RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 PHF23Q9BUL5 403 aaPredicted RBP22.44■■□□□ 1.18
RABGGTA-219ENST00000560871 BRINP3Q76B58 766 aa22.43■■□□□ 1.18
RABGGTA-219ENST00000560871 DLC1Q96QB1 1528 aa22.41■■□□□ 1.18
RABGGTA-219ENST00000560871 JCADQ9P266 1359 aa22.41■■□□□ 1.18
RABGGTA-219ENST00000560871 NHSL1Q5SYE7 1610 aa22.4■■□□□ 1.18
RABGGTA-219ENST00000560871 SHPRHQ149N8 1683 aa22.38■■□□□ 1.17
RABGGTA-219ENST00000560871 CLSPNQ9HAW4 1339 aa22.37■■□□□ 1.17
RABGGTA-219ENST00000560871 STK26Q9P289 416 aa22.37■■□□□ 1.17
RABGGTA-219ENST00000560871 TRPM1Q7Z4N2 1603 aa22.37■■□□□ 1.17
RABGGTA-219ENST00000560871 PLEKHH1Q9ULM0 1364 aa22.37■■□□□ 1.17
RABGGTA-219ENST00000560871 RGS17Q9UGC6 210 aaPredicted RBP22.36■■□□□ 1.17
RABGGTA-219ENST00000560871 TONSLQ96HA7 1378 aa22.36■■□□□ 1.17
RABGGTA-219ENST00000560871 CDC42BPGQ6DT37 1551 aa22.35■■□□□ 1.17
RABGGTA-219ENST00000560871 C1orf167Q5SNV9 1468 aa22.34■■□□□ 1.17
RABGGTA-219ENST00000560871 SIRT1Q96EB6 747 aa22.34■■□□□ 1.17
RABGGTA-219ENST00000560871 ARHGEF28Q8N1W1 1705 aaKnown RBP22.34■■□□□ 1.17
RABGGTA-219ENST00000560871 SPATA31A6Q5VVP1 1343 aa22.31■■□□□ 1.16
RABGGTA-219ENST00000560871 WAPLQ7Z5K2 1190 aa22.31■■□□□ 1.16
RABGGTA-219ENST00000560871 NBPF1Q3BBV0 1214 aa22.29■■□□□ 1.16
RABGGTA-219ENST00000560871 ADGRB2O60241 1585 aa22.29■■□□□ 1.16
RABGGTA-219ENST00000560871 LRP6O75581 1613 aa22.28■■□□□ 1.16
RABGGTA-219ENST00000560871 TRAK1Q9UPV9 953 aa22.28■■□□□ 1.16
RABGGTA-219ENST00000560871 NBPF8Q3BBV2 869 aa22.27■■□□□ 1.16
RABGGTA-219ENST00000560871 DDX17Q92841 729 aaKnown RBP22.27■■□□□ 1.16
RABGGTA-219ENST00000560871 PRAM1Q96QH2 718 aa22.27■■□□□ 1.16
RABGGTA-219ENST00000560871 ORAI2Q96SN7 254 aa22.27■■□□□ 1.16
RABGGTA-219ENST00000560871 LRRC59Q96AG4 307 aaKnown RBP22.26■■□□□ 1.15
RABGGTA-219ENST00000560871 RALGAPBQ86X10 1494 aa22.26■■□□□ 1.15
RABGGTA-219ENST00000560871 FMN2Q9NZ56 1722 aa22.25■■□□□ 1.15
RABGGTA-219ENST00000560871 GPRASP1Q5JY77 1395 aa22.25■■□□□ 1.15
RABGGTA-219ENST00000560871 POTEAQ6S8J7 498 aa22.23■■□□□ 1.15
RABGGTA-219ENST00000560871 CCER1Q8TC90 406 aaPredicted RBP22.22■■□□□ 1.15
RABGGTA-219ENST00000560871 ROCK2O75116 1388 aaKnown RBP22.22■■□□□ 1.15
RABGGTA-219ENST00000560871 SOS2Q07890 1332 aaPredicted RBP22.21■■□□□ 1.15
RABGGTA-219ENST00000560871 POGKQ9P215 609 aa22.2■■□□□ 1.14
RABGGTA-219ENST00000560871 PNPLA6Q8IY17 1366 aa22.2■■□□□ 1.14
RABGGTA-219ENST00000560871 SAFB2Q14151 953 aaKnown RBP eCLIP22.19■■□□□ 1.14
RABGGTA-219ENST00000560871 ESCO1Q5FWF5 840 aa22.19■■□□□ 1.14
RABGGTA-219ENST00000560871 RGPD8O14715 1765 aaPredicted RBP22.18■■□□□ 1.14
RABGGTA-219ENST00000560871 MEX3CQ5U5Q3 659 aaKnown RBP22.18■■□□□ 1.14
RABGGTA-219ENST00000560871 TIMELESSQ9UNS1 1208 aa22.18■■□□□ 1.14
RABGGTA-219ENST00000560871 NUTM2BA6NNL0 878 aaPredicted RBP22.17■■□□□ 1.14
RABGGTA-219ENST00000560871 NUTM2EB1AL46 878 aaPredicted RBP22.17■■□□□ 1.14
RABGGTA-219ENST00000560871 NUTM2AQ8IVF1 878 aaPredicted RBP22.17■■□□□ 1.14
RABGGTA-219ENST00000560871 USP32Q8NFA0 1604 aa22.17■■□□□ 1.14
RABGGTA-219ENST00000560871 QRICH2Q9H0J4 1663 aa22.15■■□□□ 1.14
RABGGTA-219ENST00000560871 NUTM2FA1L443 756 aa22.15■■□□□ 1.14
RABGGTA-219ENST00000560871 NPHP3Q7Z494 1330 aa22.14■■□□□ 1.14
RABGGTA-219ENST00000560871 TULP4Q9NRJ4 1543 aa22.14■■□□□ 1.13
RABGGTA-219ENST00000560871 KIF1AQ12756 1690 aa22.14■■□□□ 1.13
RABGGTA-219ENST00000560871 COL22A1Q8NFW1 1626 aaPredicted RBP22.13■■□□□ 1.13
RABGGTA-219ENST00000560871 MINK1Q8N4C8 1332 aaPredicted RBP22.13■■□□□ 1.13
RABGGTA-219ENST00000560871 PXDNQ92626 1479 aa22.13■■□□□ 1.13
RABGGTA-219ENST00000560871 ANKARQ7Z5J8 1434 aa22.13■■□□□ 1.13
RABGGTA-219ENST00000560871 CENPJQ9HC77 1338 aaPredicted RBP22.12■■□□□ 1.13
RABGGTA-219ENST00000560871 ZNF772Q68DY9 489 aaPredicted RBP22.12■■□□□ 1.13
RABGGTA-219ENST00000560871 HIRIP3Q9BW71 556 aaPredicted RBP22.12■■□□□ 1.13
RABGGTA-219ENST00000560871 FOXO3O43524 673 aa22.11■■□□□ 1.13
RABGGTA-219ENST00000560871 EIF3AQ14152 1382 aaKnown RBP22.1■■□□□ 1.13
RABGGTA-219ENST00000560871 ATP7BP35670 1465 aa22.09■■□□□ 1.13
RABGGTA-219ENST00000560871 WASLO00401 505 aaPredicted RBP22.09■■□□□ 1.13
RABGGTA-219ENST00000560871 CARD11Q9BXL7 1154 aa22.08■■□□□ 1.13
RABGGTA-219ENST00000560871 PRR36Q9H6K5 1346 aa22.07■■□□□ 1.12
RABGGTA-219ENST00000560871 AFF2P51816 1311 aa22.06■■□□□ 1.12
RABGGTA-219ENST00000560871 TOPAZ1Q8N9V7 1692 aa22.06■■□□□ 1.12
RABGGTA-219ENST00000560871 SBNO2Q9Y2G9 1366 aa22.05■■□□□ 1.12
RABGGTA-219ENST00000560871 XPCQ01831 940 aaPredicted RBP22.05■■□□□ 1.12
RABGGTA-219ENST00000560871 MARF1Q9Y4F3 1742 aaKnown RBP22.05■■□□□ 1.12
RABGGTA-219ENST00000560871 PHF8Q9UPP1 1060 aa22.04■■□□□ 1.12
RABGGTA-219ENST00000560871 ITSN1Q15811 1721 aa22.03■■□□□ 1.12
RABGGTA-219ENST00000560871 C8orf37Q96NL8 207 aa22.03■■□□□ 1.12
RABGGTA-219ENST00000560871 ADAMTS2O95450 1211 aa22.02■■□□□ 1.12
RABGGTA-219ENST00000560871 KRT28Q7Z3Y7 464 aa22.02■■□□□ 1.12
RABGGTA-219ENST00000560871 SPATA31A3Q5VYP0 1347 aa22.01■■□□□ 1.11
RABGGTA-219ENST00000560871 CDK19Q9BWU1 502 aa22■■□□□ 1.11
RABGGTA-219ENST00000560871 RXRBP28702 533 aa21.99■■□□□ 1.11
RABGGTA-219ENST00000560871 NGLY1Q96IV0 654 aa21.99■■□□□ 1.11
RABGGTA-219ENST00000560871 PSME1Q06323 249 aa21.97■■□□□ 1.11
RABGGTA-219ENST00000560871 CDK12Q9NYV4 1490 aaPredicted RBP21.96■■□□□ 1.11
RABGGTA-219ENST00000560871 NUDT16Q96DE0 195 aaKnown RBP21.96■■□□□ 1.11
RABGGTA-219ENST00000560871 USP47Q96K76 1375 aa21.96■■□□□ 1.11
RABGGTA-219ENST00000560871 FNBP4Q8N3X1 1017 aaPredicted RBP21.95■■□□□ 1.1
RABGGTA-219ENST00000560871 PMFBP1Q8TBY8 1022 aa21.95■■□□□ 1.1
RABGGTA-219ENST00000560871 QTRT2Q9H974 415 aaKnown RBP21.95■■□□□ 1.1
RABGGTA-219ENST00000560871 SBNO1A3KN83 1393 aa21.95■■□□□ 1.1
RABGGTA-219ENST00000560871 TNS3Q68CZ2 1445 aa21.95■■□□□ 1.1
RABGGTA-219ENST00000560871 TRPM3Q9HCF6 1732 aaPredicted RBP21.94■■□□□ 1.1
RABGGTA-219ENST00000560871 EVC2Q86UK5 1308 aa21.93■■□□□ 1.1
RABGGTA-219ENST00000560871 CABP2Q9NPB3 220 aa21.93■■□□□ 1.1
RABGGTA-219ENST00000560871 RBM6P78332 1123 aaKnown RBP21.92■■□□□ 1.1
RABGGTA-219ENST00000560871 SRPK2P78362 688 aaKnown RBP21.92■■□□□ 1.1
RABGGTA-219ENST00000560871 TESK2Q96S53 571 aa21.92■■□□□ 1.1
RABGGTA-219ENST00000560871 USP21Q9UK80 565 aa21.92■■□□□ 1.1
RABGGTA-219ENST00000560871 PPIP5K1Q6PFW1 1433 aa21.91■■□□□ 1.1
RABGGTA-219ENST00000560871 POLR3AO14802 1390 aaPredicted RBP21.91■■□□□ 1.1
RABGGTA-219ENST00000560871 ST20-MTHFSA0A0A6YYL1 179 aa21.91■■□□□ 1.1
RABGGTA-219ENST00000560871 CCDC61Q9Y6R9 512 aa21.91■■□□□ 1.1
RABGGTA-219ENST00000560871 ABCA3Q99758 1704 aa21.91■■□□□ 1.1
RABGGTA-219ENST00000560871 ALS2Q96Q42 1657 aa21.89■■□□□ 1.1
RABGGTA-219ENST00000560871 PLEKHG3A1L390 1219 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms