RNA–Protein interactions for RNA: ENST00000557575.5

KLC1-225, Transcript of kinesin light chain 1, human

TSL 5 BASIC

Gene KLC1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLC1-225	ENST00000557575	TNNT2	P45379	298 aa	Predicted RBP	32.24	■■■□□ 2.75
KLC1-225	ENST00000557575	CGNL1	Q0VF96	1302 aa		32.23	■■■□□ 2.75
KLC1-225	ENST00000557575	MSH5	O43196	834 aa		32.23	■■■□□ 2.75
KLC1-225	ENST00000557575	SAFB2	Q14151	953 aa	Known RBP eCLIP	32.23	■■■□□ 2.75
KLC1-225	ENST00000557575	FBXO31	Q5XUX0	539 aa	Predicted RBP	32.23	■■■□□ 2.75
KLC1-225	ENST00000557575	STK26	Q9P289	416 aa		32.22	■■■□□ 2.75
KLC1-225	ENST00000557575	SLFN5	Q08AF3	891 aa		32.22	■■■□□ 2.75
KLC1-225	ENST00000557575	CRBN	Q96SW2	442 aa		32.21	■■■□□ 2.75
KLC1-225	ENST00000557575	ANKRD36B	Q8N2N9	1353 aa		32.2	■■■□□ 2.74
KLC1-225	ENST00000557575	CABP2	Q9NPB3	220 aa		32.19	■■■□□ 2.74
KLC1-225	ENST00000557575	SHPRH	Q149N8	1683 aa		32.18	■■■□□ 2.74
KLC1-225	ENST00000557575	RERE	Q9P2R6	1566 aa		32.17	■■■□□ 2.74
KLC1-225	ENST00000557575	NGEF	Q8N5V2	710 aa		32.17	■■■□□ 2.74
KLC1-225	ENST00000557575	STAG3	Q9UJ98	1225 aa		32.17	■■■□□ 2.74
KLC1-225	ENST00000557575	CLTC	Q00610	1675 aa	Known RBP	32.14	■■■□□ 2.74
KLC1-225	ENST00000557575	AGL	P35573	1532 aa		32.14	■■■□□ 2.74
KLC1-225	ENST00000557575	TRMT2A	Q8IZ69	625 aa	Known RBP	32.13	■■■□□ 2.73
KLC1-225	ENST00000557575	SRPK2	P78362	688 aa	Known RBP	32.12	■■■□□ 2.73
KLC1-225	ENST00000557575	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	32.12	■■■□□ 2.73
KLC1-225	ENST00000557575	NSD2	O96028	1365 aa		32.12	■■■□□ 2.73
KLC1-225	ENST00000557575	C20orf194	Q5TEA3	1177 aa		32.12	■■■□□ 2.73
KLC1-225	ENST00000557575	PTPRM	P28827	1452 aa		32.12	■■■□□ 2.73
KLC1-225	ENST00000557575	NKTR	P30414	1462 aa	Known RBP	32.12	■■■□□ 2.73
KLC1-225	ENST00000557575		E9PSI1	815 aa		32.11	■■■□□ 2.73
KLC1-225	ENST00000557575	SPINK5	Q9NQ38	1064 aa	Predicted RBP	32.11	■■■□□ 2.73
KLC1-225	ENST00000557575	PPP6R1	Q9UPN7	881 aa		32.11	■■■□□ 2.73
KLC1-225	ENST00000557575	YTHDC2	Q9H6S0	1430 aa	Known RBP	32.1	■■■□□ 2.73
KLC1-225	ENST00000557575	NINL	Q9Y2I6	1382 aa		32.09	■■■□□ 2.73
KLC1-225	ENST00000557575	MTHFS	P49914	203 aa		32.09	■■■□□ 2.73
KLC1-225	ENST00000557575	CFAP53	Q96M91	514 aa		32.09	■■■□□ 2.73
KLC1-225	ENST00000557575	POGK	Q9P215	609 aa		32.09	■■■□□ 2.73
KLC1-225	ENST00000557575	ERICH6	Q7L0X2	663 aa		32.08	■■■□□ 2.73
KLC1-225	ENST00000557575	PRAM1	Q96QH2	718 aa		32.08	■■■□□ 2.73
KLC1-225	ENST00000557575	ALK	Q9UM73	1620 aa		32.08	■■■□□ 2.73
KLC1-225	ENST00000557575	MINK1	Q8N4C8	1332 aa	Predicted RBP	32.07	■■■□□ 2.72
KLC1-225	ENST00000557575		A0A1W2PP64	1363 aa		32.05	■■■□□ 2.72
KLC1-225	ENST00000557575	TCERG1	O14776	1098 aa	Known RBP	32.05	■■■□□ 2.72
KLC1-225	ENST00000557575	RUNDC1	Q96C34	613 aa		32.04	■■■□□ 2.72
KLC1-225	ENST00000557575	ATAD2	Q6PL18	1390 aa		32.03	■■■□□ 2.72
KLC1-225	ENST00000557575	MLEC	Q14165	292 aa		32.03	■■■□□ 2.72
KLC1-225	ENST00000557575	WWC1	Q8IX03	1113 aa		32.02	■■■□□ 2.72
KLC1-225	ENST00000557575	DMRT2	Q9Y5R5	561 aa		32.02	■■■□□ 2.72
KLC1-225	ENST00000557575	ABCC11	Q96J66	1382 aa		32.01	■■■□□ 2.71
KLC1-225	ENST00000557575	SPATA31D1	Q6ZQQ2	1576 aa		32	■■■□□ 2.71
KLC1-225	ENST00000557575	NEUROD2	Q15784	382 aa		32	■■■□□ 2.71
KLC1-225	ENST00000557575	A2ML1	A8K2U0	1454 aa		31.98	■■■□□ 2.71
KLC1-225	ENST00000557575	TERF2IP	Q9NYB0	399 aa		31.98	■■■□□ 2.71
KLC1-225	ENST00000557575	IQSEC2	Q5JU85	1478 aa		31.97	■■■□□ 2.71
KLC1-225	ENST00000557575	TCP11L2	Q8N4U5	519 aa		31.97	■■■□□ 2.71
KLC1-225	ENST00000557575	RRP7A	Q9Y3A4	280 aa	Known RBP	31.97	■■■□□ 2.71
KLC1-225	ENST00000557575	ARHGEF40	Q8TER5	1519 aa		31.95	■■■□□ 2.71
KLC1-225	ENST00000557575	ANP32A	P39687	249 aa	Known RBP	31.94	■■■□□ 2.7
KLC1-225	ENST00000557575	BCAR3	O75815	825 aa		31.94	■■■□□ 2.7
KLC1-225	ENST00000557575	KIF13A	Q9H1H9	1805 aa		31.93	■■■□□ 2.7
KLC1-225	ENST00000557575	RIMS2	Q9UQ26	1411 aa		31.93	■■■□□ 2.7
KLC1-225	ENST00000557575	GGNBP2	Q9H3C7	697 aa		31.93	■■■□□ 2.7
KLC1-225	ENST00000557575	MS4A1	P11836	297 aa		31.92	■■■□□ 2.7
KLC1-225	ENST00000557575	ANKRD26	Q9UPS8	1709 aa		31.92	■■■□□ 2.7
KLC1-225	ENST00000557575	CDK19	Q9BWU1	502 aa		31.91	■■■□□ 2.7
KLC1-225	ENST00000557575	U2AF1L5	P0DN76	240 aa	Predicted RBP	31.91	■■■□□ 2.7
KLC1-225	ENST00000557575	U2AF1	Q01081	240 aa	Known RBP eCLIP	31.91	■■■□□ 2.7
KLC1-225	ENST00000557575	CD163L1	Q9NR16	1453 aa		31.9	■■■□□ 2.7
KLC1-225	ENST00000557575	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	31.89	■■■□□ 2.7
KLC1-225	ENST00000557575	ESF1	Q9H501	851 aa	Known RBP	31.89	■■■□□ 2.7
KLC1-225	ENST00000557575	KDM2B	Q8NHM5	1336 aa		31.88	■■■□□ 2.69
KLC1-225	ENST00000557575	PDE4A	P27815	886 aa		31.87	■■■□□ 2.69
KLC1-225	ENST00000557575	CENPQ	Q7L2Z9	268 aa	Predicted RBP	31.87	■■■□□ 2.69
KLC1-225	ENST00000557575	SETD1A	O15047	1707 aa	Known RBP	31.86	■■■□□ 2.69
KLC1-225	ENST00000557575	DLC1	Q96QB1	1528 aa		31.86	■■■□□ 2.69
KLC1-225	ENST00000557575	FYB1	O15117	783 aa		31.85	■■■□□ 2.69
KLC1-225	ENST00000557575	WDR63	Q8IWG1	891 aa		31.85	■■■□□ 2.69
KLC1-225	ENST00000557575	PHF23	Q9BUL5	403 aa	Predicted RBP	31.85	■■■□□ 2.69
KLC1-225	ENST00000557575	MED14	O60244	1454 aa		31.84	■■■□□ 2.69
KLC1-225	ENST00000557575	CCDC27	Q2M243	656 aa		31.84	■■■□□ 2.69
KLC1-225	ENST00000557575	CABP1	Q9NZU7	370 aa		31.84	■■■□□ 2.69
KLC1-225	ENST00000557575	NOP58	Q9Y2X3	529 aa	Known RBP	31.83	■■■□□ 2.69
KLC1-225	ENST00000557575	KIF20B	Q96Q89	1820 aa		31.82	■■■□□ 2.68
KLC1-225	ENST00000557575	CANX	P27824	592 aa	Known RBP	31.82	■■■□□ 2.68
KLC1-225	ENST00000557575	WAPL	Q7Z5K2	1190 aa		31.82	■■■□□ 2.68
KLC1-225	ENST00000557575	SKAP1	Q86WV1	359 aa		31.81	■■■□□ 2.68
KLC1-225	ENST00000557575	NLRP1	Q9C000	1473 aa		31.81	■■■□□ 2.68
KLC1-225	ENST00000557575	BACH2	Q9BYV9	841 aa		31.81	■■■□□ 2.68
KLC1-225	ENST00000557575	U2SURP	O15042	1029 aa	Known RBP	31.8	■■■□□ 2.68
KLC1-225	ENST00000557575	ZMYM3	Q14202	1370 aa		31.8	■■■□□ 2.68
KLC1-225	ENST00000557575	IPO9	Q96P70	1041 aa	Known RBP	31.8	■■■□□ 2.68
KLC1-225	ENST00000557575	ADGRB2	O60241	1585 aa		31.79	■■■□□ 2.68
KLC1-225	ENST00000557575	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	31.78	■■■□□ 2.68
KLC1-225	ENST00000557575	PDE3A	Q14432	1141 aa		31.77	■■■□□ 2.68
KLC1-225	ENST00000557575	NCBP3	Q53F19	620 aa	Known RBP	31.77	■■■□□ 2.68
KLC1-225	ENST00000557575	COL3A1	P02461	1466 aa	Predicted RBP	31.77	■■■□□ 2.68
KLC1-225	ENST00000557575	NRXN3	Q9Y4C0	1643 aa		31.76	■■■□□ 2.68
KLC1-225	ENST00000557575	NPM2	Q86SE8	214 aa	Known RBP	31.74	■■■□□ 2.67
KLC1-225	ENST00000557575	MYH16	Q9H6N6	1097 aa		31.74	■■■□□ 2.67
KLC1-225	ENST00000557575	ATP7B	P35670	1465 aa		31.73	■■■□□ 2.67
KLC1-225	ENST00000557575	FRAT1	Q92837	279 aa	Predicted RBP	31.73	■■■□□ 2.67
KLC1-225	ENST00000557575	RARS	P54136	660 aa	Known RBP	31.72	■■■□□ 2.67
KLC1-225	ENST00000557575	MAPK8IP3	Q9UPT6	1336 aa		31.71	■■■□□ 2.67
KLC1-225	ENST00000557575	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	31.7	■■■□□ 2.67
KLC1-225	ENST00000557575	MET	P08581	1390 aa		31.7	■■■□□ 2.66
KLC1-225	ENST00000557575	PLEKHF1	Q96S99	279 aa		31.69	■■■□□ 2.66

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms