RNA–Protein interactions for RNA: ENST00000561715.1

AC140479.4-201, humanhuman

TSL 4 BASIC

Gene AC140479.4, Length 463 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC140479.4-201ENST00000561715 CDC42BPGQ6DT37 1551 aa28.35■■■□□ 2.13
AC140479.4-201ENST00000561715 DLC1Q96QB1 1528 aa28.34■■■□□ 2.13
AC140479.4-201ENST00000561715 PHLPP1O60346 1717 aa28.32■■■□□ 2.12
AC140479.4-201ENST00000561715 ARHGEF28Q8N1W1 1705 aaKnown RBP28.31■■■□□ 2.12
AC140479.4-201ENST00000561715 SIRT1Q96EB6 747 aa28.27■■■□□ 2.12
AC140479.4-201ENST00000561715 TRPM1Q7Z4N2 1603 aa28.27■■■□□ 2.12
AC140479.4-201ENST00000561715 FMN2Q9NZ56 1722 aa28.26■■■□□ 2.12
AC140479.4-201ENST00000561715 AHDC1Q5TGY3 1603 aaPredicted RBP28.26■■■□□ 2.11
AC140479.4-201ENST00000561715 COL16A1Q07092 1604 aaPredicted RBP28.25■■■□□ 2.11
AC140479.4-201ENST00000561715 BRINP3Q76B58 766 aa28.25■■■□□ 2.11
AC140479.4-201ENST00000561715 PRAM1Q96QH2 718 aa28.25■■■□□ 2.11
AC140479.4-201ENST00000561715 TRAK1Q9UPV9 953 aa28.25■■■□□ 2.11
AC140479.4-201ENST00000561715 C1orf167Q5SNV9 1468 aa28.25■■■□□ 2.11
AC140479.4-201ENST00000561715 NHSL1Q5SYE7 1610 aa28.25■■■□□ 2.11
AC140479.4-201ENST00000561715 PHF23Q9BUL5 403 aaPredicted RBP28.23■■■□□ 2.11
AC140479.4-201ENST00000561715 SAFB2Q14151 953 aaKnown RBP eCLIP28.22■■■□□ 2.11
AC140479.4-201ENST00000561715 NBPF1Q3BBV0 1214 aa28.22■■■□□ 2.11
AC140479.4-201ENST00000561715 ADGRB2O60241 1585 aa28.21■■■□□ 2.11
AC140479.4-201ENST00000561715 POGKQ9P215 609 aa28.19■■■□□ 2.1
AC140479.4-201ENST00000561715 TONSLQ96HA7 1378 aa28.19■■■□□ 2.1
AC140479.4-201ENST00000561715 RGPD8O14715 1765 aaPredicted RBP28.16■■■□□ 2.1
AC140479.4-201ENST00000561715 NUTM2FA1L443 756 aa28.14■■■□□ 2.1
AC140479.4-201ENST00000561715 ORAI2Q96SN7 254 aa28.14■■■□□ 2.1
AC140479.4-201ENST00000561715 NBPF8Q3BBV2 869 aa28.13■■■□□ 2.09
AC140479.4-201ENST00000561715 USP32Q8NFA0 1604 aa28.12■■■□□ 2.09
AC140479.4-201ENST00000561715 DDX17Q92841 729 aaKnown RBP28.12■■■□□ 2.09
AC140479.4-201ENST00000561715 MINK1Q8N4C8 1332 aaPredicted RBP28.12■■■□□ 2.09
AC140479.4-201ENST00000561715 HIRIP3Q9BW71 556 aaPredicted RBP28.1■■■□□ 2.09
AC140479.4-201ENST00000561715 SHPRHQ149N8 1683 aa28.09■■■□□ 2.09
AC140479.4-201ENST00000561715 KIF1AQ12756 1690 aa28.08■■■□□ 2.09
AC140479.4-201ENST00000561715 QRICH2Q9H0J4 1663 aa28.08■■■□□ 2.09
AC140479.4-201ENST00000561715 ESCO1Q5FWF5 840 aa28.07■■■□□ 2.08
AC140479.4-201ENST00000561715 ROCK2O75116 1388 aaKnown RBP28.07■■■□□ 2.08
AC140479.4-201ENST00000561715 JCADQ9P266 1359 aa28.06■■■□□ 2.08
AC140479.4-201ENST00000561715 RALGAPBQ86X10 1494 aa28.05■■■□□ 2.08
AC140479.4-201ENST00000561715 CLSPNQ9HAW4 1339 aa28.04■■■□□ 2.08
AC140479.4-201ENST00000561715 TULP4Q9NRJ4 1543 aa28.03■■■□□ 2.08
AC140479.4-201ENST00000561715 ANKARQ7Z5J8 1434 aa28.02■■■□□ 2.08
AC140479.4-201ENST00000561715 GPRASP1Q5JY77 1395 aa28.02■■■□□ 2.08
AC140479.4-201ENST00000561715 PXDNQ92626 1479 aa28■■■□□ 2.07
AC140479.4-201ENST00000561715 CENPJQ9HC77 1338 aaPredicted RBP27.99■■■□□ 2.07
AC140479.4-201ENST00000561715 WASLO00401 505 aaPredicted RBP27.99■■■□□ 2.07
AC140479.4-201ENST00000561715 SOS2Q07890 1332 aaPredicted RBP27.98■■■□□ 2.07
AC140479.4-201ENST00000561715 PRR36Q9H6K5 1346 aa27.98■■■□□ 2.07
AC140479.4-201ENST00000561715 RGS17Q9UGC6 210 aaPredicted RBP27.98■■■□□ 2.07
AC140479.4-201ENST00000561715 ITSN1Q15811 1721 aa27.98■■■□□ 2.07
AC140479.4-201ENST00000561715 CCER1Q8TC90 406 aaPredicted RBP27.97■■■□□ 2.07
AC140479.4-201ENST00000561715 EIF3AQ14152 1382 aaKnown RBP27.97■■■□□ 2.07
AC140479.4-201ENST00000561715 ATP7BP35670 1465 aa27.96■■■□□ 2.07
AC140479.4-201ENST00000561715 NPHP3Q7Z494 1330 aa27.96■■■□□ 2.07
AC140479.4-201ENST00000561715 FOXO3O43524 673 aa27.96■■■□□ 2.07
AC140479.4-201ENST00000561715 LRP6O75581 1613 aa27.96■■■□□ 2.07
AC140479.4-201ENST00000561715 TOPAZ1Q8N9V7 1692 aa27.95■■■□□ 2.07
AC140479.4-201ENST00000561715 XPCQ01831 940 aaPredicted RBP27.94■■■□□ 2.06
AC140479.4-201ENST00000561715 LRRC59Q96AG4 307 aaKnown RBP27.94■■■□□ 2.06
AC140479.4-201ENST00000561715 PHF8Q9UPP1 1060 aa27.94■■■□□ 2.06
AC140479.4-201ENST00000561715 PNPLA6Q8IY17 1366 aa27.94■■■□□ 2.06
AC140479.4-201ENST00000561715 CARD11Q9BXL7 1154 aa27.91■■■□□ 2.06
AC140479.4-201ENST00000561715 SPATA31A6Q5VVP1 1343 aa27.91■■■□□ 2.06
AC140479.4-201ENST00000561715 CDK19Q9BWU1 502 aa27.9■■■□□ 2.06
AC140479.4-201ENST00000561715 COL22A1Q8NFW1 1626 aaPredicted RBP27.89■■■□□ 2.06
AC140479.4-201ENST00000561715 PMFBP1Q8TBY8 1022 aa27.89■■■□□ 2.06
AC140479.4-201ENST00000561715 NUDT16Q96DE0 195 aaKnown RBP27.86■■■□□ 2.05
AC140479.4-201ENST00000561715 TRPM3Q9HCF6 1732 aaPredicted RBP27.86■■■□□ 2.05
AC140479.4-201ENST00000561715 TIMELESSQ9UNS1 1208 aa27.85■■■□□ 2.05
AC140479.4-201ENST00000561715 NUTM2BA6NNL0 878 aaPredicted RBP27.83■■■□□ 2.05
AC140479.4-201ENST00000561715 NUTM2EB1AL46 878 aaPredicted RBP27.83■■■□□ 2.05
AC140479.4-201ENST00000561715 KRT28Q7Z3Y7 464 aa27.83■■■□□ 2.05
AC140479.4-201ENST00000561715 NUTM2AQ8IVF1 878 aaPredicted RBP27.83■■■□□ 2.05
AC140479.4-201ENST00000561715 SRPK2P78362 688 aaKnown RBP27.81■■■□□ 2.04
AC140479.4-201ENST00000561715 POTEAQ6S8J7 498 aa27.8■■■□□ 2.04
AC140479.4-201ENST00000561715 CABP2Q9NPB3 220 aa27.8■■■□□ 2.04
AC140479.4-201ENST00000561715 TNS3Q68CZ2 1445 aa27.8■■■□□ 2.04
AC140479.4-201ENST00000561715 SPATA31A3Q5VYP0 1347 aa27.79■■■□□ 2.04
AC140479.4-201ENST00000561715 ALS2Q96Q42 1657 aa27.78■■■□□ 2.04
AC140479.4-201ENST00000561715 SBNO2Q9Y2G9 1366 aa27.78■■■□□ 2.04
AC140479.4-201ENST00000561715 PSME1Q06323 249 aa27.78■■■□□ 2.04
AC140479.4-201ENST00000561715 EVC2Q86UK5 1308 aa27.77■■■□□ 2.04
AC140479.4-201ENST00000561715 ABCA3Q99758 1704 aa27.77■■■□□ 2.04
AC140479.4-201ENST00000561715 PPIP5K1Q6PFW1 1433 aa27.76■■■□□ 2.04
AC140479.4-201ENST00000561715 SBNO1A3KN83 1393 aa27.76■■■□□ 2.03
AC140479.4-201ENST00000561715 MEX3CQ5U5Q3 659 aaKnown RBP27.76■■■□□ 2.03
AC140479.4-201ENST00000561715 NGDNQ8NEJ9 315 aaKnown RBP27.76■■■□□ 2.03
AC140479.4-201ENST00000561715 CCDC61Q9Y6R9 512 aa27.76■■■□□ 2.03
AC140479.4-201ENST00000561715 MARF1Q9Y4F3 1742 aaKnown RBP27.75■■■□□ 2.03
AC140479.4-201ENST00000561715 POLR3AO14802 1390 aaPredicted RBP27.74■■■□□ 2.03
AC140479.4-201ENST00000561715 ACEP12821 1306 aa27.71■■■□□ 2.03
AC140479.4-201ENST00000561715 PLEKHG3A1L390 1219 aa27.71■■■□□ 2.03
AC140479.4-201ENST00000561715 USP47Q96K76 1375 aa27.71■■■□□ 2.03
AC140479.4-201ENST00000561715 ADAMTS2O95450 1211 aa27.69■■■□□ 2.02
AC140479.4-201ENST00000561715 ARHGEF10O15013 1369 aa27.69■■■□□ 2.02
AC140479.4-201ENST00000561715 CRYBG1Q9Y4K1 1723 aa27.69■■■□□ 2.02
AC140479.4-201ENST00000561715 ST20-MTHFSA0A0A6YYL1 179 aa27.68■■■□□ 2.02
AC140479.4-201ENST00000561715 LMOD2Q6P5Q4 547 aa27.68■■■□□ 2.02
AC140479.4-201ENST00000561715 AKAP12Q02952 1782 aa27.67■■■□□ 2.02
AC140479.4-201ENST00000561715 TESK2Q96S53 571 aa27.66■■■□□ 2.02
AC140479.4-201ENST00000561715 CABP1Q9NZU7 370 aa27.66■■■□□ 2.02
AC140479.4-201ENST00000561715 C8orf37Q96NL8 207 aa27.65■■■□□ 2.02
AC140479.4-201ENST00000561715 ATAD2Q6PL18 1390 aa27.64■■■□□ 2.02
AC140479.4-201ENST00000561715 PLEKHG5O94827 1062 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms