RNA–Protein interactions for RNA: ENST00000557827.5

ZEB1-210, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 877 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-210ENST00000557827 LRRN4Q8WUT4 740 aa11.13□□□□□ -0.63
ZEB1-210ENST00000557827 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.13□□□□□ -0.63
ZEB1-210ENST00000557827 PCDHGC3Q9UN70 934 aa11.13□□□□□ -0.63
ZEB1-210ENST00000557827 GNEQ9Y223 722 aaKnown RBP11.13□□□□□ -0.63
ZEB1-210ENST00000557827 SOX11P35716 441 aa11.12□□□□□ -0.63
ZEB1-210ENST00000557827 MYT1LQ9UL68 1186 aa11.12□□□□□ -0.63
ZEB1-210ENST00000557827 TATDN2Q93075 761 aa11.11□□□□□ -0.63
ZEB1-210ENST00000557827 MAFBQ9Y5Q3 323 aaPredicted RBP11.11□□□□□ -0.63
ZEB1-210ENST00000557827 GCGRP47871 477 aa11.1□□□□□ -0.63
ZEB1-210ENST00000557827 SEMA3FQ13275 785 aa11.1□□□□□ -0.63
ZEB1-210ENST00000557827 HELBQ8NG08 1087 aaPredicted RBP11.1□□□□□ -0.63
ZEB1-210ENST00000557827 EPS8L1Q8TE68 723 aa11.1□□□□□ -0.63
ZEB1-210ENST00000557827 PNMA3Q9UL41 463 aa11.1□□□□□ -0.63
ZEB1-210ENST00000557827 POTEJP0CG39 1038 aa11.09□□□□□ -0.63
ZEB1-210ENST00000557827 TBC1D9Q6ZT07 1266 aa11.09□□□□□ -0.63
ZEB1-210ENST00000557827 TSC1Q92574 1164 aa11.09□□□□□ -0.63
ZEB1-210ENST00000557827 UNCXA6NJT0 531 aa11.08□□□□□ -0.64
ZEB1-210ENST00000557827 NBPF26B4DH59 902 aa11.08□□□□□ -0.64
ZEB1-210ENST00000557827 NUDT7P0C024 238 aa11.08□□□□□ -0.64
ZEB1-210ENST00000557827 GUCA2AQ02747 115 aa11.08□□□□□ -0.64
ZEB1-210ENST00000557827 MTMR2Q13614 643 aa11.07□□□□□ -0.64
ZEB1-210ENST00000557827 B4GALNT3Q6L9W6 998 aa11.07□□□□□ -0.64
ZEB1-210ENST00000557827 KHSRPQ92945 711 aaKnown RBP eCLIP11.06□□□□□ -0.646e-7■■■■□ 21.8
ZEB1-210ENST00000557827 HLA-CQ95604 372 aa11.06□□□□□ -0.64
ZEB1-210ENST00000557827 PSDA5PKW4 1024 aaPredicted RBP11.05□□□□□ -0.64
ZEB1-210ENST00000557827 CFAP99D6REC4 459 aa11.05□□□□□ -0.64
ZEB1-210ENST00000557827 RIMBP2O15034 1052 aa11.05□□□□□ -0.64
ZEB1-210ENST00000557827 RSPH4AQ5TD94 716 aa11.05□□□□□ -0.64
ZEB1-210ENST00000557827 PACS2Q86VP3 889 aa11.05□□□□□ -0.64
ZEB1-210ENST00000557827 RBM47A0AV96 593 aaKnown RBP11.04□□□□□ -0.64
ZEB1-210ENST00000557827 ATP9BO43861 1147 aa11.04□□□□□ -0.64
ZEB1-210ENST00000557827 TRIM6-TRIM34B2RNG4 842 aa11.03□□□□□ -0.64
ZEB1-210ENST00000557827 PPP1R3GB7ZBB8 358 aa11.03□□□□□ -0.64
ZEB1-210ENST00000557827 ELOAQ14241 798 aaKnown RBP11.03□□□□□ -0.64
ZEB1-210ENST00000557827 ARSIQ5FYB1 569 aa11.03□□□□□ -0.64
ZEB1-210ENST00000557827 KANK4Q5T7N3 995 aaPredicted RBP11.03□□□□□ -0.64
ZEB1-210ENST00000557827 CCER1Q8TC90 406 aaPredicted RBP11.03□□□□□ -0.64
ZEB1-210ENST00000557827 ZSWIM6Q9HCJ5 1215 aa11.03□□□□□ -0.64
ZEB1-210ENST00000557827 USP35Q9P2H5 1018 aa11.03□□□□□ -0.64
ZEB1-210ENST00000557827 TXNDC2Q86VQ3 553 aa11.02□□□□□ -0.65
ZEB1-210ENST00000557827 BCL2L12Q9HB09 334 aa11.02□□□□□ -0.65
ZEB1-210ENST00000557827 SMAPO00193 183 aa11.01□□□□□ -0.65
ZEB1-210ENST00000557827 NR6A1Q15406 480 aa11.01□□□□□ -0.65
ZEB1-210ENST00000557827 DOK7Q18PE1 504 aa11.01□□□□□ -0.65
ZEB1-210ENST00000557827 SLF2Q8IX21 1173 aa11.01□□□□□ -0.65
ZEB1-210ENST00000557827 PNMA1Q8ND90 353 aa11.01□□□□□ -0.65
ZEB1-210ENST00000557827 EIF4G2P78344 907 aaKnown RBP eCLIP11□□□□□ -0.65
ZEB1-210ENST00000557827 TMEM164Q5U3C3 297 aa11□□□□□ -0.65
ZEB1-210ENST00000557827 IGSF5Q9NSI5 407 aa11□□□□□ -0.65
ZEB1-210ENST00000557827 C6orf229H3BNL8 230 aa10.99□□□□□ -0.65
ZEB1-210ENST00000557827 SLC10A3P09131 477 aa10.99□□□□□ -0.65
ZEB1-210ENST00000557827 PPP4R3BQ5MIZ7 849 aa10.99□□□□□ -0.65
ZEB1-210ENST00000557827 ZMIZ1Q9ULJ6 1067 aa10.99□□□□□ -0.65
ZEB1-210ENST00000557827 PTPREP23469 700 aa10.98□□□□□ -0.65
ZEB1-210ENST00000557827 PHLDB3Q6NSJ2 640 aa10.98□□□□□ -0.65
ZEB1-210ENST00000557827 STK32AQ8WU08 396 aa10.97□□□□□ -0.65
ZEB1-210ENST00000557827 LHX6Q9UPM6 363 aa10.96□□□□□ -0.65
ZEB1-210ENST00000557827 GPR153Q6NV75 609 aa10.95□□□□□ -0.66
ZEB1-210ENST00000557827 DNAJC14Q6Y2X3 702 aaPredicted RBP10.95□□□□□ -0.66
ZEB1-210ENST00000557827 NOVA2Q9UNW9 492 aaKnown RBP10.95□□□□□ -0.66
ZEB1-210ENST00000557827 PER1O15534 1290 aaPredicted RBP10.94□□□□□ -0.66
ZEB1-210ENST00000557827 ERCC3P19447 782 aa10.94□□□□□ -0.66
ZEB1-210ENST00000557827 ARID4AP29374 1257 aaPredicted RBP10.94□□□□□ -0.66
ZEB1-210ENST00000557827 PIK3CDO00329 1044 aa10.93□□□□□ -0.66
ZEB1-210ENST00000557827 GRIPAP1Q4V328 841 aa10.93□□□□□ -0.66
ZEB1-210ENST00000557827 KIAA1522Q9P206 1035 aaPredicted RBP10.93□□□□□ -0.66
ZEB1-210ENST00000557827 SSFA2P28290 1259 aa10.92□□□□□ -0.66
ZEB1-210ENST00000557827 NR1H3Q13133 447 aa10.92□□□□□ -0.66
ZEB1-210ENST00000557827 NFATC2IPQ8NCF5 419 aa10.92□□□□□ -0.66
ZEB1-210ENST00000557827 SYMPKQ92797 1274 aaKnown RBP10.92□□□□□ -0.66
ZEB1-210ENST00000557827 MRRFQ96E11 262 aaKnown RBP10.92□□□□□ -0.66
ZEB1-210ENST00000557827 HOXB3P14651 431 aaPredicted RBP10.91□□□□□ -0.66
ZEB1-210ENST00000557827 PROX2Q3B8N5 592 aa10.91□□□□□ -0.66
ZEB1-210ENST00000557827 SWT1Q5T5J6 900 aaKnown RBP10.91□□□□□ -0.66
ZEB1-210ENST00000557827 USP17L3A6NCW0 530 aa10.9□□□□□ -0.66
ZEB1-210ENST00000557827 USP17L4A6NCW7 530 aa10.9□□□□□ -0.66
ZEB1-210ENST00000557827 FUT2Q10981 343 aa10.9□□□□□ -0.66
ZEB1-210ENST00000557827 USP17L2Q6R6M4 530 aa10.9□□□□□ -0.66
ZEB1-210ENST00000557827 USP17L1Q7RTZ2 530 aa10.9□□□□□ -0.66
ZEB1-210ENST00000557827 SLC4A3P48751 1232 aa10.89□□□□□ -0.67
ZEB1-210ENST00000557827 SIRT1Q96EB6 747 aa10.89□□□□□ -0.67
ZEB1-210ENST00000557827 KCNH8Q96L42 1107 aa10.89□□□□□ -0.67
ZEB1-210ENST00000557827 SLAIN2Q9P270 581 aa10.89□□□□□ -0.67
ZEB1-210ENST00000557827 SNPHO15079 494 aa10.88□□□□□ -0.67
ZEB1-210ENST00000557827 SKIP12755 728 aa10.88□□□□□ -0.67
ZEB1-210ENST00000557827 NOM1Q5C9Z4 860 aaKnown RBP10.88□□□□□ -0.67
ZEB1-210ENST00000557827 PLEKHM2Q8IWE5 1019 aa10.88□□□□□ -0.67
ZEB1-210ENST00000557827 SOWAHDA6NJG2 315 aa10.87□□□□□ -0.67
ZEB1-210ENST00000557827 FAM196BA6NMK8 535 aa10.87□□□□□ -0.67
ZEB1-210ENST00000557827 FBXO45P0C2W1 286 aa10.87□□□□□ -0.67
ZEB1-210ENST00000557827 ZNF16P17020 682 aaPredicted RBP10.87□□□□□ -0.67
ZEB1-210ENST00000557827 KIAA1468Q9P260 1216 aa10.87□□□□□ -0.67
ZEB1-210ENST00000557827 USP17L5A8MUK1 530 aa10.86□□□□□ -0.67
ZEB1-210ENST00000557827 HMGB1P09429 215 aaKnown RBP10.86□□□□□ -0.67
ZEB1-210ENST00000557827 CRTC2Q53ET0 693 aaPredicted RBP10.86□□□□□ -0.67
ZEB1-210ENST00000557827 ZBBXA8MT70 800 aa10.85□□□□□ -0.67
ZEB1-210ENST00000557827 ATP6V1AP38606 617 aa10.85□□□□□ -0.67
ZEB1-210ENST00000557827 DEPDC4Q8N2C3 294 aa10.85□□□□□ -0.67
ZEB1-210ENST00000557827 BCL2L13Q9BXK5 485 aa10.85□□□□□ -0.67
ZEB1-210ENST00000557827 MKRN1Q9UHC7 482 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms