RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 FBXO41Q8TF61 875 aa31.79■■■□□ 2.68
SYNGR3-202ENST00000562045 GPRASP1Q5JY77 1395 aa31.79■■■□□ 2.68
SYNGR3-202ENST00000562045 TOM1O60784 492 aa31.77■■■□□ 2.68
SYNGR3-202ENST00000562045 POGKQ9P215 609 aa31.76■■■□□ 2.67
SYNGR3-202ENST00000562045 PIP4K2BP78356 416 aa31.75■■■□□ 2.67
SYNGR3-202ENST00000562045 DCCP43146 1447 aa31.73■■■□□ 2.67
SYNGR3-202ENST00000562045 CDC42BPGQ6DT37 1551 aa31.72■■■□□ 2.67
SYNGR3-202ENST00000562045 ATF3P18847 181 aa31.72■■■□□ 2.67
SYNGR3-202ENST00000562045 CARD11Q9BXL7 1154 aa31.72■■■□□ 2.67
SYNGR3-202ENST00000562045 CADPS2Q86UW7 1296 aa31.7■■■□□ 2.67
SYNGR3-202ENST00000562045 HIRIP3Q9BW71 556 aaPredicted RBP31.7■■■□□ 2.67
SYNGR3-202ENST00000562045 MINK1Q8N4C8 1332 aaPredicted RBP31.7■■■□□ 2.67
SYNGR3-202ENST00000562045 SLAIN2Q9P270 581 aa31.69■■■□□ 2.66
SYNGR3-202ENST00000562045 SCAF1Q9H7N4 1312 aaKnown RBP31.69■■■□□ 2.66
SYNGR3-202ENST00000562045 MST1RQ04912 1400 aa31.69■■■□□ 2.66
SYNGR3-202ENST00000562045 QRICH2Q9H0J4 1663 aa31.68■■■□□ 2.66
SYNGR3-202ENST00000562045 ILDR1Q86SU0 546 aaPredicted RBP31.68■■■□□ 2.66
SYNGR3-202ENST00000562045 ZNF316A6NFI3 1004 aaPredicted RBP31.67■■■□□ 2.66
SYNGR3-202ENST00000562045 ADGRB2O60241 1585 aa31.66■■■□□ 2.66
SYNGR3-202ENST00000562045 FMN2Q9NZ56 1722 aa31.66■■■□□ 2.66
SYNGR3-202ENST00000562045 ROBO1Q9Y6N7 1651 aa31.66■■■□□ 2.66
SYNGR3-202ENST00000562045 CENPJQ9HC77 1338 aaPredicted RBP31.64■■■□□ 2.65
SYNGR3-202ENST00000562045 NUTM2FA1L443 756 aa31.63■■■□□ 2.65
SYNGR3-202ENST00000562045 RGPD8O14715 1765 aaPredicted RBP31.62■■■□□ 2.65
SYNGR3-202ENST00000562045 C1orf167Q5SNV9 1468 aa31.61■■■□□ 2.65
SYNGR3-202ENST00000562045 USP32Q8NFA0 1604 aa31.58■■■□□ 2.65
SYNGR3-202ENST00000562045 EIF3AQ14152 1382 aaKnown RBP31.55■■■□□ 2.64
SYNGR3-202ENST00000562045 EIF4G2P78344 907 aaKnown RBP eCLIP31.55■■■□□ 2.64
SYNGR3-202ENST00000562045 BRINP3Q76B58 766 aa31.55■■■□□ 2.64
SYNGR3-202ENST00000562045 ORAI2Q96SN7 254 aa31.55■■■□□ 2.64
SYNGR3-202ENST00000562045 WASLO00401 505 aaPredicted RBP31.55■■■□□ 2.64
SYNGR3-202ENST00000562045 TULP4Q9NRJ4 1543 aa31.53■■■□□ 2.64
SYNGR3-202ENST00000562045 USP47Q96K76 1375 aa31.52■■■□□ 2.64
SYNGR3-202ENST00000562045 PRR36Q9H6K5 1346 aa31.51■■■□□ 2.63
SYNGR3-202ENST00000562045 ST20-MTHFSA0A0A6YYL1 179 aa31.5■■■□□ 2.63
SYNGR3-202ENST00000562045 HSPA1LP34931 641 aa31.49■■■□□ 2.63
SYNGR3-202ENST00000562045 CDK19Q9BWU1 502 aa31.49■■■□□ 2.63
SYNGR3-202ENST00000562045 DDX17Q92841 729 aaKnown RBP31.49■■■□□ 2.63
SYNGR3-202ENST00000562045 HSPA5P11021 654 aaKnown RBP31.48■■■□□ 2.63
SYNGR3-202ENST00000562045 ESCO1Q5FWF5 840 aa31.47■■■□□ 2.63
SYNGR3-202ENST00000562045 ATP7BP35670 1465 aa31.45■■■□□ 2.63
SYNGR3-202ENST00000562045 TESK2Q96S53 571 aa31.45■■■□□ 2.63
SYNGR3-202ENST00000562045 NHSL1Q5SYE7 1610 aa31.45■■■□□ 2.63
SYNGR3-202ENST00000562045 PHLPP1O60346 1717 aa31.45■■■□□ 2.62
SYNGR3-202ENST00000562045 ANKARQ7Z5J8 1434 aa31.44■■■□□ 2.62
SYNGR3-202ENST00000562045 SBNO2Q9Y2G9 1366 aa31.44■■■□□ 2.62
SYNGR3-202ENST00000562045 CABP2Q9NPB3 220 aa31.44■■■□□ 2.62
SYNGR3-202ENST00000562045 AHDC1Q5TGY3 1603 aaPredicted RBP31.42■■■□□ 2.62
SYNGR3-202ENST00000562045 TOPAZ1Q8N9V7 1692 aa31.41■■■□□ 2.62
SYNGR3-202ENST00000562045 NUDT16Q96DE0 195 aaKnown RBP31.4■■■□□ 2.62
SYNGR3-202ENST00000562045 COL16A1Q07092 1604 aaPredicted RBP31.39■■■□□ 2.62
SYNGR3-202ENST00000562045 SRPK2P78362 688 aaKnown RBP31.39■■■□□ 2.62
SYNGR3-202ENST00000562045 EVC2Q86UK5 1308 aa31.38■■■□□ 2.61
SYNGR3-202ENST00000562045 KIF1AQ12756 1690 aa31.38■■■□□ 2.61
SYNGR3-202ENST00000562045 ITSN1Q15811 1721 aa31.37■■■□□ 2.61
SYNGR3-202ENST00000562045 PMFBP1Q8TBY8 1022 aa31.37■■■□□ 2.61
SYNGR3-202ENST00000562045 FOXO3O43524 673 aa31.36■■■□□ 2.61
SYNGR3-202ENST00000562045 PHF8Q9UPP1 1060 aa31.36■■■□□ 2.61
SYNGR3-202ENST00000562045 XPCQ01831 940 aaPredicted RBP31.33■■■□□ 2.61
SYNGR3-202ENST00000562045 DISP3Q9P2K9 1392 aa31.32■■■□□ 2.6
SYNGR3-202ENST00000562045 PXDNQ92626 1479 aa31.3■■■□□ 2.6
SYNGR3-202ENST00000562045 CCDC61Q9Y6R9 512 aa31.29■■■□□ 2.6
SYNGR3-202ENST00000562045 PPIP5K1Q6PFW1 1433 aa31.29■■■□□ 2.6
SYNGR3-202ENST00000562045 SOS2Q07890 1332 aaPredicted RBP31.27■■■□□ 2.6
SYNGR3-202ENST00000562045 NPHP3Q7Z494 1330 aa31.26■■■□□ 2.59
SYNGR3-202ENST00000562045 CABP1Q9NZU7 370 aa31.24■■■□□ 2.59
SYNGR3-202ENST00000562045 PLEKHG3A1L390 1219 aa31.23■■■□□ 2.59
SYNGR3-202ENST00000562045 ACEP12821 1306 aa31.22■■■□□ 2.59
SYNGR3-202ENST00000562045 KRT28Q7Z3Y7 464 aa31.21■■■□□ 2.59
SYNGR3-202ENST00000562045 TMF1P82094 1093 aa31.21■■■□□ 2.59
SYNGR3-202ENST00000562045 NGDNQ8NEJ9 315 aaKnown RBP31.21■■■□□ 2.59
SYNGR3-202ENST00000562045 TRPM3Q9HCF6 1732 aaPredicted RBP31.21■■■□□ 2.59
SYNGR3-202ENST00000562045 POLR3AO14802 1390 aaPredicted RBP31.21■■■□□ 2.59
SYNGR3-202ENST00000562045 ATAD2Q6PL18 1390 aa31.2■■■□□ 2.58
SYNGR3-202ENST00000562045 PSME1Q06323 249 aa31.19■■■□□ 2.58
SYNGR3-202ENST00000562045 DIEXFQ68CQ4 756 aaKnown RBP31.19■■■□□ 2.58
SYNGR3-202ENST00000562045 SHPRHQ149N8 1683 aa31.17■■■□□ 2.58
SYNGR3-202ENST00000562045 LRRC59Q96AG4 307 aaKnown RBP31.16■■■□□ 2.58
SYNGR3-202ENST00000562045 AKAP12Q02952 1782 aa31.15■■■□□ 2.58
SYNGR3-202ENST00000562045 C11orf95C9JLR9 678 aaPredicted RBP31.15■■■□□ 2.58
SYNGR3-202ENST00000562045 WASHC2AQ641Q2 1341 aa31.15■■■□□ 2.58
SYNGR3-202ENST00000562045 JCADQ9P266 1359 aa31.15■■■□□ 2.58
SYNGR3-202ENST00000562045 SLC12A5Q9H2X9 1139 aa31.15■■■□□ 2.58
SYNGR3-202ENST00000562045 CD163L1Q9NR16 1453 aa31.14■■■□□ 2.58
SYNGR3-202ENST00000562045 SLC24A1O60721 1099 aa31.14■■■□□ 2.58
SYNGR3-202ENST00000562045 PUS7Q96PZ0 661 aaKnown RBP31.14■■■□□ 2.58
SYNGR3-202ENST00000562045 PNPLA6Q8IY17 1366 aa31.14■■■□□ 2.58
SYNGR3-202ENST00000562045 CCDC7Q96M83 1385 aa31.13■■■□□ 2.57
SYNGR3-202ENST00000562045 TMC1Q8TDI8 760 aa31.12■■■□□ 2.57
SYNGR3-202ENST00000562045 MYOM1P52179 1685 aa31.12■■■□□ 2.57
SYNGR3-202ENST00000562045 SPATA31A3Q5VYP0 1347 aa31.12■■■□□ 2.57
SYNGR3-202ENST00000562045 ALS2Q96Q42 1657 aa31.11■■■□□ 2.57
SYNGR3-202ENST00000562045 KIF7Q2M1P5 1343 aa31.1■■■□□ 2.57
SYNGR3-202ENST00000562045 CPSF1Q10570 1443 aaKnown RBP31.1■■■□□ 2.57
SYNGR3-202ENST00000562045 TNS3Q68CZ2 1445 aa31.1■■■□□ 2.57
SYNGR3-202ENST00000562045 SBNO1A3KN83 1393 aa31.09■■■□□ 2.57
SYNGR3-202ENST00000562045 MON2Q7Z3U7 1717 aa31.07■■■□□ 2.57
SYNGR3-202ENST00000562045 COL22A1Q8NFW1 1626 aaPredicted RBP31.07■■■□□ 2.56
SYNGR3-202ENST00000562045 USP6P35125 1406 aa31.07■■■□□ 2.56
SYNGR3-202ENST00000562045 PAK3O75914 559 aaPredicted RBP31.06■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms