RNA–Protein interactions for RNA: ENST00000558321.5

CDC42BPB-202, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-202ENST00000558321 DHX57Q6P158 1386 aaKnown RBP18.07■□□□□ 0.48
CDC42BPB-202ENST00000558321 YTHDC2Q9H6S0 1430 aaKnown RBP18.06■□□□□ 0.48
CDC42BPB-202ENST00000558321 ESCO1Q5FWF5 840 aa18.06■□□□□ 0.48
CDC42BPB-202ENST00000558321 NUTM2FA1L443 756 aa18.05■□□□□ 0.48
CDC42BPB-202ENST00000558321 MYOM2P54296 1465 aa18.04■□□□□ 0.48
CDC42BPB-202ENST00000558321 POTEAQ6S8J7 498 aa18.04■□□□□ 0.48
CDC42BPB-202ENST00000558321 SIRT1Q96EB6 747 aa18.04■□□□□ 0.48
CDC42BPB-202ENST00000558321 STAC3Q96MF2 364 aa18.03■□□□□ 0.48
CDC42BPB-202ENST00000558321 TECPR2O15040 1411 aa18.03■□□□□ 0.48
CDC42BPB-202ENST00000558321 PLEKHH1Q9ULM0 1364 aa18.03■□□□□ 0.48
CDC42BPB-202ENST00000558321 NRXN1Q9ULB1 1477 aa18.02■□□□□ 0.48
CDC42BPB-202ENST00000558321 POGKQ9P215 609 aa18.02■□□□□ 0.48
CDC42BPB-202ENST00000558321 SAFB2Q14151 953 aaKnown RBP eCLIP18.01■□□□□ 0.47
CDC42BPB-202ENST00000558321 PRAM1Q96QH2 718 aa18■□□□□ 0.47
CDC42BPB-202ENST00000558321 LRP6O75581 1613 aa17.99■□□□□ 0.47
CDC42BPB-202ENST00000558321 FOXO3O43524 673 aa17.99■□□□□ 0.47
CDC42BPB-202ENST00000558321 TRAK1Q9UPV9 953 aa17.99■□□□□ 0.47
CDC42BPB-202ENST00000558321 SHPRHQ149N8 1683 aa17.99■□□□□ 0.47
CDC42BPB-202ENST00000558321 NHSL1Q5SYE7 1610 aa17.98■□□□□ 0.47
CDC42BPB-202ENST00000558321 ZNF772Q68DY9 489 aaPredicted RBP17.98■□□□□ 0.47
CDC42BPB-202ENST00000558321 CDC42BPGQ6DT37 1551 aa17.98■□□□□ 0.47
CDC42BPB-202ENST00000558321 SOS2Q07890 1332 aaPredicted RBP17.98■□□□□ 0.47
CDC42BPB-202ENST00000558321 NPHP3Q7Z494 1330 aa17.98■□□□□ 0.47
CDC42BPB-202ENST00000558321 PNPLA6Q8IY17 1366 aa17.97■□□□□ 0.47
CDC42BPB-202ENST00000558321 LAMC1P11047 1609 aa17.97■□□□□ 0.47
CDC42BPB-202ENST00000558321 XPCQ01831 940 aaPredicted RBP17.96■□□□□ 0.47
CDC42BPB-202ENST00000558321 KNDC1Q76NI1 1749 aa17.95■□□□□ 0.46
CDC42BPB-202ENST00000558321 C8orf37Q96NL8 207 aa17.95■□□□□ 0.46
CDC42BPB-202ENST00000558321 ADAMTS2O95450 1211 aa17.94■□□□□ 0.46
CDC42BPB-202ENST00000558321 NGLY1Q96IV0 654 aa17.92■□□□□ 0.46
CDC42BPB-202ENST00000558321 AFF2P51816 1311 aa17.92■□□□□ 0.46
CDC42BPB-202ENST00000558321 HIRIP3Q9BW71 556 aaPredicted RBP17.91■□□□□ 0.46
CDC42BPB-202ENST00000558321 PHF8Q9UPP1 1060 aa17.91■□□□□ 0.46
CDC42BPB-202ENST00000558321 MINK1Q8N4C8 1332 aaPredicted RBP17.91■□□□□ 0.46
CDC42BPB-202ENST00000558321 RXRBP28702 533 aa17.9■□□□□ 0.46
CDC42BPB-202ENST00000558321 DLC1Q96QB1 1528 aa17.89■□□□□ 0.45
CDC42BPB-202ENST00000558321 ADGRB1O14514 1584 aa17.89■□□□□ 0.45
CDC42BPB-202ENST00000558321 KRT28Q7Z3Y7 464 aa17.89■□□□□ 0.45
CDC42BPB-202ENST00000558321 PSME1Q06323 249 aa17.88■□□□□ 0.45
CDC42BPB-202ENST00000558321 FMN2Q9NZ56 1722 aa17.87■□□□□ 0.45
CDC42BPB-202ENST00000558321 NEUROD1Q13562 356 aa17.87■□□□□ 0.45
CDC42BPB-202ENST00000558321 QTRT2Q9H974 415 aaKnown RBP17.87■□□□□ 0.45
CDC42BPB-202ENST00000558321 PMFBP1Q8TBY8 1022 aa17.86■□□□□ 0.45
CDC42BPB-202ENST00000558321 PXDNQ92626 1479 aa17.86■□□□□ 0.45
CDC42BPB-202ENST00000558321 LMOD2Q6P5Q4 547 aa17.85■□□□□ 0.45
CDC42BPB-202ENST00000558321 SIN3AQ96ST3 1273 aa17.85■□□□□ 0.45
CDC42BPB-202ENST00000558321 SPATA31A3Q5VYP0 1347 aa17.84■□□□□ 0.45
CDC42BPB-202ENST00000558321 WASLO00401 505 aaPredicted RBP17.84■□□□□ 0.45
CDC42BPB-202ENST00000558321 EIF3AQ14152 1382 aaKnown RBP17.83■□□□□ 0.45
CDC42BPB-202ENST00000558321 PLEKHG5O94827 1062 aa17.83■□□□□ 0.44
CDC42BPB-202ENST00000558321 HAP1P54257 671 aaPredicted RBP17.83■□□□□ 0.44
CDC42BPB-202ENST00000558321 NBPF1Q3BBV0 1214 aa17.83■□□□□ 0.44
CDC42BPB-202ENST00000558321 L3MBTL2Q969R5 705 aa17.83■□□□□ 0.44
CDC42BPB-202ENST00000558321 USP21Q9UK80 565 aa17.83■□□□□ 0.44
CDC42BPB-202ENST00000558321 ANKARQ7Z5J8 1434 aa17.82■□□□□ 0.44
CDC42BPB-202ENST00000558321 KIF1AQ12756 1690 aa17.82■□□□□ 0.44
CDC42BPB-202ENST00000558321 RBM6P78332 1123 aaKnown RBP17.81■□□□□ 0.44
CDC42BPB-202ENST00000558321 FNBP4Q8N3X1 1017 aaPredicted RBP17.79■□□□□ 0.44
CDC42BPB-202ENST00000558321 NGDNQ8NEJ9 315 aaKnown RBP17.79■□□□□ 0.44
CDC42BPB-202ENST00000558321 RGPD8O14715 1765 aaPredicted RBP17.79■□□□□ 0.44
CDC42BPB-202ENST00000558321 GPRASP1Q5JY77 1395 aa17.79■□□□□ 0.44
CDC42BPB-202ENST00000558321 TRIM26Q12899 539 aaPredicted RBP17.78■□□□□ 0.44
CDC42BPB-202ENST00000558321 CDK19Q9BWU1 502 aa17.78■□□□□ 0.44
CDC42BPB-202ENST00000558321 TRPC5Q9UL62 973 aaPredicted RBP17.78■□□□□ 0.44
CDC42BPB-202ENST00000558321 COL22A1Q8NFW1 1626 aaPredicted RBP17.78■□□□□ 0.44
CDC42BPB-202ENST00000558321 ADGRB2O60241 1585 aa17.78■□□□□ 0.44
CDC42BPB-202ENST00000558321 PRR36Q9H6K5 1346 aa17.77■□□□□ 0.44
CDC42BPB-202ENST00000558321 CABLES1Q8TDN4 633 aa17.77■□□□□ 0.44
CDC42BPB-202ENST00000558321 NUDT16Q96DE0 195 aaKnown RBP17.77■□□□□ 0.44
CDC42BPB-202ENST00000558321 SBNO1A3KN83 1393 aa17.77■□□□□ 0.43
CDC42BPB-202ENST00000558321 TNS3Q68CZ2 1445 aa17.76■□□□□ 0.43
CDC42BPB-202ENST00000558321 PAK3O75914 559 aaPredicted RBP17.75■□□□□ 0.43
CDC42BPB-202ENST00000558321 TULP4Q9NRJ4 1543 aa17.75■□□□□ 0.43
CDC42BPB-202ENST00000558321 ARHGEF10O15013 1369 aa17.75■□□□□ 0.43
CDC42BPB-202ENST00000558321 USP32Q8NFA0 1604 aa17.74■□□□□ 0.43
CDC42BPB-202ENST00000558321 KIAA1210Q9ULL0 1709 aa17.74■□□□□ 0.43
CDC42BPB-202ENST00000558321 CDK12Q9NYV4 1490 aaPredicted RBP17.73■□□□□ 0.43
CDC42BPB-202ENST00000558321 CENPJQ9HC77 1338 aaPredicted RBP17.72■□□□□ 0.43
CDC42BPB-202ENST00000558321 ARHGEF28Q8N1W1 1705 aaKnown RBP17.72■□□□□ 0.43
CDC42BPB-202ENST00000558321 SRPK2P78362 688 aaKnown RBP17.71■□□□□ 0.43
CDC42BPB-202ENST00000558321 CCDC61Q9Y6R9 512 aa17.71■□□□□ 0.43
CDC42BPB-202ENST00000558321 UNC5CLQ8IV45 518 aa17.7■□□□□ 0.42
CDC42BPB-202ENST00000558321 UPF1Q92900 1129 aaKnown RBP eCLIP17.69■□□□□ 0.42
CDC42BPB-202ENST00000558321 ATRNO75882 1429 aa17.69■□□□□ 0.42
CDC42BPB-202ENST00000558321 BCL9LQ86UU0 1499 aa17.69■□□□□ 0.42
CDC42BPB-202ENST00000558321 RGS12O14924 1447 aa17.68■□□□□ 0.42
CDC42BPB-202ENST00000558321 GJD4Q96KN9 370 aaPredicted RBP17.68■□□□□ 0.42
CDC42BPB-202ENST00000558321 ROCK2O75116 1388 aaKnown RBP17.67■□□□□ 0.42
CDC42BPB-202ENST00000558321 NBPF8Q3BBV2 869 aa17.67■□□□□ 0.42
CDC42BPB-202ENST00000558321 CABP2Q9NPB3 220 aa17.67■□□□□ 0.42
CDC42BPB-202ENST00000558321 CCDC9Q9Y3X0 531 aaKnown RBP17.67■□□□□ 0.42
CDC42BPB-202ENST00000558321 ATP7BP35670 1465 aa17.67■□□□□ 0.42
CDC42BPB-202ENST00000558321 ACEP12821 1306 aa17.67■□□□□ 0.42
CDC42BPB-202ENST00000558321 FAM83GA6ND36 823 aa17.66■□□□□ 0.42
CDC42BPB-202ENST00000558321 MARF1Q9Y4F3 1742 aaKnown RBP17.65■□□□□ 0.42
CDC42BPB-202ENST00000558321 PLEKHG3A1L390 1219 aa17.65■□□□□ 0.42
CDC42BPB-202ENST00000558321 TONSLQ96HA7 1378 aa17.65■□□□□ 0.42
CDC42BPB-202ENST00000558321 SLIT2O94813 1529 aa17.63■□□□□ 0.41
CDC42BPB-202ENST00000558321 NUTM2GQ5VZR2 741 aa17.63■□□□□ 0.41
CDC42BPB-202ENST00000558321 EVC2Q86UK5 1308 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms