RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 ZRSR2Q15696 482 aaKnown RBP11.56□□□□□ -0.56
CDH1-205ENST00000562836 PNISRQ8TF01 805 aaKnown RBP11.56□□□□□ -0.56
CDH1-205ENST00000562836 MTA3Q9BTC8 594 aa11.56□□□□□ -0.56
CDH1-205ENST00000562836 MSNP26038 577 aaKnown RBP11.56□□□□□ -0.56
CDH1-205ENST00000562836 TESPA1A2RU30 521 aaPredicted RBP11.55□□□□□ -0.56
CDH1-205ENST00000562836 CAND2O75155 1236 aa11.55□□□□□ -0.56
CDH1-205ENST00000562836 CAPN15O75808 1086 aa11.55□□□□□ -0.56
CDH1-205ENST00000562836 IPO7O95373 1038 aaKnown RBP11.55□□□□□ -0.56
CDH1-205ENST00000562836 HNRNPUQ00839 825 aaKnown RBP eCLIP11.55□□□□□ -0.56
CDH1-205ENST00000562836 SETDB1Q15047 1291 aa11.55□□□□□ -0.56
CDH1-205ENST00000562836 ZSCAN30Q86W11 494 aa11.55□□□□□ -0.56
CDH1-205ENST00000562836 FAM210AQ96ND0 272 aa11.55□□□□□ -0.56
CDH1-205ENST00000562836 CXorf56Q9H5V9 222 aa11.55□□□□□ -0.56
CDH1-205ENST00000562836 MED4Q9NPJ6 270 aa11.55□□□□□ -0.56
CDH1-205ENST00000562836 TPM3P06753 285 aa11.55□□□□□ -0.56
CDH1-205ENST00000562836 SMARCA5O60264 1052 aaPredicted RBP11.54□□□□□ -0.56
CDH1-205ENST00000562836 CCDC181Q5TID7 509 aa11.54□□□□□ -0.56
CDH1-205ENST00000562836 PRPF38AQ8NAV1 312 aaKnown RBP11.54□□□□□ -0.56
CDH1-205ENST00000562836 CCDC88BA6NC98 1476 aa11.53□□□□□ -0.56
CDH1-205ENST00000562836 CCDC184Q52MB2 194 aa11.53□□□□□ -0.56
CDH1-205ENST00000562836 MNS1Q8NEH6 495 aa11.53□□□□□ -0.56
CDH1-205ENST00000562836 BRMS1Q9HCU9 246 aa11.53□□□□□ -0.56
CDH1-205ENST00000562836 NUCKS1Q9H1E3 243 aaKnown RBP11.53□□□□□ -0.56
CDH1-205ENST00000562836 ANAPC4Q9UJX5 808 aa11.53□□□□□ -0.56
CDH1-205ENST00000562836 CALRP27797 417 aaKnown RBP11.52□□□□□ -0.56
CDH1-205ENST00000562836 MORC1Q86VD1 984 aa11.52□□□□□ -0.56
CDH1-205ENST00000562836 GRPEL1Q9HAV7 217 aa11.52□□□□□ -0.56
CDH1-205ENST00000562836 ECEL1O95672 775 aa11.52□□□□□ -0.57
CDH1-205ENST00000562836 CTR9Q6PD62 1173 aa11.52□□□□□ -0.57
CDH1-205ENST00000562836 ZNF710Q8N1W2 664 aa11.52□□□□□ -0.57
CDH1-205ENST00000562836 JMYQ8N9B5 988 aa11.52□□□□□ -0.57
CDH1-205ENST00000562836 JARID2Q92833 1246 aaPredicted RBP11.52□□□□□ -0.57
CDH1-205ENST00000562836 MAF1Q9H063 256 aa11.52□□□□□ -0.57
CDH1-205ENST00000562836 IGF1RP08069 1367 aa11.52□□□□□ -0.57
CDH1-205ENST00000562836 H0YHG0 523 aa11.51□□□□□ -0.57
CDH1-205ENST00000562836 CTAGE5O15320 804 aa11.51□□□□□ -0.57
CDH1-205ENST00000562836 NAT1P18440 290 aa11.51□□□□□ -0.57
CDH1-205ENST00000562836 NAP1L1P55209 391 aaKnown RBP11.51□□□□□ -0.57
CDH1-205ENST00000562836 SARNPP82979 210 aaKnown RBP11.51□□□□□ -0.57
CDH1-205ENST00000562836 IRAK4Q9NWZ3 460 aa11.51□□□□□ -0.57
CDH1-205ENST00000562836 TOP2AP11388 1531 aaKnown RBP11.51□□□□□ -0.57
CDH1-205ENST00000562836 EPB41L2O43491 1005 aaKnown RBP11.51□□□□□ -0.57
CDH1-205ENST00000562836 GYS2P54840 703 aa11.51□□□□□ -0.57
CDH1-205ENST00000562836 SRPK2P78362 688 aaKnown RBP11.51□□□□□ -0.57
CDH1-205ENST00000562836 TSC1Q92574 1164 aa11.51□□□□□ -0.57
CDH1-205ENST00000562836 DDX49Q9Y6V7 483 aaKnown RBP11.51□□□□□ -0.57
CDH1-205ENST00000562836 ERICH4A6NGS2 130 aa11.5□□□□□ -0.57
CDH1-205ENST00000562836 SLFN14P0C7P3 912 aa11.5□□□□□ -0.57
CDH1-205ENST00000562836 CSPP1Q1MSJ5 1256 aa11.5□□□□□ -0.57
CDH1-205ENST00000562836 SASS6Q6UVJ0 657 aa11.5□□□□□ -0.57
CDH1-205ENST00000562836 SUDS3Q9H7L9 328 aaPredicted RBP11.5□□□□□ -0.57
CDH1-205ENST00000562836 RBM27Q9P2N5 1060 aaKnown RBP11.5□□□□□ -0.57
CDH1-205ENST00000562836 RPAINQ86UA6 219 aa11.5□□□□□ -0.57
CDH1-205ENST00000562836 DRC1Q96MC2 740 aa11.5□□□□□ -0.57
CDH1-205ENST00000562836 ABCC8Q09428 1581 aa11.5□□□□□ -0.57
CDH1-205ENST00000562836 PES1O00541 588 aaKnown RBP11.5□□□□□ -0.57
CDH1-205ENST00000562836 ANP32CO43423 234 aa11.5□□□□□ -0.57
CDH1-205ENST00000562836 XPCQ01831 940 aaPredicted RBP11.5□□□□□ -0.57
CDH1-205ENST00000562836 SART3Q15020 963 aaKnown RBP11.5□□□□□ -0.57
CDH1-205ENST00000562836 CCDC125Q86Z20 511 aa11.5□□□□□ -0.57
CDH1-205ENST00000562836 UPF2Q9HAU5 1272 aaKnown RBP11.5□□□□□ -0.57
CDH1-205ENST00000562836 NUB1Q9Y5A7 615 aa11.5□□□□□ -0.57
CDH1-205ENST00000562836 SKILP12757 684 aa11.49□□□□□ -0.57
CDH1-205ENST00000562836 UVSSAQ2YD98 709 aa11.49□□□□□ -0.57
CDH1-205ENST00000562836 MKL1Q969V6 931 aa11.49□□□□□ -0.57
CDH1-205ENST00000562836 KIF4AO95239 1232 aa11.49□□□□□ -0.57
CDH1-205ENST00000562836 ABCD1P33897 745 aa11.49□□□□□ -0.57
CDH1-205ENST00000562836 C11orf91Q3C1V1 193 aa11.49□□□□□ -0.57
CDH1-205ENST00000562836 BIN2Q9UBW5 565 aaPredicted RBP11.49□□□□□ -0.57
CDH1-205ENST00000562836 GABPB1Q06547 395 aaPredicted RBP11.48□□□□□ -0.57
CDH1-205ENST00000562836 DDX10Q13206 875 aaKnown RBP11.48□□□□□ -0.57
CDH1-205ENST00000562836 ZKSCAN2Q63HK3 967 aa11.48□□□□□ -0.57
CDH1-205ENST00000562836 INHBEP58166 350 aa11.48□□□□□ -0.57
CDH1-205ENST00000562836 FAM161AQ3B820 660 aa11.48□□□□□ -0.57
CDH1-205ENST00000562836 HDGFL1Q5TGJ6 251 aa11.48□□□□□ -0.57
CDH1-205ENST00000562836 FAM184AQ8NB25 1140 aa11.48□□□□□ -0.57
CDH1-205ENST00000562836 RASSF4Q9H2L5 321 aa11.48□□□□□ -0.57
CDH1-205ENST00000562836 MARCH6O60337 910 aa11.47□□□□□ -0.57
CDH1-205ENST00000562836 LIG1P18858 919 aa11.47□□□□□ -0.57
CDH1-205ENST00000562836 PANK3Q9H999 370 aa11.47□□□□□ -0.57
CDH1-205ENST00000562836 ZNF232Q9UNY5 417 aa11.47□□□□□ -0.57
CDH1-205ENST00000562836 FAM163BP0C2L3 166 aa11.47□□□□□ -0.57
CDH1-205ENST00000562836 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.47□□□□□ -0.57
CDH1-205ENST00000562836 ZCRB1Q8TBF4 217 aaKnown RBP11.47□□□□□ -0.57
CDH1-205ENST00000562836 SOGA1O94964 1423 aa11.47□□□□□ -0.57
CDH1-205ENST00000562836 NEXNQ0ZGT2 675 aa11.46□□□□□ -0.57
CDH1-205ENST00000562836 MAP9Q49MG5 647 aa11.46□□□□□ -0.57
CDH1-205ENST00000562836 GPBP1L1Q9HC44 474 aaPredicted RBP11.46□□□□□ -0.57
CDH1-205ENST00000562836 U2AF2P26368 475 aaKnown RBP eCLIP11.46□□□□□ -0.58
CDH1-205ENST00000562836 SWT1Q5T5J6 900 aaKnown RBP11.46□□□□□ -0.58
CDH1-205ENST00000562836 GOLGA3Q08378 1498 aa11.46□□□□□ -0.58
CDH1-205ENST00000562836 PEX14O75381 377 aa11.45□□□□□ -0.58
CDH1-205ENST00000562836 KRBA2Q6ZNG9 492 aa11.45□□□□□ -0.58
CDH1-205ENST00000562836 PABPN1Q86U42 306 aaKnown RBP eCLIP11.45□□□□□ -0.58
CDH1-205ENST00000562836 HIRIP3Q9BW71 556 aaPredicted RBP11.45□□□□□ -0.58
CDH1-205ENST00000562836 KIF3CO14782 793 aa11.45□□□□□ -0.58
CDH1-205ENST00000562836 RAD51AP2Q09MP3 1159 aa11.45□□□□□ -0.58
CDH1-205ENST00000562836 PPME1Q9Y570 386 aa11.45□□□□□ -0.58
CDH1-205ENST00000562836 SMARCA2P51531 1590 aa11.45□□□□□ -0.58
CDH1-205ENST00000562836 TTC19Q6DKK2 380 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms