RNA–Protein interactions for RNA: ENST00000560721.6

ZEB1-219, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZEB1, Length 3,368 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-219ENST00000560721 KDM4FA0A1W2PPD8 638 aa7.9□□□□□ -1.15
ZEB1-219ENST00000560721 VGFO15240 615 aaPredicted RBP7.9□□□□□ -1.15
ZEB1-219ENST00000560721 DMRT2Q9Y5R5 561 aa7.9□□□□□ -1.15
ZEB1-219ENST00000560721 FAM50AQ14320 339 aaKnown RBP7.89□□□□□ -1.15
ZEB1-219ENST00000560721 PTPRUQ92729 1446 aa7.89□□□□□ -1.15
ZEB1-219ENST00000560721 POLR3AO14802 1390 aaPredicted RBP7.89□□□□□ -1.15
ZEB1-219ENST00000560721 COL18A1P39060 1754 aa7.89□□□□□ -1.15
ZEB1-219ENST00000560721 RRP7BPQ9NSQ0 103 aa7.89□□□□□ -1.15
ZEB1-219ENST00000560721 PPP1R15AO75807 674 aaPredicted RBP7.88□□□□□ -1.15
ZEB1-219ENST00000560721 NRAPQ86VF7 1730 aa7.88□□□□□ -1.15
ZEB1-219ENST00000560721 CPSF1Q10570 1443 aaKnown RBP7.87□□□□□ -1.15
ZEB1-219ENST00000560721 COL16A1Q07092 1604 aaPredicted RBP7.87□□□□□ -1.15
ZEB1-219ENST00000560721 USP31Q70CQ4 1352 aa7.86□□□□□ -1.15
ZEB1-219ENST00000560721 LRP6O75581 1613 aa7.85□□□□□ -1.15
ZEB1-219ENST00000560721 CCER1Q8TC90 406 aaPredicted RBP7.85□□□□□ -1.15
ZEB1-219ENST00000560721 SLC4A1APQ9BWU0 796 aaKnown RBP7.85□□□□□ -1.15
ZEB1-219ENST00000560721 CD163L1Q9NR16 1453 aa7.84□□□□□ -1.15
ZEB1-219ENST00000560721 PKD1L3Q7Z443 1732 aa7.84□□□□□ -1.15
ZEB1-219ENST00000560721 COL14A1Q05707 1796 aaKnown RBP7.84□□□□□ -1.15
ZEB1-219ENST00000560721 PEAK1Q9H792 1746 aa7.83□□□□□ -1.16
ZEB1-219ENST00000560721 SBNO1A3KN83 1393 aa7.83□□□□□ -1.16
ZEB1-219ENST00000560721 PXDNQ92626 1479 aa7.82□□□□□ -1.16
ZEB1-219ENST00000560721 QSER1Q2KHR3 1735 aa7.82□□□□□ -1.16
ZEB1-219ENST00000560721 IDI1Q13907 227 aa7.82□□□□□ -1.16
ZEB1-219ENST00000560721 ATAD2Q6PL18 1390 aa7.82□□□□□ -1.16
ZEB1-219ENST00000560721 GLI3P10071 1580 aa7.82□□□□□ -1.16
ZEB1-219ENST00000560721 LRRC37A3O60309 1634 aa7.82□□□□□ -1.16
ZEB1-219ENST00000560721 ZNF777Q9ULD5 760 aaPredicted RBP7.82□□□□□ -1.16
ZEB1-219ENST00000560721 COL24A1Q17RW2 1714 aa7.82□□□□□ -1.16
ZEB1-219ENST00000560721 N4BP2Q86UW6 1770 aaPredicted RBP7.82□□□□□ -1.16
ZEB1-219ENST00000560721 KCNA6P17658 529 aa7.81□□□□□ -1.16
ZEB1-219ENST00000560721 DIEXFQ68CQ4 756 aaKnown RBP7.81□□□□□ -1.16
ZEB1-219ENST00000560721 NFAT5O94916 1531 aa7.8□□□□□ -1.16
ZEB1-219ENST00000560721 RGPD8O14715 1765 aaPredicted RBP7.8□□□□□ -1.16
ZEB1-219ENST00000560721 TONSLQ96HA7 1378 aa7.8□□□□□ -1.16
ZEB1-219ENST00000560721 NEUROD1Q13562 356 aa7.8□□□□□ -1.16
ZEB1-219ENST00000560721 ATP1B4Q9UN42 357 aaPredicted RBP7.8□□□□□ -1.16
ZEB1-219ENST00000560721 PAPPAQ13219 1627 aa7.79□□□□□ -1.16
ZEB1-219ENST00000560721 AATKQ6ZMQ8 1374 aa7.79□□□□□ -1.16
ZEB1-219ENST00000560721 CFAP65Q6ZU64 1925 aaKnown RBP7.78□□□□□ -1.16
ZEB1-219ENST00000560721 SIPA1L3O60292 1781 aaPredicted RBP7.78□□□□□ -1.16
ZEB1-219ENST00000560721 RREB1Q92766 1687 aa7.78□□□□□ -1.16
ZEB1-219ENST00000560721 ROBO1Q9Y6N7 1651 aa7.78□□□□□ -1.16
ZEB1-219ENST00000560721 CDCA8Q53HL2 280 aa7.77□□□□□ -1.17
ZEB1-219ENST00000560721 ANKLE2Q86XL3 938 aa7.77□□□□□ -1.17
ZEB1-219ENST00000560721 RTL1A6NKG5 1358 aa7.77□□□□□ -1.17
ZEB1-219ENST00000560721 EDC4Q6P2E9 1401 aaKnown RBP7.77□□□□□ -1.17
ZEB1-219ENST00000560721 PHLPP1O60346 1717 aa7.77□□□□□ -1.17
ZEB1-219ENST00000560721 OVOS2A0A0G2JMS6 1433 aa7.76□□□□□ -1.17
ZEB1-219ENST00000560721 BCL9O00512 1426 aa7.76□□□□□ -1.17
ZEB1-219ENST00000560721 PLEKHG3A1L390 1219 aa7.76□□□□□ -1.17
ZEB1-219ENST00000560721 ZNF316A6NFI3 1004 aaPredicted RBP7.76□□□□□ -1.17
ZEB1-219ENST00000560721 TRHP20396 242 aaPredicted RBP7.76□□□□□ -1.17
ZEB1-219ENST00000560721 THSD7AQ9UPZ6 1657 aa7.76□□□□□ -1.17
ZEB1-219ENST00000560721 LTN1O94822 1766 aa7.76□□□□□ -1.17
ZEB1-219ENST00000560721 ANKRD36BQ8N2N9 1353 aa7.76□□□□□ -1.17
ZEB1-219ENST00000560721 TESK2Q96S53 571 aa7.75□□□□□ -1.17
ZEB1-219ENST00000560721 OVOS2A0A0J9YW53 1432 aa7.75□□□□□ -1.17
ZEB1-219ENST00000560721 OVOS2Q6IE36 1432 aa7.75□□□□□ -1.17
ZEB1-219ENST00000560721 SHANK3Q9BYB0 1731 aa7.75□□□□□ -1.17
ZEB1-219ENST00000560721 COL3A1P02461 1466 aaPredicted RBP7.75□□□□□ -1.17
ZEB1-219ENST00000560721 TMEM94Q12767 1356 aa7.75□□□□□ -1.17
ZEB1-219ENST00000560721 IBTKQ9P2D0 1353 aaPredicted RBP7.75□□□□□ -1.17
ZEB1-219ENST00000560721 CENPBP07199 599 aaPredicted RBP7.74□□□□□ -1.17
ZEB1-219ENST00000560721 EID1Q9Y6B2 187 aa7.74□□□□□ -1.17
ZEB1-219ENST00000560721 METP08581 1390 aa7.74□□□□□ -1.17
ZEB1-219ENST00000560721 USP47Q96K76 1375 aa7.73□□□□□ -1.17
ZEB1-219ENST00000560721 CPDO75976 1380 aa7.73□□□□□ -1.17
ZEB1-219ENST00000560721 C1orf167Q5SNV9 1468 aa7.73□□□□□ -1.17
ZEB1-219ENST00000560721 L3MBTL2Q969R5 705 aa7.73□□□□□ -1.17
ZEB1-219ENST00000560721 VIRMAQ69YN4 1812 aaKnown RBP7.73□□□□□ -1.17
ZEB1-219ENST00000560721 TTC21AQ8NDW8 1320 aa7.72□□□□□ -1.17
ZEB1-219ENST00000560721 DAXXQ9UER7 740 aaPredicted RBP7.71□□□□□ -1.17
ZEB1-219ENST00000560721 CHIC2Q9UKJ5 165 aa7.71□□□□□ -1.17
ZEB1-219ENST00000560721 ESF1Q9H501 851 aaKnown RBP7.71□□□□□ -1.18
ZEB1-219ENST00000560721 USP19O94966 1318 aa7.71□□□□□ -1.18
ZEB1-219ENST00000560721 PNPLA6Q8IY17 1366 aa7.71□□□□□ -1.18
ZEB1-219ENST00000560721 ADGRF5Q8IZF2 1346 aa7.71□□□□□ -1.18
ZEB1-219ENST00000560721 CCDC7Q96M83 1385 aa7.71□□□□□ -1.18
ZEB1-219ENST00000560721 ROBO2Q9HCK4 1378 aa7.71□□□□□ -1.18
ZEB1-219ENST00000560721 RANGAP1P46060 587 aaPredicted RBP7.7□□□□□ -1.18
ZEB1-219ENST00000560721 GTF3C3Q9Y5Q9 886 aa7.7□□□□□ -1.18
ZEB1-219ENST00000560721 PARD3Q8TEW0 1356 aa7.7□□□□□ -1.18
ZEB1-219ENST00000560721 UBR2Q8IWV8 1755 aa7.7□□□□□ -1.18
ZEB1-219ENST00000560721 MRC1P22897 1456 aa7.69□□□□□ -1.18
ZEB1-219ENST00000560721 USP6P35125 1406 aa7.69□□□□□ -1.18
ZEB1-219ENST00000560721 PPIP5K1Q6PFW1 1433 aa7.69□□□□□ -1.18
ZEB1-219ENST00000560721 ARID3CA6NKF2 412 aa7.68□□□□□ -1.18
ZEB1-219ENST00000560721 LTKP29376 864 aa7.68□□□□□ -1.18
ZEB1-219ENST00000560721 GGT6Q6P531 493 aa7.68□□□□□ -1.18
ZEB1-219ENST00000560721 BLMP54132 1417 aaPredicted RBP7.68□□□□□ -1.18
ZEB1-219ENST00000560721 NBPF8Q3BBV2 869 aa7.68□□□□□ -1.18
ZEB1-219ENST00000560721 FBXO31Q5XUX0 539 aaPredicted RBP7.67□□□□□ -1.18
ZEB1-219ENST00000560721 NGEFQ8N5V2 710 aa7.67□□□□□ -1.18
ZEB1-219ENST00000560721 CENPJQ9HC77 1338 aaPredicted RBP7.67□□□□□ -1.18
ZEB1-219ENST00000560721 ZNF692Q9BU19 519 aaPredicted RBP7.67□□□□□ -1.18
ZEB1-219ENST00000560721 LAMB4A4D0S4 1761 aa7.66□□□□□ -1.18
ZEB1-219ENST00000560721 ARHGEF10O15013 1369 aa7.66□□□□□ -1.18
ZEB1-219ENST00000560721 TNS3Q68CZ2 1445 aa7.66□□□□□ -1.18
ZEB1-219ENST00000560721 EVC2Q86UK5 1308 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms