RNA–Protein interactions for RNA: ENST00000563732.5

PPP4C-207, Transcript of protein phosphatase 4 catalytic subunit, humanhuman

TSL 2

Gene PPP4C, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4C-207ENST00000563732 MSH6P52701 1360 aa29.88■■■□□ 2.37
PPP4C-207ENST00000563732 MST1RQ04912 1400 aa29.88■■■□□ 2.37
PPP4C-207ENST00000563732 FMN2Q9NZ56 1722 aa29.87■■■□□ 2.37
PPP4C-207ENST00000563732 SAFB2Q14151 953 aaKnown RBP eCLIP29.86■■■□□ 2.37
PPP4C-207ENST00000563732 USP32Q8NFA0 1604 aa29.85■■■□□ 2.37
PPP4C-207ENST00000563732 CARD11Q9BXL7 1154 aa29.84■■■□□ 2.37
PPP4C-207ENST00000563732 TULP4Q9NRJ4 1543 aa29.81■■■□□ 2.36
PPP4C-207ENST00000563732 UBAP1LF5GYI3 381 aa29.8■■■□□ 2.36
PPP4C-207ENST00000563732 CENPJQ9HC77 1338 aaPredicted RBP29.79■■■□□ 2.36
PPP4C-207ENST00000563732 MINK1Q8N4C8 1332 aaPredicted RBP29.78■■■□□ 2.36
PPP4C-207ENST00000563732 POGKQ9P215 609 aa29.78■■■□□ 2.36
PPP4C-207ENST00000563732 RGPD8O14715 1765 aaPredicted RBP29.77■■■□□ 2.36
PPP4C-207ENST00000563732 ROBO1Q9Y6N7 1651 aa29.77■■■□□ 2.36
PPP4C-207ENST00000563732 C1orf167Q5SNV9 1468 aa29.77■■■□□ 2.36
PPP4C-207ENST00000563732 C14orf37Q86TY3 774 aa29.77■■■□□ 2.36
PPP4C-207ENST00000563732 HIRIP3Q9BW71 556 aaPredicted RBP29.77■■■□□ 2.36
PPP4C-207ENST00000563732 FBXO41Q8TF61 875 aa29.75■■■□□ 2.35
PPP4C-207ENST00000563732 USP47Q96K76 1375 aa29.75■■■□□ 2.35
PPP4C-207ENST00000563732 CADPS2Q86UW7 1296 aa29.74■■■□□ 2.35
PPP4C-207ENST00000563732 TESK2Q96S53 571 aa29.74■■■□□ 2.35
PPP4C-207ENST00000563732 SLAIN2Q9P270 581 aa29.74■■■□□ 2.35
PPP4C-207ENST00000563732 SBNO2Q9Y2G9 1366 aa29.74■■■□□ 2.35
PPP4C-207ENST00000563732 PRR36Q9H6K5 1346 aa29.73■■■□□ 2.35
PPP4C-207ENST00000563732 TOM1O60784 492 aa29.72■■■□□ 2.35
PPP4C-207ENST00000563732 ATF3P18847 181 aa29.71■■■□□ 2.35
PPP4C-207ENST00000563732 TOPAZ1Q8N9V7 1692 aa29.7■■■□□ 2.35
PPP4C-207ENST00000563732 ATP7BP35670 1465 aa29.7■■■□□ 2.35
PPP4C-207ENST00000563732 EIF3AQ14152 1382 aaKnown RBP29.69■■■□□ 2.34
PPP4C-207ENST00000563732 WASLO00401 505 aaPredicted RBP29.69■■■□□ 2.34
PPP4C-207ENST00000563732 ST20-MTHFSA0A0A6YYL1 179 aa29.68■■■□□ 2.34
PPP4C-207ENST00000563732 BRINP3Q76B58 766 aa29.67■■■□□ 2.34
PPP4C-207ENST00000563732 PIP4K2BP78356 416 aa29.66■■■□□ 2.34
PPP4C-207ENST00000563732 NHSL1Q5SYE7 1610 aa29.66■■■□□ 2.34
PPP4C-207ENST00000563732 ANKARQ7Z5J8 1434 aa29.65■■■□□ 2.34
PPP4C-207ENST00000563732 ORAI2Q96SN7 254 aa29.65■■■□□ 2.34
PPP4C-207ENST00000563732 NUTM2FA1L443 756 aa29.64■■■□□ 2.34
PPP4C-207ENST00000563732 CDK19Q9BWU1 502 aa29.63■■■□□ 2.33
PPP4C-207ENST00000563732 AHDC1Q5TGY3 1603 aaPredicted RBP29.63■■■□□ 2.33
PPP4C-207ENST00000563732 ILDR1Q86SU0 546 aaPredicted RBP29.61■■■□□ 2.33
PPP4C-207ENST00000563732 DISP3Q9P2K9 1392 aa29.59■■■□□ 2.33
PPP4C-207ENST00000563732 COL16A1Q07092 1604 aaPredicted RBP29.59■■■□□ 2.33
PPP4C-207ENST00000563732 HSPA5P11021 654 aaKnown RBP29.58■■■□□ 2.33
PPP4C-207ENST00000563732 DDX17Q92841 729 aaKnown RBP29.57■■■□□ 2.32
PPP4C-207ENST00000563732 CABP2Q9NPB3 220 aa29.57■■■□□ 2.32
PPP4C-207ENST00000563732 KIF1AQ12756 1690 aa29.56■■■□□ 2.32
PPP4C-207ENST00000563732 ITSN1Q15811 1721 aa29.55■■■□□ 2.32
PPP4C-207ENST00000563732 NUDT16Q96DE0 195 aaKnown RBP29.54■■■□□ 2.32
PPP4C-207ENST00000563732 HSPA1LP34931 641 aa29.53■■■□□ 2.32
PPP4C-207ENST00000563732 PHLPP1O60346 1717 aa29.53■■■□□ 2.32
PPP4C-207ENST00000563732 PXDNQ92626 1479 aa29.53■■■□□ 2.32
PPP4C-207ENST00000563732 SCAF1Q9H7N4 1312 aaKnown RBP29.52■■■□□ 2.32
PPP4C-207ENST00000563732 EVC2Q86UK5 1308 aa29.51■■■□□ 2.32
PPP4C-207ENST00000563732 ESCO1Q5FWF5 840 aa29.5■■■□□ 2.31
PPP4C-207ENST00000563732 EIF4G2P78344 907 aaKnown RBP eCLIP29.49■■■□□ 2.31
PPP4C-207ENST00000563732 TRPM3Q9HCF6 1732 aaPredicted RBP29.48■■■□□ 2.31
PPP4C-207ENST00000563732 PHF8Q9UPP1 1060 aa29.47■■■□□ 2.31
PPP4C-207ENST00000563732 MYOM1P52179 1685 aa29.47■■■□□ 2.31
PPP4C-207ENST00000563732 C11orf95C9JLR9 678 aaPredicted RBP29.46■■■□□ 2.31
PPP4C-207ENST00000563732 POLR3AO14802 1390 aaPredicted RBP29.46■■■□□ 2.31
PPP4C-207ENST00000563732 CD163L1Q9NR16 1453 aa29.46■■■□□ 2.31
PPP4C-207ENST00000563732 SOS2Q07890 1332 aaPredicted RBP29.45■■■□□ 2.31
PPP4C-207ENST00000563732 PPIP5K1Q6PFW1 1433 aa29.45■■■□□ 2.31
PPP4C-207ENST00000563732 PLEKHG3A1L390 1219 aa29.45■■■□□ 2.31
PPP4C-207ENST00000563732 SRPK2P78362 688 aaKnown RBP29.45■■■□□ 2.31
PPP4C-207ENST00000563732 PMFBP1Q8TBY8 1022 aa29.44■■■□□ 2.3
PPP4C-207ENST00000563732 CCDC61Q9Y6R9 512 aa29.44■■■□□ 2.3
PPP4C-207ENST00000563732 FOXO3O43524 673 aa29.43■■■□□ 2.3
PPP4C-207ENST00000563732 PUS7Q96PZ0 661 aaKnown RBP29.42■■■□□ 2.3
PPP4C-207ENST00000563732 AKAP12Q02952 1782 aa29.41■■■□□ 2.3
PPP4C-207ENST00000563732 ATAD2Q6PL18 1390 aa29.4■■■□□ 2.3
PPP4C-207ENST00000563732 XPCQ01831 940 aaPredicted RBP29.39■■■□□ 2.3
PPP4C-207ENST00000563732 CABP1Q9NZU7 370 aa29.39■■■□□ 2.3
PPP4C-207ENST00000563732 CPSF1Q10570 1443 aaKnown RBP29.38■■■□□ 2.29
PPP4C-207ENST00000563732 NRKQ7Z2Y5 1582 aa29.38■■■□□ 2.29
PPP4C-207ENST00000563732 ACEP12821 1306 aa29.37■■■□□ 2.29
PPP4C-207ENST00000563732 ALS2Q96Q42 1657 aa29.37■■■□□ 2.29
PPP4C-207ENST00000563732 SSH2Q76I76 1423 aa29.37■■■□□ 2.29
PPP4C-207ENST00000563732 TMF1P82094 1093 aa29.36■■■□□ 2.29
PPP4C-207ENST00000563732 NPHP3Q7Z494 1330 aa29.36■■■□□ 2.29
PPP4C-207ENST00000563732 SHPRHQ149N8 1683 aa29.35■■■□□ 2.29
PPP4C-207ENST00000563732 MON2Q7Z3U7 1717 aa29.35■■■□□ 2.29
PPP4C-207ENST00000563732 ZEB1P37275 1124 aaPredicted RBP29.33■■■□□ 2.29
PPP4C-207ENST00000563732 SLC12A5Q9H2X9 1139 aa29.33■■■□□ 2.29
PPP4C-207ENST00000563732 COL22A1Q8NFW1 1626 aaPredicted RBP29.31■■■□□ 2.28
PPP4C-207ENST00000563732 KRT28Q7Z3Y7 464 aa29.31■■■□□ 2.28
PPP4C-207ENST00000563732 USP6P35125 1406 aa29.3■■■□□ 2.28
PPP4C-207ENST00000563732 SBNO1A3KN83 1393 aa29.3■■■□□ 2.28
PPP4C-207ENST00000563732 PNPLA6Q8IY17 1366 aa29.3■■■□□ 2.28
PPP4C-207ENST00000563732 CRYBG1Q9Y4K1 1723 aa29.29■■■□□ 2.28
PPP4C-207ENST00000563732 SPATA31A3Q5VYP0 1347 aa29.28■■■□□ 2.28
PPP4C-207ENST00000563732 SLC24A1O60721 1099 aa29.28■■■□□ 2.28
PPP4C-207ENST00000563732 TNS3Q68CZ2 1445 aa29.28■■■□□ 2.28
PPP4C-207ENST00000563732 A0A1W2PP64 1363 aa29.27■■■□□ 2.28
PPP4C-207ENST00000563732 KIF7Q2M1P5 1343 aa29.27■■■□□ 2.28
PPP4C-207ENST00000563732 MARF1Q9Y4F3 1742 aaKnown RBP29.27■■■□□ 2.28
PPP4C-207ENST00000563732 NGDNQ8NEJ9 315 aaKnown RBP29.26■■■□□ 2.27
PPP4C-207ENST00000563732 ABCA3Q99758 1704 aa29.25■■■□□ 2.27
PPP4C-207ENST00000563732 JCADQ9P266 1359 aa29.25■■■□□ 2.27
PPP4C-207ENST00000563732 PIK3C2AO00443 1686 aa29.25■■■□□ 2.27
PPP4C-207ENST00000563732 NINLQ9Y2I6 1382 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms