0 399 aa25.83■■□□□ 1.73
MSLN-205ENST00000563941 IGHDP01880 384 aa25.82■■□□□ 1.72
MSLN-205ENST00000563941 MED14O60244 1454 aa25.81■■□□□ 1.72
MSLN-205ENST00000563941 COL3A1P02461 1466 aaPredicted RBP25.81■■□□□ 1.72
MSLN-205ENST00000563941 MYH16Q9H6N6 1097 aa25.81■■□□□ 1.72
MSLN-205ENST00000563941 REREQ9P2R6 1566 aa25.8■■□□□ 1.72
MSLN-205ENST00000563941 DEKP35659 375 aaKnown RBP25.79■■□□□ 1.72
MSLN-205ENST00000563941 STAG3Q9UJ98 1225 aa25.79■■□□□ 1.72
MSLN-205ENST00000563941 NLRP1Q9C000 1473 aa25.79■■□□□ 1.72
MSLN-205ENST00000563941 FYB1O15117 783 aa25.78■■□□□ 1.72
MSLN-205ENST00000563941 RTL5Q5HYW3 569 aaPredicted RBP25.78■■□□□ 1.72
MSLN-205ENST00000563941 AGLP35573 1532 aa25.77■■□□□ 1.72
MSLN-205ENST00000563941 ARHGEF40Q8TER5 1519 aa25.77■■□□□ 1.72
MSLN-205ENST00000563941 U2SURPO15042 1029 aaKnown RBP25.76■■□□□ 1.71
MSLN-205ENST00000563941 KIF20BQ96Q89 1820 aa25.75■■□□□ 1.71
MSLN-205ENST00000563941 CDK19Q9BWU1 502 aa25.75■■□□□ 1.71
MSLN-205ENST00000563941 BCL2L13Q9BXK5 485 aa25.75■■□□□ 1.71
MSLN-205ENST00000563941 HDGFL2Q7Z4V5 671 aaPredicted RBP25.75■■□□□ 1.71
MSLN-205ENST00000563941 PLEKHF1Q96S99 279 aa25.75■■□□□ 1.71
MSLN-205ENST00000563941 VIRMAQ69YN4 1812 aaKnown RBP25.74■■□□□ 1.71
MSLN-205ENST00000563941 AAMPQ13685 434 aa25.73■■□□□ 1.71
MSLN-205ENST00000563941 PPP6R1Q9UPN7 881 aa25.73■■□□□ 1.71
MSLN-205ENST00000563941 LAS1LQ9Y4W2 734 aaKnown RBP25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms