RNA–Protein interactions for RNA: ENST00000555227.1

LINC01578-205, Transcript of long intergenic non-protein coding RNA 1578, humanhuman

TSL 5

Gene LINC01578, Length 1,078 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01578-205ENST00000555227 KDM4AO75164 1064 aa11.65□□□□□ -0.54
LINC01578-205ENST00000555227 CTC1Q2NKJ3 1217 aa11.65□□□□□ -0.54
LINC01578-205ENST00000555227 GPCPD1Q9NPB8 672 aa11.65□□□□□ -0.54
LINC01578-205ENST00000555227 WFS1O76024 890 aa11.64□□□□□ -0.55
LINC01578-205ENST00000555227 USP46P62068 366 aa11.64□□□□□ -0.55
LINC01578-205ENST00000555227 THAP11Q96EK4 314 aa11.64□□□□□ -0.55
LINC01578-205ENST00000555227 TOR4AQ9NXH8 423 aa11.63□□□□□ -0.55
LINC01578-205ENST00000555227 STK17AQ9UEE5 414 aa11.63□□□□□ -0.55
LINC01578-205ENST00000555227 BRICD5Q6PL45 260 aa11.62□□□□□ -0.55
LINC01578-205ENST00000555227 FCF1Q9Y324 198 aaKnown RBP11.62□□□□□ -0.55
LINC01578-205ENST00000555227 AXIN1O15169 862 aa11.61□□□□□ -0.55
LINC01578-205ENST00000555227 SMCPP49901 116 aaPredicted RBP11.61□□□□□ -0.55
LINC01578-205ENST00000555227 MSS51Q4VC12 460 aa11.61□□□□□ -0.55
LINC01578-205ENST00000555227 CYP4X1Q8N118 509 aa11.6□□□□□ -0.55
LINC01578-205ENST00000555227 FAM160A2Q8N612 972 aaPredicted RBP11.6□□□□□ -0.55
LINC01578-205ENST00000555227 C11orf95C9JLR9 678 aaPredicted RBP11.59□□□□□ -0.55
LINC01578-205ENST00000555227 ZBTB24O43167 697 aaPredicted RBP11.59□□□□□ -0.55
LINC01578-205ENST00000555227 CD2BP2O95400 341 aaKnown RBP11.59□□□□□ -0.55
LINC01578-205ENST00000555227 RNF19BQ6ZMZ0 732 aa11.59□□□□□ -0.55
LINC01578-205ENST00000555227 NUTM1Q86Y26 1132 aa11.59□□□□□ -0.55
LINC01578-205ENST00000555227 GMPR2Q9P2T1 348 aaKnown RBP11.59□□□□□ -0.55
LINC01578-205ENST00000555227 WIPF1O43516 503 aa11.58□□□□□ -0.56
LINC01578-205ENST00000555227 FAM217BQ9NTX9 383 aaPredicted RBP11.58□□□□□ -0.56
LINC01578-205ENST00000555227 DACH1Q9UI36 760 aa11.58□□□□□ -0.56
LINC01578-205ENST00000555227 INSM1Q01101 510 aaPredicted RBP11.57□□□□□ -0.56
LINC01578-205ENST00000555227 PRDM9Q9NQV7 894 aa11.57□□□□□ -0.56
LINC01578-205ENST00000555227 NFX1Q12986 1120 aaKnown RBP11.56□□□□□ -0.56
LINC01578-205ENST00000555227 TTLL12Q14166 644 aaPredicted RBP11.56□□□□□ -0.56
LINC01578-205ENST00000555227 HOXA2O43364 376 aa11.55□□□□□ -0.56
LINC01578-205ENST00000555227 BARGINQ6ZT62 677 aa11.55□□□□□ -0.56
LINC01578-205ENST00000555227 USB1Q9BQ65 265 aaKnown RBP11.55□□□□□ -0.56
LINC01578-205ENST00000555227 ZMYND10O75800 440 aa11.53□□□□□ -0.56
LINC01578-205ENST00000555227 ZC3H15Q8WU90 426 aaKnown RBP11.53□□□□□ -0.56
LINC01578-205ENST00000555227 MMP16P51512 607 aa11.5□□□□□ -0.57
LINC01578-205ENST00000555227 SSTR3P32745 418 aaPredicted RBP11.49□□□□□ -0.57
LINC01578-205ENST00000555227 HLA-CQ95604 372 aa11.49□□□□□ -0.57
LINC01578-205ENST00000555227 TTC24A2A3L6 582 aaPredicted RBP11.48□□□□□ -0.57
LINC01578-205ENST00000555227 DXOO77932 396 aaKnown RBP11.47□□□□□ -0.57
LINC01578-205ENST00000555227 AMHR2Q16671 573 aa11.47□□□□□ -0.57
LINC01578-205ENST00000555227 CCDC24Q8N4L8 307 aa11.47□□□□□ -0.57
LINC01578-205ENST00000555227 GUCA2AQ02747 115 aa11.46□□□□□ -0.57
LINC01578-205ENST00000555227 WNT7AO00755 349 aa11.45□□□□□ -0.58
LINC01578-205ENST00000555227 FDX1P10109 184 aa11.45□□□□□ -0.58
LINC01578-205ENST00000555227 SENP2Q9HC62 589 aa11.45□□□□□ -0.58
LINC01578-205ENST00000555227 ATP13A2Q9NQ11 1180 aa11.45□□□□□ -0.58
LINC01578-205ENST00000555227 TRIM32Q13049 653 aa11.44□□□□□ -0.58
LINC01578-205ENST00000555227 GIGYF2Q6Y7W6 1299 aaKnown RBP11.44□□□□□ -0.58
LINC01578-205ENST00000555227 RETREG3Q86VR2 466 aa11.44□□□□□ -0.58
LINC01578-205ENST00000555227 SNIP1Q8TAD8 396 aaKnown RBP11.44□□□□□ -0.58
LINC01578-205ENST00000555227 REPIN1Q9BWE0 567 aaKnown RBP11.44□□□□□ -0.58
LINC01578-205ENST00000555227 C6orf229H3BNL8 230 aa11.43□□□□□ -0.58
LINC01578-205ENST00000555227 TERTO14746 1132 aaKnown RBP11.43□□□□□ -0.58
LINC01578-205ENST00000555227 TRIM47Q96LD4 638 aa11.43□□□□□ -0.58
LINC01578-205ENST00000555227 SMPD1P17405 629 aa11.42□□□□□ -0.58
LINC01578-205ENST00000555227 JUNDP17535 347 aa11.42□□□□□ -0.58
LINC01578-205ENST00000555227 SPIRE2Q8WWL2 714 aa11.41□□□□□ -0.58
LINC01578-205ENST00000555227 DIXDC1Q155Q3 683 aa11.4□□□□□ -0.58
LINC01578-205ENST00000555227 SYMPKQ92797 1274 aaKnown RBP11.4□□□□□ -0.58
LINC01578-205ENST00000555227 KIFC2Q96AC6 838 aa11.4□□□□□ -0.58
LINC01578-205ENST00000555227 AK7Q96M32 723 aa11.4□□□□□ -0.58
LINC01578-205ENST00000555227 SNRPBP14678 240 aaKnown RBP11.39□□□□□ -0.59
LINC01578-205ENST00000555227 BEGAINQ9BUH8 593 aa11.39□□□□□ -0.59
LINC01578-205ENST00000555227 LCE2CQ5TA81 110 aa11.38□□□□□ -0.59
LINC01578-205ENST00000555227 NUDT12Q9BQG2 462 aa11.37□□□□□ -0.59
LINC01578-205ENST00000555227 TRIM66O15016 1216 aa11.36□□□□□ -0.59
LINC01578-205ENST00000555227 MOXD2PA6NHM9 499 aa11.35□□□□□ -0.59
LINC01578-205ENST00000555227 MS4A1P11836 297 aa11.35□□□□□ -0.59
LINC01578-205ENST00000555227 NDUFV2P19404 249 aa11.35□□□□□ -0.59
LINC01578-205ENST00000555227 WNT7BP56706 349 aa11.35□□□□□ -0.59
LINC01578-205ENST00000555227 PARP9Q8IXQ6 854 aa11.35□□□□□ -0.59
LINC01578-205ENST00000555227 MRGPRX2Q96LB1 330 aa11.35□□□□□ -0.59
LINC01578-205ENST00000555227 PCDHGC3Q9UN70 934 aa11.35□□□□□ -0.59
LINC01578-205ENST00000555227 FAM181BA6NEQ2 426 aa11.34□□□□□ -0.59
LINC01578-205ENST00000555227 SPDYE5A6NIY4 337 aa11.34□□□□□ -0.59
LINC01578-205ENST00000555227 MTMR2Q13614 643 aa11.34□□□□□ -0.59
LINC01578-205ENST00000555227 J3QL48 77 aa11.32□□□□□ -0.6
LINC01578-205ENST00000555227 CCNYL3P0C7X3 344 aa11.32□□□□□ -0.6
LINC01578-205ENST00000555227 TBC1D2Q9BYX2 928 aa11.32□□□□□ -0.6
LINC01578-205ENST00000555227 GJA5P36382 358 aa11.31□□□□□ -0.6
LINC01578-205ENST00000555227 PTPRNQ16849 979 aa11.31□□□□□ -0.6
LINC01578-205ENST00000555227 PRR7Q8TB68 274 aa11.31□□□□□ -0.6
LINC01578-205ENST00000555227 RC3H1Q5TC82 1133 aaKnown RBP11.3□□□□□ -0.6
LINC01578-205ENST00000555227 SLC16A10Q8TF71 515 aa11.3□□□□□ -0.6
LINC01578-205ENST00000555227 HPS1Q92902 700 aa11.29□□□□□ -0.6
LINC01578-205ENST00000555227 RSBN1LQ6PCB5 846 aaPredicted RBP11.28□□□□□ -0.6
LINC01578-205ENST00000555227 PDE4DQ08499 809 aa11.27□□□□□ -0.61
LINC01578-205ENST00000555227 DESI1Q6ICB0 168 aa11.27□□□□□ -0.61
LINC01578-205ENST00000555227 EHBP1Q8NDI1 1231 aa11.27□□□□□ -0.61
LINC01578-205ENST00000555227 SKOR1P84550 965 aa11.26□□□□□ -0.61
LINC01578-205ENST00000555227 ZBTB3Q9H5J0 574 aa11.26□□□□□ -0.61
LINC01578-205ENST00000555227 NPAS3Q8IXF0 933 aa11.25□□□□□ -0.61
LINC01578-205ENST00000555227 SLC24A3Q9HC58 644 aa11.25□□□□□ -0.61
LINC01578-205ENST00000555227 PTCRAQ6ISU1 281 aaPredicted RBP11.24□□□□□ -0.61
LINC01578-205ENST00000555227 RIC3Q7Z5B4 369 aa11.24□□□□□ -0.61
LINC01578-205ENST00000555227 UNC93B1Q9H1C4 597 aa11.24□□□□□ -0.61
LINC01578-205ENST00000555227 EVA1BQ9NVM1 165 aa11.24□□□□□ -0.61
LINC01578-205ENST00000555227 SPTLC1O15269 473 aa11.23□□□□□ -0.61
LINC01578-205ENST00000555227 ALDH1A1P00352 501 aa11.23□□□□□ -0.61
LINC01578-205ENST00000555227 KCNH2Q12809 1159 aa11.23□□□□□ -0.61
LINC01578-205ENST00000555227 NXF1Q9UBU9 619 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms