RNA–Protein interactions for RNA: ENST00000560240.5

COPS2-207, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 4

Gene COPS2, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-207ENST00000560240 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.32□□□□□ -0.6
COPS2-207ENST00000560240 PLEKHH1Q9ULM0 1364 aa11.32□□□□□ -0.6
COPS2-207ENST00000560240 SLC24A1O60721 1099 aa11.32□□□□□ -0.6
COPS2-207ENST00000560240 WAPLQ7Z5K2 1190 aa11.32□□□□□ -0.6
COPS2-207ENST00000560240 POGKQ9P215 609 aa11.32□□□□□ -0.6
COPS2-207ENST00000560240 CENPJQ9HC77 1338 aaPredicted RBP11.32□□□□□ -0.6
COPS2-207ENST00000560240 CADPS2Q86UW7 1296 aa11.31□□□□□ -0.6
COPS2-207ENST00000560240 QRICH2Q9H0J4 1663 aa11.3□□□□□ -0.6
COPS2-207ENST00000560240 USP47Q96K76 1375 aa11.29□□□□□ -0.6
COPS2-207ENST00000560240 TOM1O60784 492 aa11.29□□□□□ -0.6
COPS2-207ENST00000560240 C14orf37Q86TY3 774 aa11.29□□□□□ -0.6
COPS2-207ENST00000560240 ATF3P18847 181 aa11.28□□□□□ -0.6
COPS2-207ENST00000560240 RBM33Q96EV2 1170 aaKnown RBP11.28□□□□□ -0.6
COPS2-207ENST00000560240 MST1RQ04912 1400 aa11.27□□□□□ -0.6
COPS2-207ENST00000560240 ANKARQ7Z5J8 1434 aa11.27□□□□□ -0.6
COPS2-207ENST00000560240 FMN2Q9NZ56 1722 aa11.27□□□□□ -0.61
COPS2-207ENST00000560240 TULP4Q9NRJ4 1543 aa11.26□□□□□ -0.61
COPS2-207ENST00000560240 WASLO00401 505 aaPredicted RBP11.26□□□□□ -0.61
COPS2-207ENST00000560240 EIF4G2P78344 907 aaKnown RBP eCLIP11.26□□□□□ -0.61
COPS2-207ENST00000560240 PUS7Q96PZ0 661 aaKnown RBP11.26□□□□□ -0.61
COPS2-207ENST00000560240 TESK2Q96S53 571 aa11.26□□□□□ -0.61
COPS2-207ENST00000560240 SLAIN2Q9P270 581 aa11.26□□□□□ -0.61
COPS2-207ENST00000560240 ST20-MTHFSA0A0A6YYL1 179 aa11.25□□□□□ -0.61
COPS2-207ENST00000560240 SAFB2Q14151 953 aaKnown RBP eCLIP11.25□□□□□ -0.61
COPS2-207ENST00000560240 EVC2Q86UK5 1308 aa11.25□□□□□ -0.61
COPS2-207ENST00000560240 MINK1Q8N4C8 1332 aaPredicted RBP11.25□□□□□ -0.61
COPS2-207ENST00000560240 C1orf167Q5SNV9 1468 aa11.25□□□□□ -0.61
COPS2-207ENST00000560240 UBAP1LF5GYI3 381 aa11.24□□□□□ -0.61
COPS2-207ENST00000560240 ATP7BP35670 1465 aa11.23□□□□□ -0.61
COPS2-207ENST00000560240 USP32Q8NFA0 1604 aa11.23□□□□□ -0.61
COPS2-207ENST00000560240 ITSN1Q15811 1721 aa11.22□□□□□ -0.61
COPS2-207ENST00000560240 FBXO41Q8TF61 875 aa11.22□□□□□ -0.61
COPS2-207ENST00000560240 HIRIP3Q9BW71 556 aaPredicted RBP11.22□□□□□ -0.61
COPS2-207ENST00000560240 CDK19Q9BWU1 502 aa11.22□□□□□ -0.61
COPS2-207ENST00000560240 KIF1AQ12756 1690 aa11.21□□□□□ -0.61
COPS2-207ENST00000560240 TOPAZ1Q8N9V7 1692 aa11.21□□□□□ -0.61
COPS2-207ENST00000560240 ATAD2Q6PL18 1390 aa11.21□□□□□ -0.61
COPS2-207ENST00000560240 ROBO1Q9Y6N7 1651 aa11.2□□□□□ -0.62
COPS2-207ENST00000560240 HSPA5P11021 654 aaKnown RBP11.2□□□□□ -0.62
COPS2-207ENST00000560240 TMF1P82094 1093 aa11.2□□□□□ -0.62
COPS2-207ENST00000560240 CDCA8Q53HL2 280 aa11.2□□□□□ -0.62
COPS2-207ENST00000560240 BRINP3Q76B58 766 aa11.2□□□□□ -0.62
COPS2-207ENST00000560240 CCDC61Q9Y6R9 512 aa11.2□□□□□ -0.62
COPS2-207ENST00000560240 AHDC1Q5TGY3 1603 aaPredicted RBP11.2□□□□□ -0.62
COPS2-207ENST00000560240 NINLQ9Y2I6 1382 aa11.19□□□□□ -0.62
COPS2-207ENST00000560240 PRR36Q9H6K5 1346 aa11.19□□□□□ -0.62
COPS2-207ENST00000560240 NUDT16Q96DE0 195 aaKnown RBP11.19□□□□□ -0.62
COPS2-207ENST00000560240 NHSL1Q5SYE7 1610 aa11.19□□□□□ -0.62
COPS2-207ENST00000560240 RGPD8O14715 1765 aaPredicted RBP11.18□□□□□ -0.62
COPS2-207ENST00000560240 PLEKHG3A1L390 1219 aa11.18□□□□□ -0.62
COPS2-207ENST00000560240 SRPK2P78362 688 aaKnown RBP11.18□□□□□ -0.62
COPS2-207ENST00000560240 POLR3AO14802 1390 aaPredicted RBP11.17□□□□□ -0.62
COPS2-207ENST00000560240 DISP3Q9P2K9 1392 aa11.17□□□□□ -0.62
COPS2-207ENST00000560240 ORAI2Q96SN7 254 aa11.17□□□□□ -0.62
COPS2-207ENST00000560240 CABP2Q9NPB3 220 aa11.17□□□□□ -0.62
COPS2-207ENST00000560240 PHF8Q9UPP1 1060 aa11.17□□□□□ -0.62
COPS2-207ENST00000560240 NPHP3Q7Z494 1330 aa11.16□□□□□ -0.62
COPS2-207ENST00000560240 PIP4K2BP78356 416 aa11.16□□□□□ -0.62
COPS2-207ENST00000560240 ESCO1Q5FWF5 840 aa11.16□□□□□ -0.62
COPS2-207ENST00000560240 PPIP5K1Q6PFW1 1433 aa11.16□□□□□ -0.62
COPS2-207ENST00000560240 BRD4O60885 1362 aaPredicted RBP11.16□□□□□ -0.62
COPS2-207ENST00000560240 NUTM2FA1L443 756 aa11.15□□□□□ -0.62
COPS2-207ENST00000560240 SOS2Q07890 1332 aaPredicted RBP11.14□□□□□ -0.63
COPS2-207ENST00000560240 PXDNQ92626 1479 aa11.14□□□□□ -0.63
COPS2-207ENST00000560240 CPSF1Q10570 1443 aaKnown RBP11.14□□□□□ -0.63
COPS2-207ENST00000560240 COL16A1Q07092 1604 aaPredicted RBP11.13□□□□□ -0.63
COPS2-207ENST00000560240 SBNO1A3KN83 1393 aa11.13□□□□□ -0.63
COPS2-207ENST00000560240 PHLPP1O60346 1717 aa11.12□□□□□ -0.63
COPS2-207ENST00000560240 SCAF1Q9H7N4 1312 aaKnown RBP11.12□□□□□ -0.63
COPS2-207ENST00000560240 FOXO3O43524 673 aa11.12□□□□□ -0.63
COPS2-207ENST00000560240 ZNF692Q9BU19 519 aaPredicted RBP11.12□□□□□ -0.63
COPS2-207ENST00000560240 CABP1Q9NZU7 370 aa11.12□□□□□ -0.63
COPS2-207ENST00000560240 CD163L1Q9NR16 1453 aa11.12□□□□□ -0.63
COPS2-207ENST00000560240 ACEP12821 1306 aa11.11□□□□□ -0.63
COPS2-207ENST00000560240 MYOM1P52179 1685 aa11.11□□□□□ -0.63
COPS2-207ENST00000560240 AKAP12Q02952 1782 aa11.11□□□□□ -0.63
COPS2-207ENST00000560240 PSME1Q06323 249 aa11.11□□□□□ -0.63
COPS2-207ENST00000560240 NGDNQ8NEJ9 315 aaKnown RBP11.11□□□□□ -0.63
COPS2-207ENST00000560240 PMFBP1Q8TBY8 1022 aa11.11□□□□□ -0.63
COPS2-207ENST00000560240 USP6P35125 1406 aa11.1□□□□□ -0.63
COPS2-207ENST00000560240 SSH2Q76I76 1423 aa11.1□□□□□ -0.63
COPS2-207ENST00000560240 MON2Q7Z3U7 1717 aa11.1□□□□□ -0.63
COPS2-207ENST00000560240 TRPM3Q9HCF6 1732 aaPredicted RBP11.1□□□□□ -0.63
COPS2-207ENST00000560240 C11orf95C9JLR9 678 aaPredicted RBP11.1□□□□□ -0.63
COPS2-207ENST00000560240 LRRC59Q96AG4 307 aaKnown RBP11.1□□□□□ -0.63
COPS2-207ENST00000560240 TERF2IPQ9NYB0 399 aa11.1□□□□□ -0.63
COPS2-207ENST00000560240 ANKRD36BQ8N2N9 1353 aa11.1□□□□□ -0.63
COPS2-207ENST00000560240 KIF7Q2M1P5 1343 aa11.09□□□□□ -0.63
COPS2-207ENST00000560240 NRKQ7Z2Y5 1582 aa11.09□□□□□ -0.63
COPS2-207ENST00000560240 CCDC7Q96M83 1385 aa11.09□□□□□ -0.63
COPS2-207ENST00000560240 HSPA1LP34931 641 aa11.09□□□□□ -0.63
COPS2-207ENST00000560240 KRT28Q7Z3Y7 464 aa11.09□□□□□ -0.63
COPS2-207ENST00000560240 SLC12A5Q9H2X9 1139 aa11.09□□□□□ -0.63
COPS2-207ENST00000560240 TNS3Q68CZ2 1445 aa11.09□□□□□ -0.63
COPS2-207ENST00000560240 SPATA31A3Q5VYP0 1347 aa11.09□□□□□ -0.63
COPS2-207ENST00000560240 SHPRHQ149N8 1683 aa11.08□□□□□ -0.64
COPS2-207ENST00000560240 ALS2Q96Q42 1657 aa11.08□□□□□ -0.64
COPS2-207ENST00000560240 A0A1W2PP64 1363 aa11.08□□□□□ -0.64
COPS2-207ENST00000560240 ARHGEF10O15013 1369 aa11.08□□□□□ -0.64
COPS2-207ENST00000560240 HDGFL2Q7Z4V5 671 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms