RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 SLC6A16Q9GZN6 736 aa5.82□□□□□ -1.48
CHD9-204ENST00000561869 HLA-CQ95604 372 aa5.81□□□□□ -1.48
CHD9-204ENST00000561869 POTECB2RU33 542 aa5.8□□□□□ -1.48
CHD9-204ENST00000561869 HOXA2O43364 376 aa5.8□□□□□ -1.48
CHD9-204ENST00000561869 USP46P62068 366 aa5.8□□□□□ -1.48
CHD9-204ENST00000561869 BRICD5Q6PL45 260 aa5.8□□□□□ -1.48
CHD9-204ENST00000561869 FAM160A2Q8N612 972 aaPredicted RBP5.8□□□□□ -1.48
CHD9-204ENST00000561869 SPIRE2Q8WWL2 714 aa5.8□□□□□ -1.48
CHD9-204ENST00000561869 SPSB2Q99619 263 aa5.8□□□□□ -1.48
CHD9-204ENST00000561869 SALL2Q9Y467 1007 aaPredicted RBP5.8□□□□□ -1.48
CHD9-204ENST00000561869 GRIPAP1Q4V328 841 aa5.79□□□□□ -1.48
CHD9-204ENST00000561869 RNF19BQ6ZMZ0 732 aa5.79□□□□□ -1.48
CHD9-204ENST00000561869 ZNF775Q96BV0 537 aaPredicted RBP5.79□□□□□ -1.48
CHD9-204ENST00000561869 BEGAINQ9BUH8 593 aa5.79□□□□□ -1.48
CHD9-204ENST00000561869 PKD2L1Q9P0L9 805 aa5.79□□□□□ -1.48
CHD9-204ENST00000561869 FAM187AA6NFU0 413 aa5.78□□□□□ -1.48
CHD9-204ENST00000561869 DGAT1O75907 488 aa5.78□□□□□ -1.48
CHD9-204ENST00000561869 GUCA2AQ02747 115 aa5.78□□□□□ -1.48
CHD9-204ENST00000561869 PKDCCQ504Y2 493 aa5.78□□□□□ -1.48
CHD9-204ENST00000561869 PRDM9Q9NQV7 894 aa5.78□□□□□ -1.48
CHD9-204ENST00000561869 ST8SIA5O15466 376 aa5.77□□□□□ -1.49
CHD9-204ENST00000561869 FMNL1O95466 1100 aaPredicted RBP5.77□□□□□ -1.49
CHD9-204ENST00000561869 NUTM1Q86Y26 1132 aa5.77□□□□□ -1.49
CHD9-204ENST00000561869 PCDHGC3Q9UN70 934 aa5.77□□□□□ -1.49
CHD9-204ENST00000561869 FCF1Q9Y324 198 aaKnown RBP5.77□□□□□ -1.49
CHD9-204ENST00000561869 MOXD2PA6NHM9 499 aa5.76□□□□□ -1.49
CHD9-204ENST00000561869 FOXC1Q12948 553 aa5.76□□□□□ -1.49
CHD9-204ENST00000561869 TBC1D2Q9BYX2 928 aa5.76□□□□□ -1.49
CHD9-204ENST00000561869 NDUFV2P19404 249 aa5.75□□□□□ -1.49
CHD9-204ENST00000561869 Q3C1V9 767 aa5.75□□□□□ -1.49
CHD9-204ENST00000561869 MSS51Q4VC12 460 aa5.75□□□□□ -1.49
CHD9-204ENST00000561869 FDX1P10109 184 aa5.74□□□□□ -1.49
CHD9-204ENST00000561869 TPRNQ4KMQ1 711 aa5.74□□□□□ -1.49
CHD9-204ENST00000561869 SYMPKQ92797 1274 aaKnown RBP5.74□□□□□ -1.49
CHD9-204ENST00000561869 GPBP1L1Q9HC44 474 aaPredicted RBP5.74□□□□□ -1.49
CHD9-204ENST00000561869 AAASQ9NRG9 546 aa5.74□□□□□ -1.49
CHD9-204ENST00000561869 GJA5P36382 358 aa5.73□□□□□ -1.49
CHD9-204ENST00000561869 RPIAP49247 311 aa5.73□□□□□ -1.49
CHD9-204ENST00000561869 MMP16P51512 607 aa5.73□□□□□ -1.49
CHD9-204ENST00000561869 USB1Q9BQ65 265 aaKnown RBP5.73□□□□□ -1.49
CHD9-204ENST00000561869 KDM4CQ9H3R0 1056 aa5.73□□□□□ -1.49
CHD9-204ENST00000561869 SPTLC1O15269 473 aa5.72□□□□□ -1.49
CHD9-204ENST00000561869 MYSM1Q5VVJ2 828 aa5.72□□□□□ -1.49
CHD9-204ENST00000561869 RSBN1LQ6PCB5 846 aaPredicted RBP5.72□□□□□ -1.49
CHD9-204ENST00000561869 TOR4AQ9NXH8 423 aa5.72□□□□□ -1.49
CHD9-204ENST00000561869 DACH1Q9UI36 760 aa5.72□□□□□ -1.49
CHD9-204ENST00000561869 PCDHB15Q9Y5E8 787 aa5.72□□□□□ -1.49
CHD9-204ENST00000561869 DXOO77932 396 aaKnown RBP5.71□□□□□ -1.5
CHD9-204ENST00000561869 DIXDC1Q155Q3 683 aa5.71□□□□□ -1.5
CHD9-204ENST00000561869 RETREG3Q86VR2 466 aa5.71□□□□□ -1.5
CHD9-204ENST00000561869 RIC3Q7Z5B4 369 aa5.7□□□□□ -1.5
CHD9-204ENST00000561869 FAM117AQ9C073 453 aa5.7□□□□□ -1.5
CHD9-204ENST00000561869 LIMD1Q9UGP4 676 aa5.7□□□□□ -1.5
CHD9-204ENST00000561869 PLEKHG3A1L390 1219 aa5.69□□□□□ -1.5
CHD9-204ENST00000561869 CRIPAKQ8N1N5 446 aa5.69□□□□□ -1.5
CHD9-204ENST00000561869 C6orf229H3BNL8 230 aa5.68□□□□□ -1.5
CHD9-204ENST00000561869 CD2BP2O95400 341 aaKnown RBP5.68□□□□□ -1.5
CHD9-204ENST00000561869 AVPP01185 164 aa5.68□□□□□ -1.5
CHD9-204ENST00000561869 JUNDP17535 347 aa5.68□□□□□ -1.5
CHD9-204ENST00000561869 TUSC1Q2TAM9 212 aa5.68□□□□□ -1.5
CHD9-204ENST00000561869 LCE2AQ5TA79 106 aaPredicted RBP5.68□□□□□ -1.5
CHD9-204ENST00000561869 PRKCSHP14314 528 aaPredicted RBP5.67□□□□□ -1.5
CHD9-204ENST00000561869 HRCP23327 699 aa5.67□□□□□ -1.5
CHD9-204ENST00000561869 BRPF1P55201 1214 aaPredicted RBP5.67□□□□□ -1.5
CHD9-204ENST00000561869 MTMR2Q13614 643 aa5.67□□□□□ -1.5
CHD9-204ENST00000561869 CYP4X1Q8N118 509 aa5.67□□□□□ -1.5
CHD9-204ENST00000561869 CABLES1Q8TDN4 633 aa5.67□□□□□ -1.5
CHD9-204ENST00000561869 SPDYE5A6NIY4 337 aa5.66□□□□□ -1.5
CHD9-204ENST00000561869 CFAP99D6REC4 459 aa5.66□□□□□ -1.5
CHD9-204ENST00000561869 LILRB3O75022 631 aa5.66□□□□□ -1.5
CHD9-204ENST00000561869 SMPD1P17405 629 aa5.66□□□□□ -1.5
CHD9-204ENST00000561869 TRIM32Q13049 653 aa5.66□□□□□ -1.5
CHD9-204ENST00000561869 QPCTQ16769 361 aa5.66□□□□□ -1.5
CHD9-204ENST00000561869 PRPF38BQ5VTL8 546 aaKnown RBP5.66□□□□□ -1.5
CHD9-204ENST00000561869 PRR7Q8TB68 274 aa5.66□□□□□ -1.5
CHD9-204ENST00000561869 DDRGK1Q96HY6 314 aa5.66□□□□□ -1.5
CHD9-204ENST00000561869 RSPH6AQ9H0K4 717 aa5.66□□□□□ -1.5
CHD9-204ENST00000561869 GMPR2Q9P2T1 348 aaKnown RBP5.66□□□□□ -1.5
CHD9-204ENST00000561869 WNT7AO00755 349 aa5.65□□□□□ -1.5
CHD9-204ENST00000561869 CLK2P49760 499 aaKnown RBP5.65□□□□□ -1.5
CHD9-204ENST00000561869 SH3D19Q5HYK7 790 aa5.65□□□□□ -1.5
CHD9-204ENST00000561869 FBXO31Q5XUX0 539 aaPredicted RBP5.65□□□□□ -1.5
CHD9-204ENST00000561869 DESI1Q6ICB0 168 aa5.65□□□□□ -1.5
CHD9-204ENST00000561869 ZBTB3Q9H5J0 574 aa5.65□□□□□ -1.5
CHD9-204ENST00000561869 POLR3EQ9NVU0 708 aa5.65□□□□□ -1.5
CHD9-204ENST00000561869 TTC24A2A3L6 582 aaPredicted RBP5.64□□□□□ -1.51
CHD9-204ENST00000561869 J3QL48 77 aa5.64□□□□□ -1.51
CHD9-204ENST00000561869 AXIN1O15169 862 aa5.64□□□□□ -1.51
CHD9-204ENST00000561869 ZBTB24O43167 697 aaPredicted RBP5.64□□□□□ -1.51
CHD9-204ENST00000561869 SMCPP49901 116 aaPredicted RBP5.64□□□□□ -1.51
CHD9-204ENST00000561869 SKIV2LQ15477 1246 aaKnown RBP5.64□□□□□ -1.51
CHD9-204ENST00000561869 NEUROD2Q15784 382 aa5.64□□□□□ -1.51
CHD9-204ENST00000561869 CSPP1Q1MSJ5 1256 aa5.64□□□□□ -1.51
CHD9-204ENST00000561869 RTL5Q5HYW3 569 aaPredicted RBP5.64□□□□□ -1.51
CHD9-204ENST00000561869 PTCRAQ6ISU1 281 aaPredicted RBP5.64□□□□□ -1.51
CHD9-204ENST00000561869 TREML4Q6UXN2 200 aa5.64□□□□□ -1.51
CHD9-204ENST00000561869 PROCA1Q8NCQ7 364 aaPredicted RBP5.64□□□□□ -1.51
CHD9-204ENST00000561869 MRGPRX2Q96LB1 330 aa5.64□□□□□ -1.51
CHD9-204ENST00000561869 SKOR1P84550 965 aa5.63□□□□□ -1.51
CHD9-204ENST00000561869 LYPD8Q6UX82 237 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms