RNA–Protein interactions for RNA: ENST00000562875.5

KARS-203, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 3

Gene KARS, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-203ENST00000562875 NECTIN2Q92692 538 aa11.81□□□□□ -0.52
KARS-203ENST00000562875 PCDH10Q9P2E7 1040 aa11.81□□□□□ -0.52
KARS-203ENST00000562875 ATP1B4Q9UN42 357 aaPredicted RBP11.81□□□□□ -0.52
KARS-203ENST00000562875 HPS5Q9UPZ3 1129 aa11.81□□□□□ -0.52
KARS-203ENST00000562875 PPP4CP60510 307 aa11.8□□□□□ -0.52
KARS-203ENST00000562875 KCTD12Q96CX2 325 aaKnown RBP11.8□□□□□ -0.52
KARS-203ENST00000562875 NCAPD3P42695 1498 aa11.79□□□□□ -0.52
KARS-203ENST00000562875 CLK2P49760 499 aaKnown RBP11.79□□□□□ -0.52
KARS-203ENST00000562875 KMT5BQ4FZB7 885 aa11.79□□□□□ -0.52
KARS-203ENST00000562875 TSR3Q9UJK0 312 aaKnown RBP11.79□□□□□ -0.52
KARS-203ENST00000562875 TTBK1Q5TCY1 1321 aaPredicted RBP11.79□□□□□ -0.52
KARS-203ENST00000562875 USP46P62068 366 aa11.78□□□□□ -0.52
KARS-203ENST00000562875 RAPGEF2Q9Y4G8 1499 aa11.77□□□□□ -0.52
KARS-203ENST00000562875 MOXD2PA6NHM9 499 aa11.77□□□□□ -0.53
KARS-203ENST00000562875 DIEXFQ68CQ4 756 aaKnown RBP11.77□□□□□ -0.53
KARS-203ENST00000562875 THSD4Q6ZMP0 1018 aa11.77□□□□□ -0.53
KARS-203ENST00000562875 RIC3Q7Z5B4 369 aa11.77□□□□□ -0.53
KARS-203ENST00000562875 PROCA1Q8NCQ7 364 aaPredicted RBP11.77□□□□□ -0.53
KARS-203ENST00000562875 HOXA2O43364 376 aa11.76□□□□□ -0.53
KARS-203ENST00000562875 NDUFV2P19404 249 aa11.76□□□□□ -0.53
KARS-203ENST00000562875 FUT2Q10981 343 aa11.76□□□□□ -0.53
KARS-203ENST00000562875 LIMD1Q9UGP4 676 aa11.76□□□□□ -0.53
KARS-203ENST00000562875 RSBN1LQ6PCB5 846 aaPredicted RBP11.75□□□□□ -0.53
KARS-203ENST00000562875 KIF27Q86VH2 1401 aa11.75□□□□□ -0.53
KARS-203ENST00000562875 SPTLC1O15269 473 aa11.74□□□□□ -0.53
KARS-203ENST00000562875 PRR14Q9BWN1 585 aa11.74□□□□□ -0.53
KARS-203ENST00000562875 WBP1LQ9NX94 342 aa11.74□□□□□ -0.53
KARS-203ENST00000562875 ACTN4O43707 911 aaKnown RBP11.73□□□□□ -0.53
KARS-203ENST00000562875 GRIPAP1Q4V328 841 aa11.73□□□□□ -0.53
KARS-203ENST00000562875 ATP6V1AP38606 617 aa11.72□□□□□ -0.53
KARS-203ENST00000562875 APLP1P51693 650 aa11.72□□□□□ -0.53
KARS-203ENST00000562875 CSPP1Q1MSJ5 1256 aa11.72□□□□□ -0.53
KARS-203ENST00000562875 HLA-CQ95604 372 aa11.72□□□□□ -0.53
KARS-203ENST00000562875 MYT1LQ9UL68 1186 aa11.72□□□□□ -0.53
KARS-203ENST00000562875 CUX1P39880 1505 aa11.71□□□□□ -0.53
KARS-203ENST00000562875 PRXQ9BXM0 1461 aa11.71□□□□□ -0.53
KARS-203ENST00000562875 FDX1P10109 184 aa11.71□□□□□ -0.53
KARS-203ENST00000562875 GUCA2AQ02747 115 aa11.71□□□□□ -0.53
KARS-203ENST00000562875 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.71□□□□□ -0.53
KARS-203ENST00000562875 GJA5P36382 358 aa11.7□□□□□ -0.54
KARS-203ENST00000562875 CFTRP13569 1480 aa11.7□□□□□ -0.54
KARS-203ENST00000562875 PTPN5P54829 565 aa11.69□□□□□ -0.54
KARS-203ENST00000562875 TUSC1Q2TAM9 212 aa11.69□□□□□ -0.54
KARS-203ENST00000562875 PUS10Q3MIT2 529 aaKnown RBP11.69□□□□□ -0.54
KARS-203ENST00000562875 PCDHB15Q9Y5E8 787 aa11.69□□□□□ -0.54
KARS-203ENST00000562875 ACIN1Q9UKV3 1341 aaKnown RBP11.68□□□□□ -0.54
KARS-203ENST00000562875 CLSPNQ9HAW4 1339 aa11.67□□□□□ -0.54
KARS-203ENST00000562875 PCDHGC3Q9UN70 934 aa11.67□□□□□ -0.54
KARS-203ENST00000562875 PCDHB3Q9Y5E6 796 aa11.67□□□□□ -0.54
KARS-203ENST00000562875 ARAP1Q96P48 1450 aa11.66□□□□□ -0.54
KARS-203ENST00000562875 MORN1Q5T089 497 aa11.66□□□□□ -0.54
KARS-203ENST00000562875 QPCTQ16769 361 aa11.65□□□□□ -0.54
KARS-203ENST00000562875 SPNS2Q8IVW8 549 aa11.65□□□□□ -0.54
KARS-203ENST00000562875 CABLES1Q8TDN4 633 aa11.64□□□□□ -0.55
KARS-203ENST00000562875 SLC27A5Q9Y2P5 690 aa11.64□□□□□ -0.55
KARS-203ENST00000562875 NUTM2BA6NNL0 878 aaPredicted RBP11.63□□□□□ -0.55
KARS-203ENST00000562875 NUTM2EB1AL46 878 aaPredicted RBP11.63□□□□□ -0.55
KARS-203ENST00000562875 LILRB3O75022 631 aa11.63□□□□□ -0.55
KARS-203ENST00000562875 NUTM2DQ5VT03 806 aaPredicted RBP11.63□□□□□ -0.55
KARS-203ENST00000562875 PRPF38BQ5VTL8 546 aaKnown RBP11.63□□□□□ -0.55
KARS-203ENST00000562875 FBXO31Q5XUX0 539 aaPredicted RBP11.63□□□□□ -0.55
KARS-203ENST00000562875 NYAP1Q6ZVC0 841 aa11.63□□□□□ -0.55
KARS-203ENST00000562875 NUTM2AQ8IVF1 878 aaPredicted RBP11.63□□□□□ -0.55
KARS-203ENST00000562875 ZBTB3Q9H5J0 574 aa11.63□□□□□ -0.55
KARS-203ENST00000562875 PPP2R2DQ66LE6 453 aa11.62□□□□□ -0.55
KARS-203ENST00000562875 C6orf229H3BNL8 230 aa11.61□□□□□ -0.55
KARS-203ENST00000562875 RFC5P40937 340 aa11.61□□□□□ -0.55
KARS-203ENST00000562875 MTMR2Q13614 643 aa11.61□□□□□ -0.55
KARS-203ENST00000562875 BLOC1S3Q6QNY0 202 aa11.61□□□□□ -0.55
KARS-203ENST00000562875 RNF166Q96A37 237 aaPredicted RBP11.61□□□□□ -0.55
KARS-203ENST00000562875 CFAP43Q8NDM7 1665 aa11.61□□□□□ -0.55
KARS-203ENST00000562875 CTTNBP2Q8WZ74 1663 aa11.61□□□□□ -0.55
KARS-203ENST00000562875 MAP3K1Q13233 1512 aa11.6□□□□□ -0.55
KARS-203ENST00000562875 Q3C1V9 767 aa11.6□□□□□ -0.55
KARS-203ENST00000562875 RTL5Q5HYW3 569 aaPredicted RBP11.6□□□□□ -0.55
KARS-203ENST00000562875 NR1I2O75469 434 aa11.59□□□□□ -0.55
KARS-203ENST00000562875 RANGAP1P46060 587 aaPredicted RBP11.59□□□□□ -0.55
KARS-203ENST00000562875 COPS2P61201 443 aa11.59□□□□□ -0.55
KARS-203ENST00000562875 SYMPKQ92797 1274 aaKnown RBP11.59□□□□□ -0.55
KARS-203ENST00000562875 CUL7Q14999 1698 aa11.59□□□□□ -0.55
KARS-203ENST00000562875 CC2D2AQ9P2K1 1620 aa11.58□□□□□ -0.56
KARS-203ENST00000562875 SCUBE3Q8IX30 993 aa11.58□□□□□ -0.56
KARS-203ENST00000562875 RRBP1Q9P2E9 1410 aaKnown RBP11.57□□□□□ -0.56
KARS-203ENST00000562875 TIAM1Q13009 1591 aa11.57□□□□□ -0.56
KARS-203ENST00000562875 SPDYE5A6NIY4 337 aa11.56□□□□□ -0.56
KARS-203ENST00000562875 RNF19BQ6ZMZ0 732 aa11.56□□□□□ -0.56
KARS-203ENST00000562875 CUX2O14529 1486 aa11.56□□□□□ -0.56
KARS-203ENST00000562875 TMEM259Q4ZIN3 620 aa11.55□□□□□ -0.56
KARS-203ENST00000562875 HCSTQ9UBK5 93 aa11.55□□□□□ -0.56
KARS-203ENST00000562875 ARHGAP35Q9NRY4 1499 aa11.55□□□□□ -0.56
KARS-203ENST00000562875 DNMBPQ6XZF7 1577 aa11.54□□□□□ -0.56
KARS-203ENST00000562875 FHAD1B1AJZ9 1412 aa11.54□□□□□ -0.56
KARS-203ENST00000562875 BRICD5Q6PL45 260 aa11.54□□□□□ -0.56
KARS-203ENST00000562875 C14orf37Q86TY3 774 aa11.54□□□□□ -0.56
KARS-203ENST00000562875 MTRQ99707 1265 aa11.54□□□□□ -0.56
KARS-203ENST00000562875 SALL2Q9Y467 1007 aaPredicted RBP11.54□□□□□ -0.56
KARS-203ENST00000562875 CADPSQ9ULU8 1353 aa11.54□□□□□ -0.56
KARS-203ENST00000562875 FGD5Q6ZNL6 1462 aa11.53□□□□□ -0.56
KARS-203ENST00000562875 AP1G2O75843 785 aa11.53□□□□□ -0.56
KARS-203ENST00000562875 FMNL1O95466 1100 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms