RNA–Protein interactions for RNA: ENST00000562879.5

RPL13-210, Transcript of ribosomal protein L13, humanhuman

TSL 1 (best)

Gene RPL13, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13-210ENST00000562879 ILDR2Q71H61 639 aa22.23■■□□□ 1.15
RPL13-210ENST00000562879 ADGRB2O60241 1585 aa22.23■■□□□ 1.15
RPL13-210ENST00000562879 PLEKHH1Q9ULM0 1364 aa22.23■■□□□ 1.15
RPL13-210ENST00000562879 DCAF11Q8TEB1 546 aa22.21■■□□□ 1.15
RPL13-210ENST00000562879 WAPLQ7Z5K2 1190 aa22.19■■□□□ 1.14
RPL13-210ENST00000562879 STK26Q9P289 416 aa22.19■■□□□ 1.14
RPL13-210ENST00000562879 SPATA31A6Q5VVP1 1343 aa22.19■■□□□ 1.14
RPL13-210ENST00000562879 ARHGEF28Q8N1W1 1705 aaKnown RBP22.17■■□□□ 1.14
RPL13-210ENST00000562879 LRP6O75581 1613 aa22.17■■□□□ 1.14
RPL13-210ENST00000562879 SOS2Q07890 1332 aaPredicted RBP22.15■■□□□ 1.14
RPL13-210ENST00000562879 KIF1AQ12756 1690 aa22.15■■□□□ 1.14
RPL13-210ENST00000562879 ORAI2Q96SN7 254 aa22.13■■□□□ 1.13
RPL13-210ENST00000562879 PXDNQ92626 1479 aa22.13■■□□□ 1.13
RPL13-210ENST00000562879 RGS17Q9UGC6 210 aaPredicted RBP22.12■■□□□ 1.13
RPL13-210ENST00000562879 KDM2AQ9Y2K7 1162 aa22.12■■□□□ 1.13
RPL13-210ENST00000562879 COL22A1Q8NFW1 1626 aaPredicted RBP22.12■■□□□ 1.13
RPL13-210ENST00000562879 PNPLA6Q8IY17 1366 aa22.12■■□□□ 1.13
RPL13-210ENST00000562879 TRIM26Q12899 539 aaPredicted RBP22.11■■□□□ 1.13
RPL13-210ENST00000562879 LRRC59Q96AG4 307 aaKnown RBP22.11■■□□□ 1.13
RPL13-210ENST00000562879 USP32Q8NFA0 1604 aa22.1■■□□□ 1.13
RPL13-210ENST00000562879 PRAM1Q96QH2 718 aa22.1■■□□□ 1.13
RPL13-210ENST00000562879 ANKARQ7Z5J8 1434 aa22.09■■□□□ 1.13
RPL13-210ENST00000562879 PHF23Q9BUL5 403 aaPredicted RBP22.09■■□□□ 1.13
RPL13-210ENST00000562879 DDX17Q92841 729 aaKnown RBP22.08■■□□□ 1.13
RPL13-210ENST00000562879 NPHP3Q7Z494 1330 aa22.07■■□□□ 1.12
RPL13-210ENST00000562879 RGPD8O14715 1765 aaPredicted RBP22.07■■□□□ 1.12
RPL13-210ENST00000562879 SOCS7O14512 581 aa22.05■■□□□ 1.12
RPL13-210ENST00000562879 TRPM1Q7Z4N2 1603 aa22.05■■□□□ 1.12
RPL13-210ENST00000562879 TULP4Q9NRJ4 1543 aa22.05■■□□□ 1.12
RPL13-210ENST00000562879 TRAK1Q9UPV9 953 aa22.04■■□□□ 1.12
RPL13-210ENST00000562879 ESCO1Q5FWF5 840 aa22.03■■□□□ 1.12
RPL13-210ENST00000562879 L3MBTL2Q969R5 705 aa22.03■■□□□ 1.12
RPL13-210ENST00000562879 EIF3AQ14152 1382 aaKnown RBP22.02■■□□□ 1.12
RPL13-210ENST00000562879 POGKQ9P215 609 aa22.01■■□□□ 1.11
RPL13-210ENST00000562879 SIN3AQ96ST3 1273 aa22■■□□□ 1.11
RPL13-210ENST00000562879 ITSN1Q15811 1721 aa21.98■■□□□ 1.11
RPL13-210ENST00000562879 FOXO3O43524 673 aa21.98■■□□□ 1.11
RPL13-210ENST00000562879 SAFB2Q14151 953 aaKnown RBP eCLIP21.98■■□□□ 1.11
RPL13-210ENST00000562879 ATP7BP35670 1465 aa21.97■■□□□ 1.11
RPL13-210ENST00000562879 TOPAZ1Q8N9V7 1692 aa21.97■■□□□ 1.11
RPL13-210ENST00000562879 NUTM2FA1L443 756 aa21.96■■□□□ 1.11
RPL13-210ENST00000562879 WASLO00401 505 aaPredicted RBP21.96■■□□□ 1.11
RPL13-210ENST00000562879 NBPF1Q3BBV0 1214 aa21.96■■□□□ 1.11
RPL13-210ENST00000562879 POTEAQ6S8J7 498 aa21.96■■□□□ 1.11
RPL13-210ENST00000562879 TRPM3Q9HCF6 1732 aaPredicted RBP21.96■■□□□ 1.11
RPL13-210ENST00000562879 MARF1Q9Y4F3 1742 aaKnown RBP21.95■■□□□ 1.1
RPL13-210ENST00000562879 PHF8Q9UPP1 1060 aa21.95■■□□□ 1.1
RPL13-210ENST00000562879 MINK1Q8N4C8 1332 aaPredicted RBP21.94■■□□□ 1.1
RPL13-210ENST00000562879 PRR36Q9H6K5 1346 aa21.94■■□□□ 1.1
RPL13-210ENST00000562879 SBNO1A3KN83 1393 aa21.93■■□□□ 1.1
RPL13-210ENST00000562879 GPRASP1Q5JY77 1395 aa21.93■■□□□ 1.1
RPL13-210ENST00000562879 SPATA31A3Q5VYP0 1347 aa21.93■■□□□ 1.1
RPL13-210ENST00000562879 TNS3Q68CZ2 1445 aa21.93■■□□□ 1.1
RPL13-210ENST00000562879 QRICH2Q9H0J4 1663 aa21.92■■□□□ 1.1
RPL13-210ENST00000562879 HIRIP3Q9BW71 556 aaPredicted RBP21.92■■□□□ 1.1
RPL13-210ENST00000562879 ALS2Q96Q42 1657 aa21.91■■□□□ 1.1
RPL13-210ENST00000562879 ZNF772Q68DY9 489 aaPredicted RBP21.91■■□□□ 1.1
RPL13-210ENST00000562879 ABCA3Q99758 1704 aa21.91■■□□□ 1.1
RPL13-210ENST00000562879 MEX3CQ5U5Q3 659 aaKnown RBP21.9■■□□□ 1.1
RPL13-210ENST00000562879 NUTM2BA6NNL0 878 aaPredicted RBP21.88■■□□□ 1.09
RPL13-210ENST00000562879 NUTM2EB1AL46 878 aaPredicted RBP21.88■■□□□ 1.09
RPL13-210ENST00000562879 XPCQ01831 940 aaPredicted RBP21.88■■□□□ 1.09
RPL13-210ENST00000562879 NEUROD1Q13562 356 aa21.88■■□□□ 1.09
RPL13-210ENST00000562879 KRT28Q7Z3Y7 464 aa21.88■■□□□ 1.09
RPL13-210ENST00000562879 NUTM2AQ8IVF1 878 aaPredicted RBP21.88■■□□□ 1.09
RPL13-210ENST00000562879 CDK12Q9NYV4 1490 aaPredicted RBP21.88■■□□□ 1.09
RPL13-210ENST00000562879 RALGAPBQ86X10 1494 aa21.87■■□□□ 1.09
RPL13-210ENST00000562879 AFF2P51816 1311 aa21.86■■□□□ 1.09
RPL13-210ENST00000562879 CENPJQ9HC77 1338 aaPredicted RBP21.86■■□□□ 1.09
RPL13-210ENST00000562879 CRYBG1Q9Y4K1 1723 aa21.86■■□□□ 1.09
RPL13-210ENST00000562879 POLR3AO14802 1390 aaPredicted RBP21.86■■□□□ 1.09
RPL13-210ENST00000562879 ARHGEF10O15013 1369 aa21.86■■□□□ 1.09
RPL13-210ENST00000562879 PSME1Q06323 249 aa21.85■■□□□ 1.09
RPL13-210ENST00000562879 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.85■■□□□ 1.09
RPL13-210ENST00000562879 ROCK2O75116 1388 aaKnown RBP21.85■■□□□ 1.09
RPL13-210ENST00000562879 FNBP4Q8N3X1 1017 aaPredicted RBP21.84■■□□□ 1.09
RPL13-210ENST00000562879 NBPF8Q3BBV2 869 aa21.83■■□□□ 1.09
RPL13-210ENST00000562879 TONSLQ96HA7 1378 aa21.83■■□□□ 1.08
RPL13-210ENST00000562879 SBNO2Q9Y2G9 1366 aa21.83■■□□□ 1.08
RPL13-210ENST00000562879 NUDT16Q96DE0 195 aaKnown RBP21.82■■□□□ 1.08
RPL13-210ENST00000562879 C8orf37Q96NL8 207 aa21.82■■□□□ 1.08
RPL13-210ENST00000562879 CDK19Q9BWU1 502 aa21.82■■□□□ 1.08
RPL13-210ENST00000562879 PMFBP1Q8TBY8 1022 aa21.81■■□□□ 1.08
RPL13-210ENST00000562879 BCL9LQ86UU0 1499 aa21.79■■□□□ 1.08
RPL13-210ENST00000562879 ADAMTS2O95450 1211 aa21.79■■□□□ 1.08
RPL13-210ENST00000562879 CCDC61Q9Y6R9 512 aa21.79■■□□□ 1.08
RPL13-210ENST00000562879 SLIT2O94813 1529 aa21.79■■□□□ 1.08
RPL13-210ENST00000562879 PLEKHG3A1L390 1219 aa21.78■■□□□ 1.08
RPL13-210ENST00000562879 CLSPNQ9HAW4 1339 aa21.78■■□□□ 1.08
RPL13-210ENST00000562879 NWD2Q9ULI1 1742 aa21.77■■□□□ 1.08
RPL13-210ENST00000562879 ATRNO75882 1429 aa21.77■■□□□ 1.08
RPL13-210ENST00000562879 NGLY1Q96IV0 654 aa21.76■■□□□ 1.07
RPL13-210ENST00000562879 PLCH1Q4KWH8 1693 aa21.75■■□□□ 1.07
RPL13-210ENST00000562879 RXRBP28702 533 aa21.74■■□□□ 1.07
RPL13-210ENST00000562879 BRD4O60885 1362 aaPredicted RBP21.74■■□□□ 1.07
RPL13-210ENST00000562879 PPIP5K1Q6PFW1 1433 aa21.73■■□□□ 1.07
RPL13-210ENST00000562879 NGDNQ8NEJ9 315 aaKnown RBP21.73■■□□□ 1.07
RPL13-210ENST00000562879 PHRF1Q9P1Y6 1649 aaKnown RBP21.73■■□□□ 1.07
RPL13-210ENST00000562879 QTRT2Q9H974 415 aaKnown RBP21.72■■□□□ 1.07
RPL13-210ENST00000562879 USP21Q9UK80 565 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms