RNA–Protein interactions for RNA: ENST00000563028.1

KIFC3-213, Transcript of kinesin family member C3, humanhuman

TSL 4

Gene KIFC3, Length 681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFC3-213ENST00000563028 DHX57Q6P158 1386 aaKnown RBP34.24■■■■□ 3.07
KIFC3-213ENST00000563028 PLEKHH1Q9ULM0 1364 aa34.24■■■■□ 3.07
KIFC3-213ENST00000563028 SPATA31A6Q5VVP1 1343 aa34.24■■■■□ 3.07
KIFC3-213ENST00000563028 ORAI2Q96SN7 254 aa34.23■■■■□ 3.07
KIFC3-213ENST00000563028 CDC42BPGQ6DT37 1551 aa34.22■■■■□ 3.07
KIFC3-213ENST00000563028 SIRT1Q96EB6 747 aa34.21■■■■□ 3.07
KIFC3-213ENST00000563028 SHPRHQ149N8 1683 aa34.21■■■■□ 3.07
KIFC3-213ENST00000563028 LRRC59Q96AG4 307 aaKnown RBP34.18■■■■□ 3.06
KIFC3-213ENST00000563028 STAC3Q96MF2 364 aa34.18■■■■□ 3.06
KIFC3-213ENST00000563028 LRP6O75581 1613 aa34.15■■■■□ 3.06
KIFC3-213ENST00000563028 ESCO1Q5FWF5 840 aa34.14■■■■□ 3.06
KIFC3-213ENST00000563028 MEX3CQ5U5Q3 659 aaKnown RBP34.13■■■■□ 3.05
KIFC3-213ENST00000563028 NUTM2FA1L443 756 aa34.12■■■■□ 3.05
KIFC3-213ENST00000563028 NUTM2BA6NNL0 878 aaPredicted RBP34.11■■■■□ 3.05
KIFC3-213ENST00000563028 NUTM2EB1AL46 878 aaPredicted RBP34.11■■■■□ 3.05
KIFC3-213ENST00000563028 NUTM2AQ8IVF1 878 aaPredicted RBP34.11■■■■□ 3.05
KIFC3-213ENST00000563028 PRAM1Q96QH2 718 aa34.11■■■■□ 3.05
KIFC3-213ENST00000563028 ADGRB1O14514 1584 aa34.11■■■■□ 3.05
KIFC3-213ENST00000563028 POTEAQ6S8J7 498 aa34.1■■■■□ 3.05
KIFC3-213ENST00000563028 SOS2Q07890 1332 aaPredicted RBP34.09■■■■□ 3.05
KIFC3-213ENST00000563028 SAFB2Q14151 953 aaKnown RBP eCLIP34.08■■■■□ 3.05
KIFC3-213ENST00000563028 POGKQ9P215 609 aa34.07■■■■□ 3.04
KIFC3-213ENST00000563028 DLC1Q96QB1 1528 aa34.07■■■■□ 3.04
KIFC3-213ENST00000563028 PNPLA6Q8IY17 1366 aa34.07■■■■□ 3.04
KIFC3-213ENST00000563028 TRAK1Q9UPV9 953 aa34.06■■■■□ 3.04
KIFC3-213ENST00000563028 FMN2Q9NZ56 1722 aa34.04■■■■□ 3.04
KIFC3-213ENST00000563028 NPHP3Q7Z494 1330 aa34.04■■■■□ 3.04
KIFC3-213ENST00000563028 FOXO3O43524 673 aa34.01■■■■□ 3.03
KIFC3-213ENST00000563028 XPCQ01831 940 aaPredicted RBP33.96■■■■□ 3.03
KIFC3-213ENST00000563028 ZNF772Q68DY9 489 aaPredicted RBP33.95■■■■□ 3.03
KIFC3-213ENST00000563028 PXDNQ92626 1479 aa33.95■■■■□ 3.02
KIFC3-213ENST00000563028 MINK1Q8N4C8 1332 aaPredicted RBP33.91■■■■□ 3.02
KIFC3-213ENST00000563028 HIRIP3Q9BW71 556 aaPredicted RBP33.91■■■■□ 3.02
KIFC3-213ENST00000563028 KIF1AQ12756 1690 aa33.9■■■■□ 3.02
KIFC3-213ENST00000563028 PHF8Q9UPP1 1060 aa33.9■■■■□ 3.02
KIFC3-213ENST00000563028 ADGRB2O60241 1585 aa33.89■■■■□ 3.02
KIFC3-213ENST00000563028 SIN3AQ96ST3 1273 aa33.89■■■■□ 3.02
KIFC3-213ENST00000563028 RGPD8O14715 1765 aaPredicted RBP33.89■■■■□ 3.02
KIFC3-213ENST00000563028 AFF2P51816 1311 aa33.88■■■■□ 3.01
KIFC3-213ENST00000563028 ADAMTS2O95450 1211 aa33.88■■■■□ 3.01
KIFC3-213ENST00000563028 C8orf37Q96NL8 207 aa33.88■■■■□ 3.01
KIFC3-213ENST00000563028 KIAA1210Q9ULL0 1709 aa33.86■■■■□ 3.01
KIFC3-213ENST00000563028 KRT28Q7Z3Y7 464 aa33.85■■■■□ 3.01
KIFC3-213ENST00000563028 COL22A1Q8NFW1 1626 aaPredicted RBP33.85■■■■□ 3.01
KIFC3-213ENST00000563028 ANKARQ7Z5J8 1434 aa33.85■■■■□ 3.01
KIFC3-213ENST00000563028 L3MBTL2Q969R5 705 aa33.84■■■■□ 3.01
KIFC3-213ENST00000563028 ARHGEF28Q8N1W1 1705 aaKnown RBP33.84■■■■□ 3.01
KIFC3-213ENST00000563028 NEUROD1Q13562 356 aa33.83■■■■□ 3.01
KIFC3-213ENST00000563028 NBPF1Q3BBV0 1214 aa33.83■■■■□ 3.01
KIFC3-213ENST00000563028 USP32Q8NFA0 1604 aa33.82■■■■□ 3
KIFC3-213ENST00000563028 WASLO00401 505 aaPredicted RBP33.81■■■■□ 3
KIFC3-213ENST00000563028 TRIM26Q12899 539 aaPredicted RBP33.81■■■■□ 3
KIFC3-213ENST00000563028 EIF3AQ14152 1382 aaKnown RBP33.81■■■■□ 3
KIFC3-213ENST00000563028 NGLY1Q96IV0 654 aa33.8■■■■□ 3
KIFC3-213ENST00000563028 SPATA31A3Q5VYP0 1347 aa33.79■■■■□ 3
KIFC3-213ENST00000563028 PMFBP1Q8TBY8 1022 aa33.79■■■■□ 3
KIFC3-213ENST00000563028 PSME1Q06323 249 aa33.78■■■■□ 3
KIFC3-213ENST00000563028 PRR36Q9H6K5 1346 aa33.77■■■■□ 3
KIFC3-213ENST00000563028 TULP4Q9NRJ4 1543 aa33.76■■■■□ 3
KIFC3-213ENST00000563028 RXRBP28702 533 aa33.76■■■□□ 2.99
KIFC3-213ENST00000563028 QTRT2Q9H974 415 aaKnown RBP33.71■■■□□ 2.99
KIFC3-213ENST00000563028 SBNO1A3KN83 1393 aa33.71■■■□□ 2.99
KIFC3-213ENST00000563028 TNS3Q68CZ2 1445 aa33.7■■■□□ 2.99
KIFC3-213ENST00000563028 USP21Q9UK80 565 aa33.69■■■□□ 2.98
KIFC3-213ENST00000563028 FNBP4Q8N3X1 1017 aaPredicted RBP33.68■■■□□ 2.98
KIFC3-213ENST00000563028 CDK19Q9BWU1 502 aa33.67■■■□□ 2.98
KIFC3-213ENST00000563028 LMOD2Q6P5Q4 547 aa33.66■■■□□ 2.98
KIFC3-213ENST00000563028 NUDT16Q96DE0 195 aaKnown RBP33.66■■■□□ 2.98
KIFC3-213ENST00000563028 GPRASP1Q5JY77 1395 aa33.65■■■□□ 2.98
KIFC3-213ENST00000563028 RBM6P78332 1123 aaKnown RBP33.64■■■□□ 2.98
KIFC3-213ENST00000563028 NGDNQ8NEJ9 315 aaKnown RBP33.64■■■□□ 2.98
KIFC3-213ENST00000563028 ATP7BP35670 1465 aa33.63■■■□□ 2.97
KIFC3-213ENST00000563028 MARF1Q9Y4F3 1742 aaKnown RBP33.62■■■□□ 2.97
KIFC3-213ENST00000563028 ARHGEF10O15013 1369 aa33.62■■■□□ 2.97
KIFC3-213ENST00000563028 CENPJQ9HC77 1338 aaPredicted RBP33.62■■■□□ 2.97
KIFC3-213ENST00000563028 PLEKHG5O94827 1062 aa33.62■■■□□ 2.97
KIFC3-213ENST00000563028 CDK12Q9NYV4 1490 aaPredicted RBP33.62■■■□□ 2.97
KIFC3-213ENST00000563028 HAP1P54257 671 aaPredicted RBP33.61■■■□□ 2.97
KIFC3-213ENST00000563028 CABLES1Q8TDN4 633 aa33.61■■■□□ 2.97
KIFC3-213ENST00000563028 TRPM1Q7Z4N2 1603 aa33.61■■■□□ 2.97
KIFC3-213ENST00000563028 TRPC5Q9UL62 973 aaPredicted RBP33.6■■■□□ 2.97
KIFC3-213ENST00000563028 ITSN1Q15811 1721 aa33.58■■■□□ 2.97
KIFC3-213ENST00000563028 TRPM3Q9HCF6 1732 aaPredicted RBP33.57■■■□□ 2.96
KIFC3-213ENST00000563028 ROCK2O75116 1388 aaKnown RBP33.57■■■□□ 2.96
KIFC3-213ENST00000563028 CCDC61Q9Y6R9 512 aa33.55■■■□□ 2.96
KIFC3-213ENST00000563028 BCL9LQ86UU0 1499 aa33.55■■■□□ 2.96
KIFC3-213ENST00000563028 NBPF8Q3BBV2 869 aa33.54■■■□□ 2.96
KIFC3-213ENST00000563028 ATRNO75882 1429 aa33.53■■■□□ 2.96
KIFC3-213ENST00000563028 RGS12O14924 1447 aa33.53■■■□□ 2.96
KIFC3-213ENST00000563028 PAK3O75914 559 aaPredicted RBP33.52■■■□□ 2.96
KIFC3-213ENST00000563028 SRPK2P78362 688 aaKnown RBP33.52■■■□□ 2.96
KIFC3-213ENST00000563028 QRICH2Q9H0J4 1663 aa33.52■■■□□ 2.96
KIFC3-213ENST00000563028 TONSLQ96HA7 1378 aa33.5■■■□□ 2.95
KIFC3-213ENST00000563028 ALS2Q96Q42 1657 aa33.5■■■□□ 2.95
KIFC3-213ENST00000563028 TOPAZ1Q8N9V7 1692 aa33.49■■■□□ 2.95
KIFC3-213ENST00000563028 ABCA3Q99758 1704 aa33.49■■■□□ 2.95
KIFC3-213ENST00000563028 ACEP12821 1306 aa33.49■■■□□ 2.95
KIFC3-213ENST00000563028 SLIT2O94813 1529 aa33.48■■■□□ 2.95
KIFC3-213ENST00000563028 PLEKHG3A1L390 1219 aa33.48■■■□□ 2.95
KIFC3-213ENST00000563028 CABP2Q9NPB3 220 aa33.48■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms