RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 CENPJQ9HC77 1338 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-248ENST00000558190 G3BP1Q13283 466 aaKnown RBP eCLIP4.43□□□□□ -1.7
ATXN3-248ENST00000558190 NCBP3Q53F19 620 aaKnown RBP4.43□□□□□ -1.7
ATXN3-248ENST00000558190 LOC102724159A0A0B4J2E5 919 aa4.43□□□□□ -1.7
ATXN3-248ENST00000558190 BRPF1P55201 1214 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-248ENST00000558190 PWP2Q15269 919 aaKnown RBP4.43□□□□□ -1.7
ATXN3-248ENST00000558190 RAI14Q9P0K7 980 aa4.43□□□□□ -1.7
ATXN3-248ENST00000558190 PANK2Q9BZ23 570 aa4.43□□□□□ -1.7
ATXN3-248ENST00000558190 MAPK8IP3Q9UPT6 1336 aa4.43□□□□□ -1.7
ATXN3-248ENST00000558190 AXDND1Q5T1B0 1012 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-248ENST00000558190 CCP110O43303 1012 aa4.42□□□□□ -1.7
ATXN3-248ENST00000558190 RUFY2Q8WXA3 655 aa4.42□□□□□ -1.7
ATXN3-248ENST00000558190 NLRP13Q86W25 1043 aa4.42□□□□□ -1.7
ATXN3-248ENST00000558190 CPLX3Q8WVH0 158 aa4.42□□□□□ -1.7
ATXN3-248ENST00000558190 FEZ1Q99689 392 aa4.42□□□□□ -1.7
ATXN3-248ENST00000558190 CCDC102AQ96A19 550 aa4.42□□□□□ -1.7
ATXN3-248ENST00000558190 TMX1Q9H3N1 280 aa4.42□□□□□ -1.7
ATXN3-248ENST00000558190 GOLGA6L10A0A0M3HER8 536 aa4.42□□□□□ -1.7
ATXN3-248ENST00000558190 GOLGA6L10A6NI86 522 aa4.42□□□□□ -1.7
ATXN3-248ENST00000558190 AAMPQ13685 434 aa4.42□□□□□ -1.7
ATXN3-248ENST00000558190 FILIP1Q7Z7B0 1213 aa4.42□□□□□ -1.7
ATXN3-248ENST00000558190 FOSBP53539 338 aa4.42□□□□□ -1.7
ATXN3-248ENST00000558190 RIPK4P57078 832 aa4.42□□□□□ -1.7
ATXN3-248ENST00000558190 PDE3AQ14432 1141 aa4.42□□□□□ -1.7
ATXN3-248ENST00000558190 FAM107BQ9H098 131 aa4.42□□□□□ -1.7
ATXN3-248ENST00000558190 ZNF396Q96N95 335 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-248ENST00000558190 CCDC191Q8NCU4 936 aa4.42□□□□□ -1.7
ATXN3-248ENST00000558190 PRIMPOLQ96LW4 560 aa4.42□□□□□ -1.7
ATXN3-248ENST00000558190 CCDC91Q7Z6B0 441 aa4.41□□□□□ -1.7
ATXN3-248ENST00000558190 DCTN1Q14203 1278 aa4.41□□□□□ -1.7
ATXN3-248ENST00000558190 BICD2Q8TD16 824 aa4.41□□□□□ -1.7
ATXN3-248ENST00000558190 CAGE1Q8TC20 777 aa4.41□□□□□ -1.7
ATXN3-248ENST00000558190 CEP89Q96ST8 783 aa4.41□□□□□ -1.7
ATXN3-248ENST00000558190 BCCIPQ9P287 314 aaKnown RBP eCLIP4.41□□□□□ -1.7
ATXN3-248ENST00000558190 SRPK2P78362 688 aaKnown RBP4.41□□□□□ -1.7
ATXN3-248ENST00000558190 SYCE3A1L190 88 aa4.41□□□□□ -1.7
ATXN3-248ENST00000558190 USP8P40818 1118 aa4.41□□□□□ -1.7
ATXN3-248ENST00000558190 CEP57Q86XR8 500 aa4.41□□□□□ -1.7
ATXN3-248ENST00000558190 ZNHIT6Q9NWK9 470 aaKnown RBP4.41□□□□□ -1.7
ATXN3-248ENST00000558190 SAFB2Q14151 953 aaKnown RBP eCLIP4.41□□□□□ -1.7
ATXN3-248ENST00000558190 A0A1B0GUL7 405 aa4.41□□□□□ -1.7
ATXN3-248ENST00000558190 LMAN1P49257 510 aa4.41□□□□□ -1.7
ATXN3-248ENST00000558190 PRIM1P49642 420 aaKnown RBP4.41□□□□□ -1.7
ATXN3-248ENST00000558190 AKAP17AQ02040 695 aaKnown RBP4.41□□□□□ -1.7
ATXN3-248ENST00000558190 CEP135Q66GS9 1140 aa4.41□□□□□ -1.7
ATXN3-248ENST00000558190 LMOD2Q6P5Q4 547 aa4.41□□□□□ -1.7
ATXN3-248ENST00000558190 DDX11Q96FC9 970 aa4.41□□□□□ -1.7
ATXN3-248ENST00000558190 CCDC73Q6ZRK6 1079 aa4.41□□□□□ -1.7
ATXN3-248ENST00000558190 TRIM34Q9BYJ4 488 aa4.41□□□□□ -1.7
ATXN3-248ENST00000558190 SERPINC1P01008 464 aa4.41□□□□□ -1.7
ATXN3-248ENST00000558190 CIZ1Q9ULV3 898 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-248ENST00000558190 NBPF1Q3BBV0 1214 aa4.41□□□□□ -1.7
ATXN3-248ENST00000558190 LRRFIP2Q9Y608 721 aaKnown RBP4.41□□□□□ -1.7
ATXN3-248ENST00000558190 TDO2P48775 406 aa4.41□□□□□ -1.7
ATXN3-248ENST00000558190 SKILP12757 684 aa4.41□□□□□ -1.7
ATXN3-248ENST00000558190 GBP2P32456 591 aaPredicted RBP4.4□□□□□ -1.7
ATXN3-248ENST00000558190 JAKMIP3Q5VZ66 844 aa4.4□□□□□ -1.7
ATXN3-248ENST00000558190 RBM28Q9NW13 759 aaKnown RBP4.4□□□□□ -1.7
ATXN3-248ENST00000558190 HS1BP3Q53T59 392 aa4.4□□□□□ -1.7
ATXN3-248ENST00000558190 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.4□□□□□ -1.7
ATXN3-248ENST00000558190 MBD3O95983 291 aa4.4□□□□□ -1.7
ATXN3-248ENST00000558190 RBM27Q9P2N5 1060 aaKnown RBP4.4□□□□□ -1.7
ATXN3-248ENST00000558190 ANKRD20A12PQ8NF67 263 aa4.4□□□□□ -1.7
ATXN3-248ENST00000558190 RBSNQ9H1K0 784 aa4.4□□□□□ -1.7
ATXN3-248ENST00000558190 TNMDQ9H2S6 317 aa4.4□□□□□ -1.7
ATXN3-248ENST00000558190 LARP6Q9BRS8 491 aaKnown RBP4.4□□□□□ -1.71
ATXN3-248ENST00000558190 PDRG1Q9NUG6 133 aa4.4□□□□□ -1.71
ATXN3-248ENST00000558190 RNF20Q5VTR2 975 aa4.4□□□□□ -1.71
ATXN3-248ENST00000558190 VPS37CA5D8V6 355 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-248ENST00000558190 LRRCC1Q9C099 1032 aa4.4□□□□□ -1.71
ATXN3-248ENST00000558190 WASHC2CQ9Y4E1 1318 aa4.4□□□□□ -1.71
ATXN3-248ENST00000558190 KIF2AO00139 706 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-248ENST00000558190 NOL7Q9UMY1 257 aaKnown RBP4.4□□□□□ -1.71
ATXN3-248ENST00000558190 ATP2C2O75185 946 aa4.4□□□□□ -1.71
ATXN3-248ENST00000558190 ERLIN1O75477 346 aa4.4□□□□□ -1.71
ATXN3-248ENST00000558190 SSFA2P28290 1259 aa4.4□□□□□ -1.71
ATXN3-248ENST00000558190 A0A0G2JS52 829 aa4.4□□□□□ -1.71
ATXN3-248ENST00000558190 SOX12O15370 315 aa4.4□□□□□ -1.71
ATXN3-248ENST00000558190 C20orf194Q5TEA3 1177 aa4.4□□□□□ -1.71
ATXN3-248ENST00000558190 CCDC186Q7Z3E2 898 aa4.4□□□□□ -1.71
ATXN3-248ENST00000558190 RASSF8Q8NHQ8 419 aa4.4□□□□□ -1.71
ATXN3-248ENST00000558190 ANKRD62A6NC57 917 aa4.4□□□□□ -1.71
ATXN3-248ENST00000558190 PSMA5P28066 241 aa4.4□□□□□ -1.71
ATXN3-248ENST00000558190 C10orf67Q8IYJ2 551 aa4.4□□□□□ -1.71
ATXN3-248ENST00000558190 OTUD6BQ8N6M0 293 aa4.4□□□□□ -1.71
ATXN3-248ENST00000558190 CPLX1O14810 134 aa4.4□□□□□ -1.71
ATXN3-248ENST00000558190 KIF4BQ2VIQ3 1234 aa4.4□□□□□ -1.71
ATXN3-248ENST00000558190 NGEFQ8N5V2 710 aa4.39□□□□□ -1.71
ATXN3-248ENST00000558190 ESF1Q9H501 851 aaKnown RBP4.39□□□□□ -1.71
ATXN3-248ENST00000558190 CDC45O75419 566 aa4.39□□□□□ -1.71
ATXN3-248ENST00000558190 TXLNBQ8N3L3 684 aa4.39□□□□□ -1.71
ATXN3-248ENST00000558190 IPO7O95373 1038 aaKnown RBP4.39□□□□□ -1.71
ATXN3-248ENST00000558190 USP48Q86UV5 1035 aa4.39□□□□□ -1.71
ATXN3-248ENST00000558190 EIF2S2P20042 333 aaKnown RBP4.39□□□□□ -1.71
ATXN3-248ENST00000558190 GNG11P61952 73 aa4.39□□□□□ -1.71
ATXN3-248ENST00000558190 KRT222Q8N1A0 295 aa4.39□□□□□ -1.71
ATXN3-248ENST00000558190 CLASRPQ8N2M8 674 aaKnown RBP4.39□□□□□ -1.71
ATXN3-248ENST00000558190 CGNL1Q0VF96 1302 aa4.39□□□□□ -1.71
ATXN3-248ENST00000558190 IFIT2P09913 472 aaKnown RBP4.39□□□□□ -1.71
ATXN3-248ENST00000558190 MAP2K1Q02750 393 aaPredicted RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms