RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 POGKQ9P215 609 aa24.81■■□□□ 1.56
TPM1-214ENST00000558544 CDC42BPGQ6DT37 1551 aa24.79■■□□□ 1.56
TPM1-214ENST00000558544 C19orf44Q9H6X5 657 aa24.79■■□□□ 1.56
TPM1-214ENST00000558544 ADGRB2O60241 1585 aa24.78■■□□□ 1.56
TPM1-214ENST00000558544 DCCP43146 1447 aa24.77■■□□□ 1.56
TPM1-214ENST00000558544 EIF3AQ14152 1382 aaKnown RBP24.76■■□□□ 1.55
TPM1-214ENST00000558544 FMN2Q9NZ56 1722 aa24.76■■□□□ 1.55
TPM1-214ENST00000558544 UBAP1LF5GYI3 381 aa24.76■■□□□ 1.55
TPM1-214ENST00000558544 MINK1Q8N4C8 1332 aaPredicted RBP24.73■■□□□ 1.55
TPM1-214ENST00000558544 CENPJQ9HC77 1338 aaPredicted RBP24.73■■□□□ 1.55
TPM1-214ENST00000558544 ATF3P18847 181 aa24.73■■□□□ 1.55
TPM1-214ENST00000558544 TOM1O60784 492 aa24.72■■□□□ 1.55
TPM1-214ENST00000558544 RGPD8O14715 1765 aaPredicted RBP24.72■■□□□ 1.55
TPM1-214ENST00000558544 CADPS2Q86UW7 1296 aa24.71■■□□□ 1.55
TPM1-214ENST00000558544 HIRIP3Q9BW71 556 aaPredicted RBP24.71■■□□□ 1.55
TPM1-214ENST00000558544 USP47Q96K76 1375 aa24.69■■□□□ 1.54
TPM1-214ENST00000558544 MST1RQ04912 1400 aa24.69■■□□□ 1.54
TPM1-214ENST00000558544 ROBO1Q9Y6N7 1651 aa24.69■■□□□ 1.54
TPM1-214ENST00000558544 PIP4K2BP78356 416 aa24.67■■□□□ 1.54
TPM1-214ENST00000558544 USP32Q8NFA0 1604 aa24.66■■□□□ 1.54
TPM1-214ENST00000558544 SCAF1Q9H7N4 1312 aaKnown RBP24.66■■□□□ 1.54
TPM1-214ENST00000558544 FBXO41Q8TF61 875 aa24.65■■□□□ 1.54
TPM1-214ENST00000558544 SLAIN2Q9P270 581 aa24.65■■□□□ 1.54
TPM1-214ENST00000558544 TULP4Q9NRJ4 1543 aa24.65■■□□□ 1.54
TPM1-214ENST00000558544 C1orf167Q5SNV9 1468 aa24.63■■□□□ 1.53
TPM1-214ENST00000558544 NUTM2FA1L443 756 aa24.63■■□□□ 1.53
TPM1-214ENST00000558544 ITSN1Q15811 1721 aa24.62■■□□□ 1.53
TPM1-214ENST00000558544 ST20-MTHFSA0A0A6YYL1 179 aa24.61■■□□□ 1.53
TPM1-214ENST00000558544 WASLO00401 505 aaPredicted RBP24.61■■□□□ 1.53
TPM1-214ENST00000558544 SBNO2Q9Y2G9 1366 aa24.6■■□□□ 1.53
TPM1-214ENST00000558544 TOPAZ1Q8N9V7 1692 aa24.58■■□□□ 1.53
TPM1-214ENST00000558544 ANKARQ7Z5J8 1434 aa24.57■■□□□ 1.52
TPM1-214ENST00000558544 CDK19Q9BWU1 502 aa24.57■■□□□ 1.52
TPM1-214ENST00000558544 ATP7BP35670 1465 aa24.57■■□□□ 1.52
TPM1-214ENST00000558544 KIF1AQ12756 1690 aa24.56■■□□□ 1.52
TPM1-214ENST00000558544 NHSL1Q5SYE7 1610 aa24.56■■□□□ 1.52
TPM1-214ENST00000558544 EVC2Q86UK5 1308 aa24.55■■□□□ 1.52
TPM1-214ENST00000558544 PRR36Q9H6K5 1346 aa24.55■■□□□ 1.52
TPM1-214ENST00000558544 EIF4G2P78344 907 aaKnown RBP eCLIP24.54■■□□□ 1.52
TPM1-214ENST00000558544 BRINP3Q76B58 766 aa24.54■■□□□ 1.52
TPM1-214ENST00000558544 TESK2Q96S53 571 aa24.54■■□□□ 1.52
TPM1-214ENST00000558544 ORAI2Q96SN7 254 aa24.54■■□□□ 1.52
TPM1-214ENST00000558544 PHLPP1O60346 1717 aa24.54■■□□□ 1.52
TPM1-214ENST00000558544 HSPA5P11021 654 aaKnown RBP24.53■■□□□ 1.52
TPM1-214ENST00000558544 SRPK2P78362 688 aaKnown RBP24.53■■□□□ 1.52
TPM1-214ENST00000558544 ESCO1Q5FWF5 840 aa24.53■■□□□ 1.52
TPM1-214ENST00000558544 CABP2Q9NPB3 220 aa24.53■■□□□ 1.52
TPM1-214ENST00000558544 ZEB1P37275 1124 aaPredicted RBP24.52■■□□□ 1.52
TPM1-214ENST00000558544 AHDC1Q5TGY3 1603 aaPredicted RBP24.51■■□□□ 1.51
TPM1-214ENST00000558544 NUDT16Q96DE0 195 aaKnown RBP24.5■■□□□ 1.51
TPM1-214ENST00000558544 DISP3Q9P2K9 1392 aa24.48■■□□□ 1.51
TPM1-214ENST00000558544 COL16A1Q07092 1604 aaPredicted RBP24.47■■□□□ 1.51
TPM1-214ENST00000558544 ILDR1Q86SU0 546 aaPredicted RBP24.46■■□□□ 1.51
TPM1-214ENST00000558544 DDX17Q92841 729 aaKnown RBP24.45■■□□□ 1.5
TPM1-214ENST00000558544 PHF8Q9UPP1 1060 aa24.45■■□□□ 1.5
TPM1-214ENST00000558544 TMF1P82094 1093 aa24.44■■□□□ 1.5
TPM1-214ENST00000558544 PMFBP1Q8TBY8 1022 aa24.44■■□□□ 1.5
TPM1-214ENST00000558544 PPIP5K1Q6PFW1 1433 aa24.44■■□□□ 1.5
TPM1-214ENST00000558544 SLC24A1O60721 1099 aa24.43■■□□□ 1.5
TPM1-214ENST00000558544 HSPA1LP34931 641 aa24.43■■□□□ 1.5
TPM1-214ENST00000558544 ATAD2Q6PL18 1390 aa24.43■■□□□ 1.5
TPM1-214ENST00000558544 CCDC61Q9Y6R9 512 aa24.42■■□□□ 1.5
TPM1-214ENST00000558544 AKAP12Q02952 1782 aa24.41■■□□□ 1.5
TPM1-214ENST00000558544 FOXO3O43524 673 aa24.41■■□□□ 1.5
TPM1-214ENST00000558544 MYOM1P52179 1685 aa24.4■■□□□ 1.5
TPM1-214ENST00000558544 PXDNQ92626 1479 aa24.4■■□□□ 1.5
TPM1-214ENST00000558544 NPHP3Q7Z494 1330 aa24.4■■□□□ 1.5
TPM1-214ENST00000558544 TRPM3Q9HCF6 1732 aaPredicted RBP24.38■■□□□ 1.49
TPM1-214ENST00000558544 XPCQ01831 940 aaPredicted RBP24.38■■□□□ 1.49
TPM1-214ENST00000558544 NGDNQ8NEJ9 315 aaKnown RBP24.37■■□□□ 1.49
TPM1-214ENST00000558544 CABP1Q9NZU7 370 aa24.37■■□□□ 1.49
TPM1-214ENST00000558544 PUS7Q96PZ0 661 aaKnown RBP24.36■■□□□ 1.49
TPM1-214ENST00000558544 POLR3AO14802 1390 aaPredicted RBP24.35■■□□□ 1.49
TPM1-214ENST00000558544 ACEP12821 1306 aa24.35■■□□□ 1.49
TPM1-214ENST00000558544 SOS2Q07890 1332 aaPredicted RBP24.35■■□□□ 1.49
TPM1-214ENST00000558544 PLEKHG3A1L390 1219 aa24.35■■□□□ 1.49
TPM1-214ENST00000558544 MON2Q7Z3U7 1717 aa24.34■■□□□ 1.49
TPM1-214ENST00000558544 CDCA8Q53HL2 280 aa24.34■■□□□ 1.49
TPM1-214ENST00000558544 SHPRHQ149N8 1683 aa24.34■■□□□ 1.49
TPM1-214ENST00000558544 TMC1Q8TDI8 760 aa24.33■■□□□ 1.49
TPM1-214ENST00000558544 PSME1Q06323 249 aa24.32■■□□□ 1.48
TPM1-214ENST00000558544 KRT28Q7Z3Y7 464 aa24.32■■□□□ 1.48
TPM1-214ENST00000558544 POLR3GLQ9BT43 218 aa24.31■■□□□ 1.48
TPM1-214ENST00000558544 NRKQ7Z2Y5 1582 aa24.31■■□□□ 1.48
TPM1-214ENST00000558544 CD163L1Q9NR16 1453 aa24.3■■□□□ 1.48
TPM1-214ENST00000558544 ALS2Q96Q42 1657 aa24.3■■□□□ 1.48
TPM1-214ENST00000558544 C11orf95C9JLR9 678 aaPredicted RBP24.29■■□□□ 1.48
TPM1-214ENST00000558544 SLC12A5Q9H2X9 1139 aa24.29■■□□□ 1.48
TPM1-214ENST00000558544 NINLQ9Y2I6 1382 aa24.29■■□□□ 1.48
TPM1-214ENST00000558544 CPSF1Q10570 1443 aaKnown RBP24.28■■□□□ 1.48
TPM1-214ENST00000558544 TNS3Q68CZ2 1445 aa24.28■■□□□ 1.48
TPM1-214ENST00000558544 LRRC59Q96AG4 307 aaKnown RBP24.28■■□□□ 1.48
TPM1-214ENST00000558544 USP6P35125 1406 aa24.27■■□□□ 1.48
TPM1-214ENST00000558544 COL22A1Q8NFW1 1626 aaPredicted RBP24.26■■□□□ 1.47
TPM1-214ENST00000558544 A0A1W2PP64 1363 aa24.26■■□□□ 1.47
TPM1-214ENST00000558544 SBNO1A3KN83 1393 aa24.26■■□□□ 1.47
TPM1-214ENST00000558544 JCADQ9P266 1359 aa24.26■■□□□ 1.47
TPM1-214ENST00000558544 KIF7Q2M1P5 1343 aa24.24■■□□□ 1.47
TPM1-214ENST00000558544 KTN1Q86UP2 1357 aaKnown RBP24.24■■□□□ 1.47
TPM1-214ENST00000558544 PNPLA6Q8IY17 1366 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 339.2 ms