RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 PRAM1Q96QH2 718 aa29.38■■■□□ 2.29
FOXN3-209ENST00000555353 POGKQ9P215 609 aa29.38■■■□□ 2.29
FOXN3-209ENST00000555353 NBPF1Q3BBV0 1214 aa29.37■■■□□ 2.29
FOXN3-209ENST00000555353 TRPM1Q7Z4N2 1603 aa29.35■■■□□ 2.29
FOXN3-209ENST00000555353 HSPA1LP34931 641 aa29.35■■■□□ 2.29
FOXN3-209ENST00000555353 MST1RQ04912 1400 aa29.34■■■□□ 2.29
FOXN3-209ENST00000555353 SAFB2Q14151 953 aaKnown RBP eCLIP29.34■■■□□ 2.29
FOXN3-209ENST00000555353 CDC42BPGQ6DT37 1551 aa29.33■■■□□ 2.29
FOXN3-209ENST00000555353 ARHGEF28Q8N1W1 1705 aaKnown RBP29.32■■■□□ 2.28
FOXN3-209ENST00000555353 NBPF8Q3BBV2 869 aa29.3■■■□□ 2.28
FOXN3-209ENST00000555353 ROCK2O75116 1388 aaKnown RBP29.29■■■□□ 2.28
FOXN3-209ENST00000555353 C1orf167Q5SNV9 1468 aa29.26■■■□□ 2.27
FOXN3-209ENST00000555353 BRINP3Q76B58 766 aa29.26■■■□□ 2.27
FOXN3-209ENST00000555353 TIMELESSQ9UNS1 1208 aa29.24■■■□□ 2.27
FOXN3-209ENST00000555353 FMN2Q9NZ56 1722 aa29.23■■■□□ 2.27
FOXN3-209ENST00000555353 MINK1Q8N4C8 1332 aaPredicted RBP29.23■■■□□ 2.27
FOXN3-209ENST00000555353 PHLPP1O60346 1717 aa29.22■■■□□ 2.27
FOXN3-209ENST00000555353 ZEB1P37275 1124 aaPredicted RBP29.22■■■□□ 2.27
FOXN3-209ENST00000555353 ADGRB2O60241 1585 aa29.21■■■□□ 2.27
FOXN3-209ENST00000555353 HIRIP3Q9BW71 556 aaPredicted RBP29.21■■■□□ 2.27
FOXN3-209ENST00000555353 NUTM2FA1L443 756 aa29.2■■■□□ 2.26
FOXN3-209ENST00000555353 RALGAPBQ86X10 1494 aa29.19■■■□□ 2.26
FOXN3-209ENST00000555353 GPRASP1Q5JY77 1395 aa29.18■■■□□ 2.26
FOXN3-209ENST00000555353 AHDC1Q5TGY3 1603 aaPredicted RBP29.17■■■□□ 2.26
FOXN3-209ENST00000555353 ORAI2Q96SN7 254 aa29.17■■■□□ 2.26
FOXN3-209ENST00000555353 CENPJQ9HC77 1338 aaPredicted RBP29.16■■■□□ 2.26
FOXN3-209ENST00000555353 ESCO1Q5FWF5 840 aa29.16■■■□□ 2.26
FOXN3-209ENST00000555353 CARD11Q9BXL7 1154 aa29.15■■■□□ 2.26
FOXN3-209ENST00000555353 EIF3AQ14152 1382 aaKnown RBP29.15■■■□□ 2.26
FOXN3-209ENST00000555353 NHSL1Q5SYE7 1610 aa29.14■■■□□ 2.26
FOXN3-209ENST00000555353 RGPD8O14715 1765 aaPredicted RBP29.13■■■□□ 2.25
FOXN3-209ENST00000555353 QRICH2Q9H0J4 1663 aa29.13■■■□□ 2.25
FOXN3-209ENST00000555353 COL16A1Q07092 1604 aaPredicted RBP29.12■■■□□ 2.25
FOXN3-209ENST00000555353 WASLO00401 505 aaPredicted RBP29.12■■■□□ 2.25
FOXN3-209ENST00000555353 ANKARQ7Z5J8 1434 aa29.09■■■□□ 2.25
FOXN3-209ENST00000555353 DDX17Q92841 729 aaKnown RBP29.08■■■□□ 2.25
FOXN3-209ENST00000555353 TULP4Q9NRJ4 1543 aa29.08■■■□□ 2.25
FOXN3-209ENST00000555353 KIF1AQ12756 1690 aa29.07■■■□□ 2.24
FOXN3-209ENST00000555353 USP32Q8NFA0 1604 aa29.07■■■□□ 2.24
FOXN3-209ENST00000555353 NPHP3Q7Z494 1330 aa29.05■■■□□ 2.24
FOXN3-209ENST00000555353 CDK19Q9BWU1 502 aa29.05■■■□□ 2.24
FOXN3-209ENST00000555353 JCADQ9P266 1359 aa29.04■■■□□ 2.24
FOXN3-209ENST00000555353 FOXO3O43524 673 aa29.03■■■□□ 2.24
FOXN3-209ENST00000555353 PHF8Q9UPP1 1060 aa29.03■■■□□ 2.24
FOXN3-209ENST00000555353 PRR36Q9H6K5 1346 aa29.01■■■□□ 2.23
FOXN3-209ENST00000555353 ITSN1Q15811 1721 aa29.01■■■□□ 2.23
FOXN3-209ENST00000555353 LRRC59Q96AG4 307 aaKnown RBP29.01■■■□□ 2.23
FOXN3-209ENST00000555353 SOS2Q07890 1332 aaPredicted RBP28.99■■■□□ 2.23
FOXN3-209ENST00000555353 SRPK2P78362 688 aaKnown RBP28.99■■■□□ 2.23
FOXN3-209ENST00000555353 NUDT16Q96DE0 195 aaKnown RBP28.99■■■□□ 2.23
FOXN3-209ENST00000555353 ATP7BP35670 1465 aa28.98■■■□□ 2.23
FOXN3-209ENST00000555353 EVC2Q86UK5 1308 aa28.97■■■□□ 2.23
FOXN3-209ENST00000555353 SHPRHQ149N8 1683 aa28.97■■■□□ 2.23
FOXN3-209ENST00000555353 PMFBP1Q8TBY8 1022 aa28.96■■■□□ 2.23
FOXN3-209ENST00000555353 XPCQ01831 940 aaPredicted RBP28.96■■■□□ 2.23
FOXN3-209ENST00000555353 PXDNQ92626 1479 aa28.95■■■□□ 2.22
FOXN3-209ENST00000555353 MED1Q15648 1581 aaPredicted RBP28.94■■■□□ 2.22
FOXN3-209ENST00000555353 SBNO2Q9Y2G9 1366 aa28.94■■■□□ 2.22
FOXN3-209ENST00000555353 CABP2Q9NPB3 220 aa28.93■■■□□ 2.22
FOXN3-209ENST00000555353 CCDC61Q9Y6R9 512 aa28.92■■■□□ 2.22
FOXN3-209ENST00000555353 PSME1Q06323 249 aa28.92■■■□□ 2.22
FOXN3-209ENST00000555353 TOPAZ1Q8N9V7 1692 aa28.91■■■□□ 2.22
FOXN3-209ENST00000555353 KRT28Q7Z3Y7 464 aa28.91■■■□□ 2.22
FOXN3-209ENST00000555353 SPATA31A6Q5VVP1 1343 aa28.91■■■□□ 2.22
FOXN3-209ENST00000555353 USP47Q96K76 1375 aa28.91■■■□□ 2.22
FOXN3-209ENST00000555353 NGDNQ8NEJ9 315 aaKnown RBP28.9■■■□□ 2.22
FOXN3-209ENST00000555353 ST20-MTHFSA0A0A6YYL1 179 aa28.89■■■□□ 2.22
FOXN3-209ENST00000555353 PNPLA6Q8IY17 1366 aa28.89■■■□□ 2.21
FOXN3-209ENST00000555353 DISP3Q9P2K9 1392 aa28.86■■■□□ 2.21
FOXN3-209ENST00000555353 PPIP5K1Q6PFW1 1433 aa28.85■■■□□ 2.21
FOXN3-209ENST00000555353 SLC24A1O60721 1099 aa28.84■■■□□ 2.21
FOXN3-209ENST00000555353 SPATA31A3Q5VYP0 1347 aa28.83■■■□□ 2.21
FOXN3-209ENST00000555353 PLEKHG3A1L390 1219 aa28.83■■■□□ 2.21
FOXN3-209ENST00000555353 NUTM2BA6NNL0 878 aaPredicted RBP28.83■■■□□ 2.21
FOXN3-209ENST00000555353 NUTM2EB1AL46 878 aaPredicted RBP28.83■■■□□ 2.21
FOXN3-209ENST00000555353 NUTM2AQ8IVF1 878 aaPredicted RBP28.83■■■□□ 2.21
FOXN3-209ENST00000555353 SBNO1A3KN83 1393 aa28.82■■■□□ 2.2
FOXN3-209ENST00000555353 ACEP12821 1306 aa28.81■■■□□ 2.2
FOXN3-209ENST00000555353 TESK2Q96S53 571 aa28.81■■■□□ 2.2
FOXN3-209ENST00000555353 PHF23Q9BUL5 403 aaPredicted RBP28.81■■■□□ 2.2
FOXN3-209ENST00000555353 ATAD2Q6PL18 1390 aa28.81■■■□□ 2.2
FOXN3-209ENST00000555353 TNS3Q68CZ2 1445 aa28.81■■■□□ 2.2
FOXN3-209ENST00000555353 POLR3AO14802 1390 aaPredicted RBP28.8■■■□□ 2.2
FOXN3-209ENST00000555353 COL22A1Q8NFW1 1626 aaPredicted RBP28.8■■■□□ 2.2
FOXN3-209ENST00000555353 CABP1Q9NZU7 370 aa28.79■■■□□ 2.2
FOXN3-209ENST00000555353 TRPM3Q9HCF6 1732 aaPredicted RBP28.79■■■□□ 2.2
FOXN3-209ENST00000555353 LMOD2Q6P5Q4 547 aa28.79■■■□□ 2.2
FOXN3-209ENST00000555353 LRP6O75581 1613 aa28.79■■■□□ 2.2
FOXN3-209ENST00000555353 MEX3CQ5U5Q3 659 aaKnown RBP28.78■■■□□ 2.2
FOXN3-209ENST00000555353 ARHGEF10O15013 1369 aa28.76■■■□□ 2.19
FOXN3-209ENST00000555353 PAK3O75914 559 aaPredicted RBP28.75■■■□□ 2.19
FOXN3-209ENST00000555353 TMF1P82094 1093 aa28.73■■■□□ 2.19
FOXN3-209ENST00000555353 EIF4G2P78344 907 aaKnown RBP eCLIP28.72■■■□□ 2.19
FOXN3-209ENST00000555353 PUS7Q96PZ0 661 aaKnown RBP28.72■■■□□ 2.19
FOXN3-209ENST00000555353 ALS2Q96Q42 1657 aa28.72■■■□□ 2.19
FOXN3-209ENST00000555353 ADAMTS2O95450 1211 aa28.69■■■□□ 2.18
FOXN3-209ENST00000555353 TMC1Q8TDI8 760 aa28.69■■■□□ 2.18
FOXN3-209ENST00000555353 PLEKHG5O94827 1062 aa28.67■■■□□ 2.18
FOXN3-209ENST00000555353 HAP1P54257 671 aaPredicted RBP28.67■■■□□ 2.18
FOXN3-209ENST00000555353 AKAP12Q02952 1782 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms