RNA–Protein interactions for RNA: ENST00000555363.1

SEC23A-209, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2

Gene SEC23A, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-209ENST00000555363 LCE2BO14633 110 aa12.19□□□□□ -0.46
SEC23A-209ENST00000555363 FAM217BQ9NTX9 383 aaPredicted RBP12.19□□□□□ -0.46
SEC23A-209ENST00000555363 TTLL12Q14166 644 aaPredicted RBP12.18□□□□□ -0.46
SEC23A-209ENST00000555363 GDF9O60383 454 aa12.17□□□□□ -0.46
SEC23A-209ENST00000555363 DGAT1O75907 488 aa12.17□□□□□ -0.46
SEC23A-209ENST00000555363 USB1Q9BQ65 265 aaKnown RBP12.17□□□□□ -0.46
SEC23A-209ENST00000555363 HOXA2O43364 376 aa12.16□□□□□ -0.46
SEC23A-209ENST00000555363 HLA-CQ95604 372 aa12.16□□□□□ -0.46
SEC23A-209ENST00000555363 BARGINQ6ZT62 677 aa12.15□□□□□ -0.46
SEC23A-209ENST00000555363 CCDC24Q8N4L8 307 aa12.14□□□□□ -0.47
SEC23A-209ENST00000555363 ZC3H15Q8WU90 426 aaKnown RBP12.14□□□□□ -0.47
SEC23A-209ENST00000555363 ZMYND10O75800 440 aa12.13□□□□□ -0.47
SEC23A-209ENST00000555363 GUCA2AQ02747 115 aa12.13□□□□□ -0.47
SEC23A-209ENST00000555363 ZNF787Q6DD87 383 aa12.13□□□□□ -0.47
SEC23A-209ENST00000555363 SSTR3P32745 418 aaPredicted RBP12.12□□□□□ -0.47
SEC23A-209ENST00000555363 CYP4X1Q8N118 509 aa12.11□□□□□ -0.47
SEC23A-209ENST00000555363 MMP16P51512 607 aa12.1□□□□□ -0.47
SEC23A-209ENST00000555363 PKD2L1Q9P0L9 805 aa12.1□□□□□ -0.47
SEC23A-209ENST00000555363 MYT1Q01538 1121 aa12.09□□□□□ -0.47
SEC23A-209ENST00000555363 REPIN1Q9BWE0 567 aaKnown RBP12.09□□□□□ -0.47
SEC23A-209ENST00000555363 FDX1P10109 184 aa12.08□□□□□ -0.48
SEC23A-209ENST00000555363 C6orf229H3BNL8 230 aa12.07□□□□□ -0.48
SEC23A-209ENST00000555363 DXOO77932 396 aaKnown RBP12.07□□□□□ -0.48
SEC23A-209ENST00000555363 SYMPKQ92797 1274 aaKnown RBP12.07□□□□□ -0.48
SEC23A-209ENST00000555363 TTC24A2A3L6 582 aaPredicted RBP12.06□□□□□ -0.48
SEC23A-209ENST00000555363 TRIM32Q13049 653 aa12.06□□□□□ -0.48
SEC23A-209ENST00000555363 AMHR2Q16671 573 aa12.05□□□□□ -0.48
SEC23A-209ENST00000555363 JUNDP17535 347 aa12.04□□□□□ -0.48
SEC23A-209ENST00000555363 GIGYF2Q6Y7W6 1299 aaKnown RBP12.04□□□□□ -0.48
SEC23A-209ENST00000555363 RETREG3Q86VR2 466 aa12.04□□□□□ -0.48
SEC23A-209ENST00000555363 SPIRE2Q8WWL2 714 aa12.03□□□□□ -0.48
SEC23A-209ENST00000555363 BEGAINQ9BUH8 593 aa12.01□□□□□ -0.49
SEC23A-209ENST00000555363 NDUFV2P19404 249 aa12□□□□□ -0.49
SEC23A-209ENST00000555363 AK7Q96M32 723 aa12□□□□□ -0.49
SEC23A-209ENST00000555363 TOR4AQ9NXH8 423 aa12□□□□□ -0.49
SEC23A-209ENST00000555363 WNT7AO00755 349 aa11.99□□□□□ -0.49
SEC23A-209ENST00000555363 ST8SIA5O15466 376 aa11.99□□□□□ -0.49
SEC23A-209ENST00000555363 NUDT12Q9BQG2 462 aa11.99□□□□□ -0.49
SEC23A-209ENST00000555363 PCDHGC3Q9UN70 934 aa11.99□□□□□ -0.49
SEC23A-209ENST00000555363 MOXD2PA6NHM9 499 aa11.98□□□□□ -0.49
SEC23A-209ENST00000555363 TRIM66O15016 1216 aa11.97□□□□□ -0.49
SEC23A-209ENST00000555363 DIXDC1Q155Q3 683 aa11.97□□□□□ -0.49
SEC23A-209ENST00000555363 AAASQ9NRG9 546 aa11.97□□□□□ -0.49
SEC23A-209ENST00000555363 MS4A1P11836 297 aa11.96□□□□□ -0.49
SEC23A-209ENST00000555363 SNIP1Q8TAD8 396 aaKnown RBP11.96□□□□□ -0.49
SEC23A-209ENST00000555363 MRGPRX2Q96LB1 330 aa11.96□□□□□ -0.49
SEC23A-209ENST00000555363 AXIN1O15169 862 aa11.95□□□□□ -0.5
SEC23A-209ENST00000555363 PARP9Q8IXQ6 854 aa11.95□□□□□ -0.5
SEC23A-209ENST00000555363 MTMR2Q13614 643 aa11.94□□□□□ -0.5
SEC23A-209ENST00000555363 RC3H1Q5TC82 1133 aaKnown RBP11.94□□□□□ -0.5
SEC23A-209ENST00000555363 TBC1D2Q9BYX2 928 aa11.94□□□□□ -0.5
SEC23A-209ENST00000555363 WNT7BP56706 349 aa11.93□□□□□ -0.5
SEC23A-209ENST00000555363 BCANQ96GW7 911 aa11.93□□□□□ -0.5
SEC23A-209ENST00000555363 CCNYL3P0C7X3 344 aa11.92□□□□□ -0.5
SEC23A-209ENST00000555363 CTC1Q2NKJ3 1217 aa11.92□□□□□ -0.5
SEC23A-209ENST00000555363 PRR7Q8TB68 274 aa11.92□□□□□ -0.5
SEC23A-209ENST00000555363 SPDYE5A6NIY4 337 aa11.91□□□□□ -0.5
SEC23A-209ENST00000555363 AVPP01185 164 aa11.91□□□□□ -0.5
SEC23A-209ENST00000555363 POTECB2RU33 542 aa11.9□□□□□ -0.5
SEC23A-209ENST00000555363 SKOR1P84550 965 aa11.89□□□□□ -0.51
SEC23A-209ENST00000555363 PTPRNQ16849 979 aa11.89□□□□□ -0.51
SEC23A-209ENST00000555363 PTCRAQ6ISU1 281 aaPredicted RBP11.89□□□□□ -0.51
SEC23A-209ENST00000555363 CRIPAKQ8N1N5 446 aa11.89□□□□□ -0.51
SEC23A-209ENST00000555363 EHBP1Q8NDI1 1231 aa11.89□□□□□ -0.51
SEC23A-209ENST00000555363 ZNF775Q96BV0 537 aaPredicted RBP11.89□□□□□ -0.51
SEC23A-209ENST00000555363 J3QL48 77 aa11.88□□□□□ -0.51
SEC23A-209ENST00000555363 SMPD1P17405 629 aa11.88□□□□□ -0.51
SEC23A-209ENST00000555363 RSBN1LQ6PCB5 846 aaPredicted RBP11.88□□□□□ -0.51
SEC23A-209ENST00000555363 SLC24A3Q9HC58 644 aa11.87□□□□□ -0.51
SEC23A-209ENST00000555363 PDE4DQ08499 809 aa11.86□□□□□ -0.51
SEC23A-209ENST00000555363 CSPP1Q1MSJ5 1256 aa11.86□□□□□ -0.51
SEC23A-209ENST00000555363 ALDH1A1P00352 501 aa11.85□□□□□ -0.51
SEC23A-209ENST00000555363 CTHP32929 405 aa11.85□□□□□ -0.51
SEC23A-209ENST00000555363 GJA5P36382 358 aa11.85□□□□□ -0.51
SEC23A-209ENST00000555363 RIC3Q7Z5B4 369 aa11.85□□□□□ -0.51
SEC23A-209ENST00000555363 UNC93B1Q9H1C4 597 aa11.85□□□□□ -0.51
SEC23A-209ENST00000555363 ZBTB3Q9H5J0 574 aa11.85□□□□□ -0.51
SEC23A-209ENST00000555363 DACH1Q9UI36 760 aa11.85□□□□□ -0.51
SEC23A-209ENST00000555363 SMCPP49901 116 aaPredicted RBP11.84□□□□□ -0.51
SEC23A-209ENST00000555363 KCNH2Q12809 1159 aa11.84□□□□□ -0.51
SEC23A-209ENST00000555363 EVA1BQ9NVM1 165 aa11.84□□□□□ -0.51
SEC23A-209ENST00000555363 C11orf95C9JLR9 678 aaPredicted RBP11.83□□□□□ -0.52
SEC23A-209ENST00000555363 SPTLC1O15269 473 aa11.83□□□□□ -0.52
SEC23A-209ENST00000555363 LINC01559Q495D7 138 aa11.83□□□□□ -0.52
SEC23A-209ENST00000555363 DESI1Q6ICB0 168 aa11.83□□□□□ -0.52
SEC23A-209ENST00000555363 TSC1Q92574 1164 aa11.83□□□□□ -0.52
SEC23A-209ENST00000555363 GMPR2Q9P2T1 348 aaKnown RBP11.83□□□□□ -0.52
SEC23A-209ENST00000555363 PCDHB15Q9Y5E8 787 aa11.83□□□□□ -0.52
SEC23A-209ENST00000555363 WASF2Q9Y6W5 498 aa11.82□□□□□ -0.52
SEC23A-209ENST00000555363 NUTM2BA6NNL0 878 aaPredicted RBP11.81□□□□□ -0.52
SEC23A-209ENST00000555363 NUTM2EB1AL46 878 aaPredicted RBP11.81□□□□□ -0.52
SEC23A-209ENST00000555363 SH3BP2P78314 561 aa11.81□□□□□ -0.52
SEC23A-209ENST00000555363 NUTM2DQ5VT03 806 aaPredicted RBP11.81□□□□□ -0.52
SEC23A-209ENST00000555363 NUTM2AQ8IVF1 878 aaPredicted RBP11.81□□□□□ -0.52
SEC23A-209ENST00000555363 BAP1Q92560 729 aa11.81□□□□□ -0.52
SEC23A-209ENST00000555363 HPS1Q92902 700 aa11.81□□□□□ -0.52
SEC23A-209ENST00000555363 HRCP23327 699 aa11.8□□□□□ -0.52
SEC23A-209ENST00000555363 PRPF38BQ5VTL8 546 aaKnown RBP11.78□□□□□ -0.52
SEC23A-209ENST00000555363 CABLES1Q8TDN4 633 aa11.78□□□□□ -0.52
SEC23A-209ENST00000555363 CFAP99D6REC4 459 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms