RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 RGS12O14924 1447 aa33.19■■■□□ 2.9
PABPN1-207ENST00000556821 QTRT2Q9H974 415 aaKnown RBP33.19■■■□□ 2.9
PABPN1-207ENST00000556821 MST1RQ04912 1400 aa33.19■■■□□ 2.9
PABPN1-207ENST00000556821 SRCAPQ6ZRS2 3230 aa33.17■■■□□ 2.9
PABPN1-207ENST00000556821 NHSL1Q5SYE7 1610 aa33.17■■■□□ 2.9
PABPN1-207ENST00000556821 LRPPRCP42704 1394 aaKnown RBP33.17■■■□□ 2.9
PABPN1-207ENST00000556821 YTHDC2Q9H6S0 1430 aaKnown RBP33.14■■■□□ 2.9
PABPN1-207ENST00000556821 DHX57Q6P158 1386 aaKnown RBP33.14■■■□□ 2.9
PABPN1-207ENST00000556821 TMEM132EQ6IEE7 984 aa33.14■■■□□ 2.9
PABPN1-207ENST00000556821 LRRC59Q96AG4 307 aaKnown RBP33.14■■■□□ 2.9
PABPN1-207ENST00000556821 C14orf93Q9H972 538 aaKnown RBP33.14■■■□□ 2.9
PABPN1-207ENST00000556821 CDC42BPGQ6DT37 1551 aa33.13■■■□□ 2.89
PABPN1-207ENST00000556821 ADGRB1O14514 1584 aa33.13■■■□□ 2.89
PABPN1-207ENST00000556821 ABCC11Q96J66 1382 aa33.11■■■□□ 2.89
PABPN1-207ENST00000556821 CFAP70Q5T0N1 1121 aa33.1■■■□□ 2.89
PABPN1-207ENST00000556821 C8orf37Q96NL8 207 aa33.09■■■□□ 2.89
PABPN1-207ENST00000556821 STK26Q9P289 416 aa33.08■■■□□ 2.89
PABPN1-207ENST00000556821 DCAF11Q8TEB1 546 aa33.07■■■□□ 2.88
PABPN1-207ENST00000556821 FMN2Q9NZ56 1722 aa33.07■■■□□ 2.88
PABPN1-207ENST00000556821 PNPLA6Q8IY17 1366 aa33.07■■■□□ 2.88
PABPN1-207ENST00000556821 KIAA1210Q9ULL0 1709 aa33.05■■■□□ 2.88
PABPN1-207ENST00000556821 PLEKHH1Q9ULM0 1364 aa33.05■■■□□ 2.88
PABPN1-207ENST00000556821 RGPD8O14715 1765 aaPredicted RBP33.04■■■□□ 2.88
PABPN1-207ENST00000556821 KDM2AQ9Y2K7 1162 aa33.03■■■□□ 2.88
PABPN1-207ENST00000556821 DLC1Q96QB1 1528 aa33.02■■■□□ 2.88
PABPN1-207ENST00000556821 C1orf167Q5SNV9 1468 aa33.02■■■□□ 2.88
PABPN1-207ENST00000556821 DDX17Q92841 729 aaKnown RBP33.02■■■□□ 2.88
PABPN1-207ENST00000556821 WAPLQ7Z5K2 1190 aa33.01■■■□□ 2.87
PABPN1-207ENST00000556821 ARHGEF28Q8N1W1 1705 aaKnown RBP33.01■■■□□ 2.87
PABPN1-207ENST00000556821 TRIM26Q12899 539 aaPredicted RBP33■■■□□ 2.87
PABPN1-207ENST00000556821 NGLY1Q96IV0 654 aa33■■■□□ 2.87
PABPN1-207ENST00000556821 STAC3Q96MF2 364 aa32.99■■■□□ 2.87
PABPN1-207ENST00000556821 ATAD2Q6PL18 1390 aa32.97■■■□□ 2.87
PABPN1-207ENST00000556821 SIRT1Q96EB6 747 aa32.94■■■□□ 2.86
PABPN1-207ENST00000556821 ZRANB1Q9UGI0 708 aa32.93■■■□□ 2.86
PABPN1-207ENST00000556821 ADGRB2O60241 1585 aa32.92■■■□□ 2.86
PABPN1-207ENST00000556821 FNBP4Q8N3X1 1017 aaPredicted RBP32.92■■■□□ 2.86
PABPN1-207ENST00000556821 ADAMTS2O95450 1211 aa32.91■■■□□ 2.86
PABPN1-207ENST00000556821 TRPC5Q9UL62 973 aaPredicted RBP32.89■■■□□ 2.86
PABPN1-207ENST00000556821 USP21Q9UK80 565 aa32.88■■■□□ 2.85
PABPN1-207ENST00000556821 ORAI2Q96SN7 254 aa32.87■■■□□ 2.85
PABPN1-207ENST00000556821 SIN3AQ96ST3 1273 aa32.87■■■□□ 2.85
PABPN1-207ENST00000556821 USP32Q8NFA0 1604 aa32.87■■■□□ 2.85
PABPN1-207ENST00000556821 SOS2Q07890 1332 aaPredicted RBP32.86■■■□□ 2.85
PABPN1-207ENST00000556821 KIF1AQ12756 1690 aa32.86■■■□□ 2.85
PABPN1-207ENST00000556821 PRAM1Q96QH2 718 aa32.85■■■□□ 2.85
PABPN1-207ENST00000556821 CCDC125Q86Z20 511 aa32.84■■■□□ 2.85
PABPN1-207ENST00000556821 TRPM1Q7Z4N2 1603 aa32.84■■■□□ 2.85
PABPN1-207ENST00000556821 ATRNO75882 1429 aa32.82■■■□□ 2.84
PABPN1-207ENST00000556821 TRAK1Q9UPV9 953 aa32.81■■■□□ 2.84
PABPN1-207ENST00000556821 SAFB2Q14151 953 aaKnown RBP eCLIP32.79■■■□□ 2.84
PABPN1-207ENST00000556821 L3MBTL2Q969R5 705 aa32.78■■■□□ 2.84
PABPN1-207ENST00000556821 NUTM2FA1L443 756 aa32.77■■■□□ 2.84
PABPN1-207ENST00000556821 PXDNQ92626 1479 aa32.76■■■□□ 2.84
PABPN1-207ENST00000556821 POGKQ9P215 609 aa32.75■■■□□ 2.83
PABPN1-207ENST00000556821 COL22A1Q8NFW1 1626 aaPredicted RBP32.74■■■□□ 2.83
PABPN1-207ENST00000556821 ESCO1Q5FWF5 840 aa32.74■■■□□ 2.83
PABPN1-207ENST00000556821 NEUROD1Q13562 356 aa32.73■■■□□ 2.83
PABPN1-207ENST00000556821 ITSN1Q15811 1721 aa32.71■■■□□ 2.83
PABPN1-207ENST00000556821 NBPF1Q3BBV0 1214 aa32.71■■■□□ 2.83
PABPN1-207ENST00000556821 BCL9LQ86UU0 1499 aa32.7■■■□□ 2.83
PABPN1-207ENST00000556821 QRICH2Q9H0J4 1663 aa32.69■■■□□ 2.82
PABPN1-207ENST00000556821 TULP4Q9NRJ4 1543 aa32.68■■■□□ 2.82
PABPN1-207ENST00000556821 ANKARQ7Z5J8 1434 aa32.68■■■□□ 2.82
PABPN1-207ENST00000556821 MARF1Q9Y4F3 1742 aaKnown RBP32.67■■■□□ 2.82
PABPN1-207ENST00000556821 NPHP3Q7Z494 1330 aa32.67■■■□□ 2.82
PABPN1-207ENST00000556821 MINK1Q8N4C8 1332 aaPredicted RBP32.67■■■□□ 2.82
PABPN1-207ENST00000556821 HIRIP3Q9BW71 556 aaPredicted RBP32.65■■■□□ 2.82
PABPN1-207ENST00000556821 FOXO3O43524 673 aa32.64■■■□□ 2.82
PABPN1-207ENST00000556821 TOPAZ1Q8N9V7 1692 aa32.64■■■□□ 2.82
PABPN1-207ENST00000556821 GJD4Q96KN9 370 aaPredicted RBP32.64■■■□□ 2.82
PABPN1-207ENST00000556821 TRPM3Q9HCF6 1732 aaPredicted RBP32.61■■■□□ 2.81
PABPN1-207ENST00000556821 XPCQ01831 940 aaPredicted RBP32.6■■■□□ 2.81
PABPN1-207ENST00000556821 PRR36Q9H6K5 1346 aa32.59■■■□□ 2.81
PABPN1-207ENST00000556821 EP400Q96L91 3159 aa32.59■■■□□ 2.81
PABPN1-207ENST00000556821 ABCA3Q99758 1704 aa32.58■■■□□ 2.81
PABPN1-207ENST00000556821 ATP7BP35670 1465 aa32.58■■■□□ 2.81
PABPN1-207ENST00000556821 EIF3AQ14152 1382 aaKnown RBP32.58■■■□□ 2.81
PABPN1-207ENST00000556821 WASLO00401 505 aaPredicted RBP32.57■■■□□ 2.8
PABPN1-207ENST00000556821 PHF8Q9UPP1 1060 aa32.57■■■□□ 2.8
PABPN1-207ENST00000556821 BLMP54132 1417 aaPredicted RBP32.55■■■□□ 2.8
PABPN1-207ENST00000556821 NBPF8Q3BBV2 869 aa32.53■■■□□ 2.8
PABPN1-207ENST00000556821 ALS2Q96Q42 1657 aa32.53■■■□□ 2.8
PABPN1-207ENST00000556821 TONSLQ96HA7 1378 aa32.52■■■□□ 2.8
PABPN1-207ENST00000556821 DEFB132Q7Z7B7 95 aa32.51■■■□□ 2.79
PABPN1-207ENST00000556821 ROCK2O75116 1388 aaKnown RBP32.48■■■□□ 2.79
PABPN1-207ENST00000556821 KRT28Q7Z3Y7 464 aa32.48■■■□□ 2.79
PABPN1-207ENST00000556821 UNC5CLQ8IV45 518 aa32.48■■■□□ 2.79
PABPN1-207ENST00000556821 PMFBP1Q8TBY8 1022 aa32.48■■■□□ 2.79
PABPN1-207ENST00000556821 SPATA31A3Q5VYP0 1347 aa32.48■■■□□ 2.79
PABPN1-207ENST00000556821 CENPJQ9HC77 1338 aaPredicted RBP32.48■■■□□ 2.79
PABPN1-207ENST00000556821 GPRASP1Q5JY77 1395 aa32.47■■■□□ 2.79
PABPN1-207ENST00000556821 TNS3Q68CZ2 1445 aa32.47■■■□□ 2.79
PABPN1-207ENST00000556821 RALGAPBQ86X10 1494 aa32.47■■■□□ 2.79
PABPN1-207ENST00000556821 CRYBG1Q9Y4K1 1723 aa32.46■■■□□ 2.79
PABPN1-207ENST00000556821 SLIT2O94813 1529 aa32.43■■■□□ 2.78
PABPN1-207ENST00000556821 CDK19Q9BWU1 502 aa32.43■■■□□ 2.78
PABPN1-207ENST00000556821 SBNO1A3KN83 1393 aa32.43■■■□□ 2.78
PABPN1-207ENST00000556821 PCGF6Q9BYE7 350 aa32.42■■■□□ 2.78
PABPN1-207ENST00000556821 NUDT16Q96DE0 195 aaKnown RBP32.41■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms