RNA–Protein interactions for RNA: ENST00000560881.5

RPL28-211, Transcript of ribosomal protein L28, humanhuman

TSL 5

Gene RPL28, Length 1,692 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-211ENST00000560881 ROCK2O75116 1388 aaKnown RBP23.86■■□□□ 1.41
RPL28-211ENST00000560881 RALGAPBQ86X10 1494 aa23.85■■□□□ 1.41
RPL28-211ENST00000560881 DCCP43146 1447 aa23.84■■□□□ 1.41
RPL28-211ENST00000560881 ATF3P18847 181 aa23.83■■□□□ 1.41
RPL28-211ENST00000560881 SIRT1Q96EB6 747 aa23.82■■□□□ 1.4
RPL28-211ENST00000560881 POGKQ9P215 609 aa23.82■■□□□ 1.4
RPL28-211ENST00000560881 CDC42BPGQ6DT37 1551 aa23.82■■□□□ 1.4
RPL28-211ENST00000560881 ROBO1Q9Y6N7 1651 aa23.81■■□□□ 1.4
RPL28-211ENST00000560881 CADPS2Q86UW7 1296 aa23.81■■□□□ 1.4
RPL28-211ENST00000560881 MST1RQ04912 1400 aa23.8■■□□□ 1.4
RPL28-211ENST00000560881 SLAIN2Q9P270 581 aa23.79■■□□□ 1.4
RPL28-211ENST00000560881 TIMELESSQ9UNS1 1208 aa23.79■■□□□ 1.4
RPL28-211ENST00000560881 GPRASP1Q5JY77 1395 aa23.79■■□□□ 1.4
RPL28-211ENST00000560881 HIRIP3Q9BW71 556 aaPredicted RBP23.78■■□□□ 1.4
RPL28-211ENST00000560881 MINK1Q8N4C8 1332 aaPredicted RBP23.78■■□□□ 1.4
RPL28-211ENST00000560881 QRICH2Q9H0J4 1663 aa23.77■■□□□ 1.4
RPL28-211ENST00000560881 FMN2Q9NZ56 1722 aa23.77■■□□□ 1.39
RPL28-211ENST00000560881 ADGRB2O60241 1585 aa23.76■■□□□ 1.39
RPL28-211ENST00000560881 NUTM2FA1L443 756 aa23.75■■□□□ 1.39
RPL28-211ENST00000560881 CARD11Q9BXL7 1154 aa23.75■■□□□ 1.39
RPL28-211ENST00000560881 RGPD8O14715 1765 aaPredicted RBP23.74■■□□□ 1.39
RPL28-211ENST00000560881 C1orf167Q5SNV9 1468 aa23.73■■□□□ 1.39
RPL28-211ENST00000560881 CENPJQ9HC77 1338 aaPredicted RBP23.71■■□□□ 1.39
RPL28-211ENST00000560881 BRINP3Q76B58 766 aa23.7■■□□□ 1.38
RPL28-211ENST00000560881 USP32Q8NFA0 1604 aa23.69■■□□□ 1.38
RPL28-211ENST00000560881 HSPA1LP34931 641 aa23.69■■□□□ 1.38
RPL28-211ENST00000560881 ORAI2Q96SN7 254 aa23.67■■□□□ 1.38
RPL28-211ENST00000560881 EIF3AQ14152 1382 aaKnown RBP23.66■■□□□ 1.38
RPL28-211ENST00000560881 PHLPP1O60346 1717 aa23.66■■□□□ 1.38
RPL28-211ENST00000560881 WASLO00401 505 aaPredicted RBP23.64■■□□□ 1.38
RPL28-211ENST00000560881 DDX17Q92841 729 aaKnown RBP23.64■■□□□ 1.38
RPL28-211ENST00000560881 TULP4Q9NRJ4 1543 aa23.64■■□□□ 1.37
RPL28-211ENST00000560881 NHSL1Q5SYE7 1610 aa23.63■■□□□ 1.37
RPL28-211ENST00000560881 ESCO1Q5FWF5 840 aa23.62■■□□□ 1.37
RPL28-211ENST00000560881 AHDC1Q5TGY3 1603 aaPredicted RBP23.62■■□□□ 1.37
RPL28-211ENST00000560881 PRR36Q9H6K5 1346 aa23.61■■□□□ 1.37
RPL28-211ENST00000560881 COL16A1Q07092 1604 aaPredicted RBP23.6■■□□□ 1.37
RPL28-211ENST00000560881 USP47Q96K76 1375 aa23.6■■□□□ 1.37
RPL28-211ENST00000560881 CDK19Q9BWU1 502 aa23.6■■□□□ 1.37
RPL28-211ENST00000560881 ATP7BP35670 1465 aa23.6■■□□□ 1.37
RPL28-211ENST00000560881 ANKARQ7Z5J8 1434 aa23.59■■□□□ 1.37
RPL28-211ENST00000560881 KIF1AQ12756 1690 aa23.57■■□□□ 1.36
RPL28-211ENST00000560881 ST20-MTHFSA0A0A6YYL1 179 aa23.57■■□□□ 1.36
RPL28-211ENST00000560881 TOPAZ1Q8N9V7 1692 aa23.56■■□□□ 1.36
RPL28-211ENST00000560881 ITSN1Q15811 1721 aa23.56■■□□□ 1.36
RPL28-211ENST00000560881 CABP2Q9NPB3 220 aa23.56■■□□□ 1.36
RPL28-211ENST00000560881 SRPK2P78362 688 aaKnown RBP23.54■■□□□ 1.36
RPL28-211ENST00000560881 SBNO2Q9Y2G9 1366 aa23.54■■□□□ 1.36
RPL28-211ENST00000560881 FOXO3O43524 673 aa23.54■■□□□ 1.36
RPL28-211ENST00000560881 PMFBP1Q8TBY8 1022 aa23.54■■□□□ 1.36
RPL28-211ENST00000560881 NUDT16Q96DE0 195 aaKnown RBP23.54■■□□□ 1.36
RPL28-211ENST00000560881 XPCQ01831 940 aaPredicted RBP23.53■■□□□ 1.36
RPL28-211ENST00000560881 PHF8Q9UPP1 1060 aa23.52■■□□□ 1.36
RPL28-211ENST00000560881 EVC2Q86UK5 1308 aa23.52■■□□□ 1.36
RPL28-211ENST00000560881 TESK2Q96S53 571 aa23.51■■□□□ 1.35
RPL28-211ENST00000560881 PXDNQ92626 1479 aa23.5■■□□□ 1.35
RPL28-211ENST00000560881 NPHP3Q7Z494 1330 aa23.48■■□□□ 1.35
RPL28-211ENST00000560881 SOS2Q07890 1332 aaPredicted RBP23.47■■□□□ 1.35
RPL28-211ENST00000560881 PPIP5K1Q6PFW1 1433 aa23.46■■□□□ 1.35
RPL28-211ENST00000560881 CCDC61Q9Y6R9 512 aa23.45■■□□□ 1.34
RPL28-211ENST00000560881 DISP3Q9P2K9 1392 aa23.45■■□□□ 1.34
RPL28-211ENST00000560881 SHPRHQ149N8 1683 aa23.44■■□□□ 1.34
RPL28-211ENST00000560881 HSPA5P11021 654 aaKnown RBP23.43■■□□□ 1.34
RPL28-211ENST00000560881 NGDNQ8NEJ9 315 aaKnown RBP23.42■■□□□ 1.34
RPL28-211ENST00000560881 TRPM3Q9HCF6 1732 aaPredicted RBP23.42■■□□□ 1.34
RPL28-211ENST00000560881 JCADQ9P266 1359 aa23.42■■□□□ 1.34
RPL28-211ENST00000560881 EIF4G2P78344 907 aaKnown RBP eCLIP23.41■■□□□ 1.34
RPL28-211ENST00000560881 KRT28Q7Z3Y7 464 aa23.41■■□□□ 1.34
RPL28-211ENST00000560881 CABP1Q9NZU7 370 aa23.41■■□□□ 1.34
RPL28-211ENST00000560881 ACEP12821 1306 aa23.4■■□□□ 1.34
RPL28-211ENST00000560881 PSME1Q06323 249 aa23.4■■□□□ 1.34
RPL28-211ENST00000560881 LRRC59Q96AG4 307 aaKnown RBP23.4■■□□□ 1.34
RPL28-211ENST00000560881 ATAD2Q6PL18 1390 aa23.39■■□□□ 1.34
RPL28-211ENST00000560881 PNPLA6Q8IY17 1366 aa23.39■■□□□ 1.34
RPL28-211ENST00000560881 POLR3AO14802 1390 aaPredicted RBP23.38■■□□□ 1.33
RPL28-211ENST00000560881 PLEKHG3A1L390 1219 aa23.38■■□□□ 1.33
RPL28-211ENST00000560881 TMF1P82094 1093 aa23.37■■□□□ 1.33
RPL28-211ENST00000560881 MED1Q15648 1581 aaPredicted RBP23.37■■□□□ 1.33
RPL28-211ENST00000560881 AKAP12Q02952 1782 aa23.36■■□□□ 1.33
RPL28-211ENST00000560881 TNS3Q68CZ2 1445 aa23.35■■□□□ 1.33
RPL28-211ENST00000560881 SPATA31A3Q5VYP0 1347 aa23.35■■□□□ 1.33
RPL28-211ENST00000560881 ALS2Q96Q42 1657 aa23.35■■□□□ 1.33
RPL28-211ENST00000560881 LRP6O75581 1613 aa23.35■■□□□ 1.33
RPL28-211ENST00000560881 COL22A1Q8NFW1 1626 aaPredicted RBP23.34■■□□□ 1.33
RPL28-211ENST00000560881 TMC1Q8TDI8 760 aa23.33■■□□□ 1.33
RPL28-211ENST00000560881 SBNO1A3KN83 1393 aa23.33■■□□□ 1.32
RPL28-211ENST00000560881 LMOD2Q6P5Q4 547 aa23.32■■□□□ 1.32
RPL28-211ENST00000560881 SLC12A5Q9H2X9 1139 aa23.32■■□□□ 1.32
RPL28-211ENST00000560881 CD163L1Q9NR16 1453 aa23.32■■□□□ 1.32
RPL28-211ENST00000560881 MYOM1P52179 1685 aa23.32■■□□□ 1.32
RPL28-211ENST00000560881 PAK3O75914 559 aaPredicted RBP23.32■■□□□ 1.32
RPL28-211ENST00000560881 PLEKHG5O94827 1062 aa23.32■■□□□ 1.32
RPL28-211ENST00000560881 NUTM2BA6NNL0 878 aaPredicted RBP23.31■■□□□ 1.32
RPL28-211ENST00000560881 NUTM2EB1AL46 878 aaPredicted RBP23.31■■□□□ 1.32
RPL28-211ENST00000560881 SLC24A1O60721 1099 aa23.31■■□□□ 1.32
RPL28-211ENST00000560881 NUTM2AQ8IVF1 878 aaPredicted RBP23.31■■□□□ 1.32
RPL28-211ENST00000560881 USP6P35125 1406 aa23.31■■□□□ 1.32
RPL28-211ENST00000560881 MON2Q7Z3U7 1717 aa23.3■■□□□ 1.32
RPL28-211ENST00000560881 SPATA31A6Q5VVP1 1343 aa23.29■■□□□ 1.32
RPL28-211ENST00000560881 NRKQ7Z2Y5 1582 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms