RNA–Protein interactions for RNA: ENST00000557561.2

AC087641.1-201, humanhuman

BASIC

Gene AC087641.1, Length 1,021 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087641.1-201ENST00000557561 PTCH1Q13635 1447 aa24.2■■□□□ 1.46
AC087641.1-201ENST00000557561 PNPLA6Q8IY17 1366 aa24.2■■□□□ 1.46
AC087641.1-201ENST00000557561 L3MBTL2Q969R5 705 aa24.2■■□□□ 1.46
AC087641.1-201ENST00000557561 STAC3Q96MF2 364 aa24.18■■□□□ 1.46
AC087641.1-201ENST00000557561 DCAF11Q8TEB1 546 aa24.17■■□□□ 1.46
AC087641.1-201ENST00000557561 PRAG1Q86YV5 1406 aa24.17■■□□□ 1.46
AC087641.1-201ENST00000557561 RGS12O14924 1447 aa24.15■■□□□ 1.46
AC087641.1-201ENST00000557561 C1orf167Q5SNV9 1468 aa24.14■■□□□ 1.46
AC087641.1-201ENST00000557561 KDM2AQ9Y2K7 1162 aa24.13■■□□□ 1.45
AC087641.1-201ENST00000557561 PPLO60437 1756 aa24.13■■□□□ 1.45
AC087641.1-201ENST00000557561 IFT172Q9UG01 1749 aa24.13■■□□□ 1.45
AC087641.1-201ENST00000557561 VGFO15240 615 aaPredicted RBP24.12■■□□□ 1.45
AC087641.1-201ENST00000557561 C8orf37Q96NL8 207 aa24.12■■□□□ 1.45
AC087641.1-201ENST00000557561 RBM6P78332 1123 aaKnown RBP24.11■■□□□ 1.45
AC087641.1-201ENST00000557561 MYOM2P54296 1465 aa24.11■■□□□ 1.45
AC087641.1-201ENST00000557561 DDX17Q92841 729 aaKnown RBP24.09■■□□□ 1.45
AC087641.1-201ENST00000557561 COL22A1Q8NFW1 1626 aaPredicted RBP24.07■■□□□ 1.44
AC087641.1-201ENST00000557561 QTRT2Q9H974 415 aaKnown RBP24.07■■□□□ 1.44
AC087641.1-201ENST00000557561 ROBO2Q9HCK4 1378 aa24.06■■□□□ 1.44
AC087641.1-201ENST00000557561 SOS2Q07890 1332 aaPredicted RBP24.06■■□□□ 1.44
AC087641.1-201ENST00000557561 CDC42BPGQ6DT37 1551 aa24.05■■□□□ 1.44
AC087641.1-201ENST00000557561 NGLY1Q96IV0 654 aa24.03■■□□□ 1.44
AC087641.1-201ENST00000557561 ADAMTS2O95450 1211 aa24.02■■□□□ 1.44
AC087641.1-201ENST00000557561 ADGRF5Q8IZF2 1346 aa24.02■■□□□ 1.44
AC087641.1-201ENST00000557561 SRCAPQ6ZRS2 3230 aa24.02■■□□□ 1.44
AC087641.1-201ENST00000557561 NRXN1Q9ULB1 1477 aa24.01■■□□□ 1.43
AC087641.1-201ENST00000557561 ATAD2Q6PL18 1390 aa24.01■■□□□ 1.43
AC087641.1-201ENST00000557561 MARF1Q9Y4F3 1742 aaKnown RBP23.99■■□□□ 1.43
AC087641.1-201ENST00000557561 ORAI2Q96SN7 254 aa23.99■■□□□ 1.43
AC087641.1-201ENST00000557561 PIK3C2GO75747 1445 aa23.99■■□□□ 1.43
AC087641.1-201ENST00000557561 EP400Q96L91 3159 aa23.98■■□□□ 1.43
AC087641.1-201ENST00000557561 TRPC5Q9UL62 973 aaPredicted RBP23.97■■□□□ 1.43
AC087641.1-201ENST00000557561 NBPF8Q3BBV2 869 aa23.96■■□□□ 1.43
AC087641.1-201ENST00000557561 USP21Q9UK80 565 aa23.96■■□□□ 1.43
AC087641.1-201ENST00000557561 ATRNO75882 1429 aa23.95■■□□□ 1.42
AC087641.1-201ENST00000557561 NPHP3Q7Z494 1330 aa23.95■■□□□ 1.42
AC087641.1-201ENST00000557561 FNBP4Q8N3X1 1017 aaPredicted RBP23.95■■□□□ 1.42
AC087641.1-201ENST00000557561 PXDNQ92626 1479 aa23.94■■□□□ 1.42
AC087641.1-201ENST00000557561 KNDC1Q76NI1 1749 aa23.93■■□□□ 1.42
AC087641.1-201ENST00000557561 KIAA1210Q9ULL0 1709 aa23.93■■□□□ 1.42
AC087641.1-201ENST00000557561 TRPM1Q7Z4N2 1603 aa23.92■■□□□ 1.42
AC087641.1-201ENST00000557561 RALGAPBQ86X10 1494 aa23.92■■□□□ 1.42
AC087641.1-201ENST00000557561 TECPR2O15040 1411 aa23.92■■□□□ 1.42
AC087641.1-201ENST00000557561 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.91■■□□□ 1.42
AC087641.1-201ENST00000557561 C14orf93Q9H972 538 aaKnown RBP23.91■■□□□ 1.42
AC087641.1-201ENST00000557561 CFAP70Q5T0N1 1121 aa23.9■■□□□ 1.42
AC087641.1-201ENST00000557561 ROCK2O75116 1388 aaKnown RBP23.9■■□□□ 1.42
AC087641.1-201ENST00000557561 LRPPRCP42704 1394 aaKnown RBP23.89■■□□□ 1.41
AC087641.1-201ENST00000557561 KIF1AQ12756 1690 aa23.88■■□□□ 1.41
AC087641.1-201ENST00000557561 ESCO1Q5FWF5 840 aa23.87■■□□□ 1.41
AC087641.1-201ENST00000557561 FMN2Q9NZ56 1722 aa23.86■■□□□ 1.41
AC087641.1-201ENST00000557561 BCL9LQ86UU0 1499 aa23.86■■□□□ 1.41
AC087641.1-201ENST00000557561 GPRASP1Q5JY77 1395 aa23.83■■□□□ 1.41
AC087641.1-201ENST00000557561 NBPF1Q3BBV0 1214 aa23.83■■□□□ 1.41
AC087641.1-201ENST00000557561 CARD11Q9BXL7 1154 aa23.83■■□□□ 1.41
AC087641.1-201ENST00000557561 ABCC11Q96J66 1382 aa23.81■■□□□ 1.4
AC087641.1-201ENST00000557561 FOXO3O43524 673 aa23.81■■□□□ 1.4
AC087641.1-201ENST00000557561 CCDC125Q86Z20 511 aa23.8■■□□□ 1.4
AC087641.1-201ENST00000557561 USP32Q8NFA0 1604 aa23.8■■□□□ 1.4
AC087641.1-201ENST00000557561 ADGRB1O14514 1584 aa23.79■■□□□ 1.4
AC087641.1-201ENST00000557561 TMEM132EQ6IEE7 984 aa23.79■■□□□ 1.4
AC087641.1-201ENST00000557561 XPCQ01831 940 aaPredicted RBP23.78■■□□□ 1.4
AC087641.1-201ENST00000557561 GJD4Q96KN9 370 aaPredicted RBP23.77■■□□□ 1.4
AC087641.1-201ENST00000557561 ZRANB1Q9UGI0 708 aa23.77■■□□□ 1.4
AC087641.1-201ENST00000557561 SLIT2O94813 1529 aa23.77■■□□□ 1.4
AC087641.1-201ENST00000557561 GLI3P10071 1580 aa23.77■■□□□ 1.4
AC087641.1-201ENST00000557561 STK26Q9P289 416 aa23.76■■□□□ 1.39
AC087641.1-201ENST00000557561 YTHDC2Q9H6S0 1430 aaKnown RBP23.76■■□□□ 1.39
AC087641.1-201ENST00000557561 WAPLQ7Z5K2 1190 aa23.75■■□□□ 1.39
AC087641.1-201ENST00000557561 SPATA31A3Q5VYP0 1347 aa23.74■■□□□ 1.39
AC087641.1-201ENST00000557561 EIF3AQ14152 1382 aaKnown RBP23.74■■□□□ 1.39
AC087641.1-201ENST00000557561 PLEKHH1Q9ULM0 1364 aa23.74■■□□□ 1.39
AC087641.1-201ENST00000557561 NWD2Q9ULI1 1742 aa23.73■■□□□ 1.39
AC087641.1-201ENST00000557561 NUTM2FA1L443 756 aa23.72■■□□□ 1.39
AC087641.1-201ENST00000557561 EIF4G2P78344 907 aaKnown RBP eCLIP23.72■■□□□ 1.39
AC087641.1-201ENST00000557561 UNC5CLQ8IV45 518 aa23.72■■□□□ 1.39
AC087641.1-201ENST00000557561 ABCA3Q99758 1704 aa23.72■■□□□ 1.39
AC087641.1-201ENST00000557561 RGPD8O14715 1765 aaPredicted RBP23.72■■□□□ 1.39
AC087641.1-201ENST00000557561 BRWD3Q6RI45 1802 aa23.71■■□□□ 1.39
AC087641.1-201ENST00000557561 PLCH1Q4KWH8 1693 aa23.71■■□□□ 1.39
AC087641.1-201ENST00000557561 TNS3Q68CZ2 1445 aa23.71■■□□□ 1.39
AC087641.1-201ENST00000557561 USP47Q96K76 1375 aa23.71■■□□□ 1.39
AC087641.1-201ENST00000557561 TRAK1Q9UPV9 953 aa23.71■■□□□ 1.39
AC087641.1-201ENST00000557561 BLMP54132 1417 aaPredicted RBP23.7■■□□□ 1.38
AC087641.1-201ENST00000557561 SIRT1Q96EB6 747 aa23.68■■□□□ 1.38
AC087641.1-201ENST00000557561 DLC1Q96QB1 1528 aa23.68■■□□□ 1.38
AC087641.1-201ENST00000557561 KRT28Q7Z3Y7 464 aa23.65■■□□□ 1.38
AC087641.1-201ENST00000557561 ARHGEF28Q8N1W1 1705 aaKnown RBP23.64■■□□□ 1.38
AC087641.1-201ENST00000557561 POGKQ9P215 609 aa23.64■■□□□ 1.37
AC087641.1-201ENST00000557561 SBNO1A3KN83 1393 aa23.64■■□□□ 1.37
AC087641.1-201ENST00000557561 ARHGEF10O15013 1369 aa23.64■■□□□ 1.37
AC087641.1-201ENST00000557561 ADGRB2O60241 1585 aa23.63■■□□□ 1.37
AC087641.1-201ENST00000557561 HSPA5P11021 654 aaKnown RBP23.63■■□□□ 1.37
AC087641.1-201ENST00000557561 HAP1P54257 671 aaPredicted RBP23.63■■□□□ 1.37
AC087641.1-201ENST00000557561 PSME1Q06323 249 aa23.63■■□□□ 1.37
AC087641.1-201ENST00000557561 PHF8Q9UPP1 1060 aa23.63■■□□□ 1.37
AC087641.1-201ENST00000557561 CENPJQ9HC77 1338 aaPredicted RBP23.62■■□□□ 1.37
AC087641.1-201ENST00000557561 ANKARQ7Z5J8 1434 aa23.61■■□□□ 1.37
AC087641.1-201ENST00000557561 VPS72Q15906 364 aa23.61■■□□□ 1.37
AC087641.1-201ENST00000557561 PRAM1Q96QH2 718 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms