RNA–Protein interactions for RNA: ENST00000557768.1

HNRNPC-233, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-233ENST00000557768 SLC10A3P09131 477 aa9.66□□□□□ -0.86
HNRNPC-233ENST00000557768 MDM2Q00987 491 aaPredicted RBP9.65□□□□□ -0.86
HNRNPC-233ENST00000557768 RDH13Q8NBN7 331 aa9.65□□□□□ -0.86
HNRNPC-233ENST00000557768 KIF13AQ9H1H9 1805 aa9.65□□□□□ -0.86
HNRNPC-233ENST00000557768 TOP2BQ02880 1626 aa9.64□□□□□ -0.87
HNRNPC-233ENST00000557768 SHROOM2Q13796 1616 aa9.64□□□□□ -0.87
HNRNPC-233ENST00000557768 SUPT5HO00267 1087 aaKnown RBP9.64□□□□□ -0.87
HNRNPC-233ENST00000557768 CFHP08603 1231 aa9.64□□□□□ -0.87
HNRNPC-233ENST00000557768 RSPH4AQ5TD94 716 aa9.64□□□□□ -0.87
HNRNPC-233ENST00000557768 SLC24A3Q9HC58 644 aa9.64□□□□□ -0.87
HNRNPC-233ENST00000557768 KMT5BQ4FZB7 885 aa9.63□□□□□ -0.87
HNRNPC-233ENST00000557768 WRNQ14191 1432 aaPredicted RBP eCLIP9.63□□□□□ -0.87
HNRNPC-233ENST00000557768 ITGBL1O95965 494 aaPredicted RBP9.62□□□□□ -0.87
HNRNPC-233ENST00000557768 COPS2P61201 443 aa9.62□□□□□ -0.87
HNRNPC-233ENST00000557768 KCNC4Q03721 635 aa9.62□□□□□ -0.87
HNRNPC-233ENST00000557768 TMEM132AQ24JP5 1023 aa9.62□□□□□ -0.87
HNRNPC-233ENST00000557768 ERICH6Q7L0X2 663 aa9.62□□□□□ -0.87
HNRNPC-233ENST00000557768 MTRQ99707 1265 aa9.62□□□□□ -0.87
HNRNPC-233ENST00000557768 PRR14Q9BWN1 585 aa9.62□□□□□ -0.87
HNRNPC-233ENST00000557768 TJAP1Q5JTD0 557 aa9.61□□□□□ -0.87
HNRNPC-233ENST00000557768 SULF1Q8IWU6 871 aa9.61□□□□□ -0.87
HNRNPC-233ENST00000557768 PCDHB3Q9Y5E6 796 aa9.61□□□□□ -0.87
HNRNPC-233ENST00000557768 NUP160Q12769 1436 aa9.61□□□□□ -0.87
HNRNPC-233ENST00000557768 FHAD1B1AJZ9 1412 aa9.59□□□□□ -0.87
HNRNPC-233ENST00000557768 IL21Q9HBE4 155 aa9.59□□□□□ -0.87
HNRNPC-233ENST00000557768 ERICH3Q5RHP9 1530 aa9.58□□□□□ -0.88
HNRNPC-233ENST00000557768 ACTN4O43707 911 aaKnown RBP9.58□□□□□ -0.88
HNRNPC-233ENST00000557768 CLCN1P35523 988 aa9.58□□□□□ -0.88
HNRNPC-233ENST00000557768 BLOC1S3Q6QNY0 202 aa9.58□□□□□ -0.88
HNRNPC-233ENST00000557768 ZNF516Q92618 1163 aa9.58□□□□□ -0.88
HNRNPC-233ENST00000557768 TRIM66O15016 1216 aa9.57□□□□□ -0.88
HNRNPC-233ENST00000557768 AK7Q96M32 723 aa9.57□□□□□ -0.88
HNRNPC-233ENST00000557768 GPCPD1Q9NPB8 672 aa9.57□□□□□ -0.88
HNRNPC-233ENST00000557768 TTLL12Q14166 644 aaPredicted RBP9.56□□□□□ -0.88
HNRNPC-233ENST00000557768 IFFO2Q5TF58 517 aa9.56□□□□□ -0.88
HNRNPC-233ENST00000557768 PUS10Q3MIT2 529 aaKnown RBP9.55□□□□□ -0.88
HNRNPC-233ENST00000557768 REPIN1Q9BWE0 567 aaKnown RBP9.55□□□□□ -0.88
HNRNPC-233ENST00000557768 RUSC2Q8N2Y8 1516 aa9.55□□□□□ -0.88
HNRNPC-233ENST00000557768 PRG4Q92954 1404 aaPredicted RBP9.55□□□□□ -0.88
HNRNPC-233ENST00000557768 GCGRP47871 477 aa9.54□□□□□ -0.88
HNRNPC-233ENST00000557768 AMHR2Q16671 573 aa9.54□□□□□ -0.88
HNRNPC-233ENST00000557768 TMUB1Q9BVT8 246 aa9.54□□□□□ -0.88
HNRNPC-233ENST00000557768 A0A0G2JS52 829 aa9.53□□□□□ -0.88
HNRNPC-233ENST00000557768 CD46P15529 392 aa9.53□□□□□ -0.88
HNRNPC-233ENST00000557768 FUT2Q10981 343 aa9.53□□□□□ -0.88
HNRNPC-233ENST00000557768 NKX2-3Q8TAU0 364 aa9.53□□□□□ -0.88
HNRNPC-233ENST00000557768 FAM217BQ9NTX9 383 aaPredicted RBP9.53□□□□□ -0.88
HNRNPC-233ENST00000557768 TSPOAP1O95153 1857 aa9.53□□□□□ -0.88
HNRNPC-233ENST00000557768 ZPR1O75312 459 aa9.52□□□□□ -0.89
HNRNPC-233ENST00000557768 PARP9Q8IXQ6 854 aa9.51□□□□□ -0.89
HNRNPC-233ENST00000557768 ADCY10Q96PN6 1610 aa9.5□□□□□ -0.89
HNRNPC-233ENST00000557768 NR1I2O75469 434 aa9.5□□□□□ -0.89
HNRNPC-233ENST00000557768 SSTR3P32745 418 aaPredicted RBP9.5□□□□□ -0.89
HNRNPC-233ENST00000557768 PDE4DQ08499 809 aa9.5□□□□□ -0.89
HNRNPC-233ENST00000557768 GIGYF2Q6Y7W6 1299 aaKnown RBP9.5□□□□□ -0.89
HNRNPC-233ENST00000557768 TLL1O43897 1013 aa9.49□□□□□ -0.89
HNRNPC-233ENST00000557768 ATP6V1AP38606 617 aa9.49□□□□□ -0.89
HNRNPC-233ENST00000557768 DIP2BQ9P265 1576 aa9.49□□□□□ -0.89
HNRNPC-233ENST00000557768 KDM4AO75164 1064 aa9.48□□□□□ -0.89
HNRNPC-233ENST00000557768 C14orf37Q86TY3 774 aa9.48□□□□□ -0.89
HNRNPC-233ENST00000557768 SCUBE3Q8IX30 993 aa9.48□□□□□ -0.89
HNRNPC-233ENST00000557768 MORN1Q5T089 497 aa9.47□□□□□ -0.89
HNRNPC-233ENST00000557768 ABCC10Q5T3U5 1492 aa9.47□□□□□ -0.89
HNRNPC-233ENST00000557768 MAPKBP1O60336 1514 aa9.46□□□□□ -0.89
HNRNPC-233ENST00000557768 CUL7Q14999 1698 aa9.46□□□□□ -0.89
HNRNPC-233ENST00000557768 FAM69CQ0P6D2 419 aa9.46□□□□□ -0.9
HNRNPC-233ENST00000557768 GRIPAP1Q4V328 841 aa9.46□□□□□ -0.9
HNRNPC-233ENST00000557768 PPP1R18Q6NYC8 613 aa9.46□□□□□ -0.9
HNRNPC-233ENST00000557768 NUTM1Q86Y26 1132 aa9.45□□□□□ -0.9
HNRNPC-233ENST00000557768 ARXQ96QS3 562 aa9.45□□□□□ -0.9
HNRNPC-233ENST00000557768 SLC27A5Q9Y2P5 690 aa9.45□□□□□ -0.9
HNRNPC-233ENST00000557768 MS4A1P11836 297 aa9.44□□□□□ -0.9
HNRNPC-233ENST00000557768 GPBP1L1Q9HC44 474 aaPredicted RBP9.44□□□□□ -0.9
HNRNPC-233ENST00000557768 KDM6BO15054 1643 aa9.44□□□□□ -0.9
HNRNPC-233ENST00000557768 HLA-CQ95604 372 aa9.43□□□□□ -0.9
HNRNPC-233ENST00000557768 BEGAINQ9BUH8 593 aa9.43□□□□□ -0.9
HNRNPC-233ENST00000557768 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.43□□□□□ -0.9
HNRNPC-233ENST00000557768 KIAA0586Q9BVV6 1533 aa9.42□□□□□ -0.9
HNRNPC-233ENST00000557768 ADH1BP00325 375 aa9.42□□□□□ -0.9
HNRNPC-233ENST00000557768 USP46P62068 366 aa9.42□□□□□ -0.9
HNRNPC-233ENST00000557768 SPSB2Q99619 263 aa9.42□□□□□ -0.9
HNRNPC-233ENST00000557768 IGF1RP08069 1367 aa9.41□□□□□ -0.9
HNRNPC-233ENST00000557768 GGCXP38435 758 aa9.41□□□□□ -0.9
HNRNPC-233ENST00000557768 BRPF1P55201 1214 aaPredicted RBP9.41□□□□□ -0.9
HNRNPC-233ENST00000557768 GUCA2AQ02747 115 aa9.41□□□□□ -0.9
HNRNPC-233ENST00000557768 KIF27Q86VH2 1401 aa9.4□□□□□ -0.9
HNRNPC-233ENST00000557768 TTBK1Q5TCY1 1321 aaPredicted RBP9.4□□□□□ -0.9
HNRNPC-233ENST00000557768 HOXA2O43364 376 aa9.4□□□□□ -0.9
HNRNPC-233ENST00000557768 FMNL1O95466 1100 aaPredicted RBP9.4□□□□□ -0.9
HNRNPC-233ENST00000557768 S1PR4O95977 384 aa9.4□□□□□ -0.9
HNRNPC-233ENST00000557768 SPIRE2Q8WWL2 714 aa9.39□□□□□ -0.91
HNRNPC-233ENST00000557768 SLC6A16Q9GZN6 736 aa9.39□□□□□ -0.91
HNRNPC-233ENST00000557768 PPRC1Q5VV67 1664 aaKnown RBP9.39□□□□□ -0.91
HNRNPC-233ENST00000557768 RNF19BQ6ZMZ0 732 aa9.38□□□□□ -0.91
HNRNPC-233ENST00000557768 THAP11Q96EK4 314 aa9.38□□□□□ -0.91
HNRNPC-233ENST00000557768 KDM4CQ9H3R0 1056 aa9.38□□□□□ -0.91
HNRNPC-233ENST00000557768 PPEF1O14829 653 aaPredicted RBP9.37□□□□□ -0.91
HNRNPC-233ENST00000557768 RGS20O76081 388 aa9.37□□□□□ -0.91
HNRNPC-233ENST00000557768 NEUROD2Q15784 382 aa9.37□□□□□ -0.91
HNRNPC-233ENST00000557768 Q3C1V9 767 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms