RNA–Protein interactions for RNA: ENST00000559476.2

ZEB1-215, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 1,205 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-215ENST00000559476 TRIM67Q6ZTA4 783 aa9.22□□□□□ -0.93
ZEB1-215ENST00000559476 DGAT1O75907 488 aa9.21□□□□□ -0.94
ZEB1-215ENST00000559476 USP46P62068 366 aa9.21□□□□□ -0.94
ZEB1-215ENST00000559476 MSS51Q4VC12 460 aa9.21□□□□□ -0.94
ZEB1-215ENST00000559476 BRICD5Q6PL45 260 aa9.21□□□□□ -0.94
ZEB1-215ENST00000559476 PKDCCQ504Y2 493 aa9.19□□□□□ -0.94
ZEB1-215ENST00000559476 PLA2G2CQ5R387 149 aa9.19□□□□□ -0.94
ZEB1-215ENST00000559476 GDF9O60383 454 aa9.18□□□□□ -0.94
ZEB1-215ENST00000559476 KDM4AO75164 1064 aa9.18□□□□□ -0.94
ZEB1-215ENST00000559476 CD2BP2O95400 341 aaKnown RBP9.18□□□□□ -0.94
ZEB1-215ENST00000559476 CLCN1P35523 988 aa9.18□□□□□ -0.94
ZEB1-215ENST00000559476 MDM2Q00987 491 aaPredicted RBP9.18□□□□□ -0.94
ZEB1-215ENST00000559476 FAM160A2Q8N612 972 aaPredicted RBP9.18□□□□□ -0.94
ZEB1-215ENST00000559476 KRI1Q8N9T8 703 aaKnown RBP9.18□□□□□ -0.94
ZEB1-215ENST00000559476 CCDC102AQ96A19 550 aa9.18□□□□□ -0.94
ZEB1-215ENST00000559476 PCGF6Q9BYE7 350 aa9.18□□□□□ -0.94
ZEB1-215ENST00000559476 GPCPD1Q9NPB8 672 aa9.17□□□□□ -0.94
ZEB1-215ENST00000559476 FCF1Q9Y324 198 aaKnown RBP9.17□□□□□ -0.94
ZEB1-215ENST00000559476 PEG3Q9GZU2 1588 aa9.16□□□□□ -0.94
ZEB1-215ENST00000559476 ZBTB24O43167 697 aaPredicted RBP9.14□□□□□ -0.95
ZEB1-215ENST00000559476 RNF19BQ6ZMZ0 732 aa9.14□□□□□ -0.95
ZEB1-215ENST00000559476 EIF4G1Q04637 1599 aaKnown RBP9.14□□□□□ -0.95
ZEB1-215ENST00000559476 TOP2AP11388 1531 aaKnown RBP9.14□□□□□ -0.95
ZEB1-215ENST00000559476 TNFRSF10AO00220 468 aa9.13□□□□□ -0.95
ZEB1-215ENST00000559476 MMP16P51512 607 aa9.13□□□□□ -0.95
ZEB1-215ENST00000559476 SMARCA2P51531 1590 aa9.12□□□□□ -0.95
ZEB1-215ENST00000559476 FAM187AA6NFU0 413 aa9.12□□□□□ -0.95
ZEB1-215ENST00000559476 ZMYND10O75800 440 aa9.12□□□□□ -0.95
ZEB1-215ENST00000559476 ZNF787Q6DD87 383 aa9.12□□□□□ -0.95
ZEB1-215ENST00000559476 BARGINQ6ZT62 677 aa9.12□□□□□ -0.95
ZEB1-215ENST00000559476 USB1Q9BQ65 265 aaKnown RBP9.12□□□□□ -0.95
ZEB1-215ENST00000559476 FAM217BQ9NTX9 383 aaPredicted RBP9.12□□□□□ -0.95
ZEB1-215ENST00000559476 HOXA2O43364 376 aa9.11□□□□□ -0.95
ZEB1-215ENST00000559476 PRDM9Q9NQV7 894 aa9.11□□□□□ -0.95
ZEB1-215ENST00000559476 PKD2L1Q9P0L9 805 aa9.11□□□□□ -0.95
ZEB1-215ENST00000559476 TRIM26Q12899 539 aaPredicted RBP9.1□□□□□ -0.95
ZEB1-215ENST00000559476 NUTM1Q86Y26 1132 aa9.1□□□□□ -0.95
ZEB1-215ENST00000559476 ZC3H15Q8WU90 426 aaKnown RBP9.1□□□□□ -0.95
ZEB1-215ENST00000559476 FOXC1Q12948 553 aa9.09□□□□□ -0.95
ZEB1-215ENST00000559476 DXOO77932 396 aaKnown RBP9.08□□□□□ -0.96
ZEB1-215ENST00000559476 SLC24A1O60721 1099 aa9.07□□□□□ -0.96
ZEB1-215ENST00000559476 CYP4X1Q8N118 509 aa9.07□□□□□ -0.96
ZEB1-215ENST00000559476 TOR4AQ9NXH8 423 aa9.06□□□□□ -0.96
ZEB1-215ENST00000559476 ATAD2BQ9ULI0 1458 aa9.05□□□□□ -0.96
ZEB1-215ENST00000559476 WNT7AO00755 349 aa9.05□□□□□ -0.96
ZEB1-215ENST00000559476 TRIM32Q13049 653 aa9.05□□□□□ -0.96
ZEB1-215ENST00000559476 TTLL12Q14166 644 aaPredicted RBP9.05□□□□□ -0.96
ZEB1-215ENST00000559476 CRIPAKQ8N1N5 446 aa9.05□□□□□ -0.96
ZEB1-215ENST00000559476 HMGXB3Q12766 1538 aa9.05□□□□□ -0.96
ZEB1-215ENST00000559476 BAZ1BQ9UIG0 1483 aaKnown RBP9.04□□□□□ -0.96
ZEB1-215ENST00000559476 AVPP01185 164 aa9.04□□□□□ -0.96
ZEB1-215ENST00000559476 AMHR2Q16671 573 aa9.04□□□□□ -0.96
ZEB1-215ENST00000559476 JUNDP17535 347 aa9.03□□□□□ -0.96
ZEB1-215ENST00000559476 SSTR3P32745 418 aaPredicted RBP9.03□□□□□ -0.96
ZEB1-215ENST00000559476 CTC1Q2NKJ3 1217 aa9.03□□□□□ -0.96
ZEB1-215ENST00000559476 RETREG3Q86VR2 466 aa9.03□□□□□ -0.96
ZEB1-215ENST00000559476 REPIN1Q9BWE0 567 aaKnown RBP9.03□□□□□ -0.96
ZEB1-215ENST00000559476 CC2D2AQ9P2K1 1620 aa9.02□□□□□ -0.96
ZEB1-215ENST00000559476 HLA-CQ95604 372 aa9.02□□□□□ -0.97
ZEB1-215ENST00000559476 AK7Q96M32 723 aa9.02□□□□□ -0.97
ZEB1-215ENST00000559476 AAASQ9NRG9 546 aa9.02□□□□□ -0.97
ZEB1-215ENST00000559476 TTC24A2A3L6 582 aaPredicted RBP9.01□□□□□ -0.97
ZEB1-215ENST00000559476 FDX1P10109 184 aa9.01□□□□□ -0.97
ZEB1-215ENST00000559476 SNIP1Q8TAD8 396 aaKnown RBP9.01□□□□□ -0.97
ZEB1-215ENST00000559476 CENPBP07199 599 aaPredicted RBP9□□□□□ -0.97
ZEB1-215ENST00000559476 SMCPP49901 116 aaPredicted RBP9□□□□□ -0.97
ZEB1-215ENST00000559476 WNT7BP56706 349 aa9□□□□□ -0.97
ZEB1-215ENST00000559476 DIXDC1Q155Q3 683 aa9□□□□□ -0.97
ZEB1-215ENST00000559476 CCDC24Q8N4L8 307 aa9□□□□□ -0.97
ZEB1-215ENST00000559476 TTBK1Q5TCY1 1321 aaPredicted RBP9□□□□□ -0.97
ZEB1-215ENST00000559476 PRDM2Q13029 1718 aa9□□□□□ -0.97
ZEB1-215ENST00000559476 GUCA2AQ02747 115 aa8.99□□□□□ -0.97
ZEB1-215ENST00000559476 SPIRE2Q8WWL2 714 aa8.99□□□□□ -0.97
ZEB1-215ENST00000559476 AXIN1O15169 862 aa8.98□□□□□ -0.97
ZEB1-215ENST00000559476 GIGYF2Q6Y7W6 1299 aaKnown RBP8.98□□□□□ -0.97
ZEB1-215ENST00000559476 BCANQ96GW7 911 aa8.98□□□□□ -0.97
ZEB1-215ENST00000559476 SPDYE5A6NIY4 337 aa8.97□□□□□ -0.97
ZEB1-215ENST00000559476 C6orf229H3BNL8 230 aa8.97□□□□□ -0.97
ZEB1-215ENST00000559476 GJA5P36382 358 aa8.97□□□□□ -0.97
ZEB1-215ENST00000559476 CCDC88BA6NC98 1476 aa8.96□□□□□ -0.97
ZEB1-215ENST00000559476 NCAPD3P42695 1498 aa8.96□□□□□ -0.97
ZEB1-215ENST00000559476 TRIM66O15016 1216 aa8.96□□□□□ -0.98
ZEB1-215ENST00000559476 ST8SIA5O15466 376 aa8.96□□□□□ -0.98
ZEB1-215ENST00000559476 SYMPKQ92797 1274 aaKnown RBP8.96□□□□□ -0.98
ZEB1-215ENST00000559476 ZNF775Q96BV0 537 aaPredicted RBP8.96□□□□□ -0.98
ZEB1-215ENST00000559476 MRGPRX2Q96LB1 330 aa8.96□□□□□ -0.98
ZEB1-215ENST00000559476 NUDT12Q9BQG2 462 aa8.96□□□□□ -0.98
ZEB1-215ENST00000559476 MS4A1P11836 297 aa8.95□□□□□ -0.98
ZEB1-215ENST00000559476 PPARGC1BQ86YN6 1023 aaKnown RBP8.95□□□□□ -0.98
ZEB1-215ENST00000559476 PCDHGC3Q9UN70 934 aa8.95□□□□□ -0.98
ZEB1-215ENST00000559476 PTPRNQ16849 979 aa8.94□□□□□ -0.98
ZEB1-215ENST00000559476 RC3H1Q5TC82 1133 aaKnown RBP8.94□□□□□ -0.98
ZEB1-215ENST00000559476 MOXD2PA6NHM9 499 aa8.93□□□□□ -0.98
ZEB1-215ENST00000559476 CCNYL3P0C7X3 344 aa8.93□□□□□ -0.98
ZEB1-215ENST00000559476 SMPD1P17405 629 aa8.93□□□□□ -0.98
ZEB1-215ENST00000559476 DESI1Q6ICB0 168 aa8.93□□□□□ -0.98
ZEB1-215ENST00000559476 BEGAINQ9BUH8 593 aa8.93□□□□□ -0.98
ZEB1-215ENST00000559476 POTECB2RU33 542 aa8.92□□□□□ -0.98
ZEB1-215ENST00000559476 MTMR2Q13614 643 aa8.92□□□□□ -0.98
ZEB1-215ENST00000559476 PARP9Q8IXQ6 854 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms