RNA–Protein interactions for RNA: ENST00000555088.5

GSKIP-204, Transcript of GSK3B interacting protein, humanhuman

TSL 5

Gene GSKIP, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSKIP-204ENST00000555088 SETD1AO15047 1707 aaKnown RBP17.8■□□□□ 0.44
GSKIP-204ENST00000555088 FAM135BQ49AJ0 1406 aa17.8■□□□□ 0.44
GSKIP-204ENST00000555088 DLC1Q96QB1 1528 aa17.79■□□□□ 0.44
GSKIP-204ENST00000555088 NKTRP30414 1462 aaKnown RBP17.79■□□□□ 0.44
GSKIP-204ENST00000555088 NWD1Q149M9 1564 aa17.79■□□□□ 0.44
GSKIP-204ENST00000555088 EIF3AQ14152 1382 aaKnown RBP17.79■□□□□ 0.44
GSKIP-204ENST00000555088 STK26Q9P289 416 aa17.76■□□□□ 0.43
GSKIP-204ENST00000555088 NCOA3Q9Y6Q9 1424 aa17.75■□□□□ 0.43
GSKIP-204ENST00000555088 CPS1P31327 1500 aa17.75■□□□□ 0.43
GSKIP-204ENST00000555088 ROBO2Q9HCK4 1378 aa17.75■□□□□ 0.43
GSKIP-204ENST00000555088 ZNF335Q9H4Z2 1342 aaPredicted RBP17.74■□□□□ 0.43
GSKIP-204ENST00000555088 SLC24A1O60721 1099 aa17.74■□□□□ 0.43
GSKIP-204ENST00000555088 TRAK1Q9UPV9 953 aa17.74■□□□□ 0.43
GSKIP-204ENST00000555088 XRN1Q8IZH2 1706 aaKnown RBP17.74■□□□□ 0.43
GSKIP-204ENST00000555088 USP47Q96K76 1375 aa17.73■□□□□ 0.43
GSKIP-204ENST00000555088 EIF4G2P78344 907 aaKnown RBP eCLIP17.72■□□□□ 0.43
GSKIP-204ENST00000555088 CENPJQ9HC77 1338 aaPredicted RBP17.72■□□□□ 0.43
GSKIP-204ENST00000555088 SBNO2Q9Y2G9 1366 aa17.71■□□□□ 0.43
GSKIP-204ENST00000555088 PROSER2Q86WR7 435 aaPredicted RBP17.71■□□□□ 0.43
GSKIP-204ENST00000555088 PRAM1Q96QH2 718 aa17.71■□□□□ 0.43
GSKIP-204ENST00000555088 POGKQ9P215 609 aa17.71■□□□□ 0.43
GSKIP-204ENST00000555088 ZBTB12Q9Y330 459 aaPredicted RBP17.7■□□□□ 0.42
GSKIP-204ENST00000555088 KNDC1Q76NI1 1749 aa17.69■□□□□ 0.42
GSKIP-204ENST00000555088 TMEM94Q12767 1356 aa17.68■□□□□ 0.42
GSKIP-204ENST00000555088 LTBP4Q8N2S1 1624 aa17.68■□□□□ 0.42
GSKIP-204ENST00000555088 LRRC7Q96NW7 1537 aa17.67■□□□□ 0.42
GSKIP-204ENST00000555088 WAPLQ7Z5K2 1190 aa17.67■□□□□ 0.42
GSKIP-204ENST00000555088 CHD2O14647 1828 aaKnown RBP17.67■□□□□ 0.42
GSKIP-204ENST00000555088 PLEKHH1Q9ULM0 1364 aa17.66■□□□□ 0.42
GSKIP-204ENST00000555088 ST20-MTHFSA0A0A6YYL1 179 aa17.66■□□□□ 0.42
GSKIP-204ENST00000555088 ADGRL3Q9HAR2 1447 aa17.65■□□□□ 0.42
GSKIP-204ENST00000555088 CHRDL2Q6WN34 429 aa17.65■□□□□ 0.42
GSKIP-204ENST00000555088 HSPA5P11021 654 aaKnown RBP17.64■□□□□ 0.41
GSKIP-204ENST00000555088 TESK2Q96S53 571 aa17.64■□□□□ 0.41
GSKIP-204ENST00000555088 C19orf44Q9H6X5 657 aa17.64■□□□□ 0.41
GSKIP-204ENST00000555088 DCCP43146 1447 aa17.64■□□□□ 0.41
GSKIP-204ENST00000555088 IQSEC2Q5JU85 1478 aa17.62■□□□□ 0.41
GSKIP-204ENST00000555088 PUS7Q96PZ0 661 aaKnown RBP17.61■□□□□ 0.41
GSKIP-204ENST00000555088 ARHGEF28Q8N1W1 1705 aaKnown RBP17.61■□□□□ 0.41
GSKIP-204ENST00000555088 SAFB2Q14151 953 aaKnown RBP eCLIP17.6■□□□□ 0.41
GSKIP-204ENST00000555088 C14orf37Q86TY3 774 aa17.6■□□□□ 0.41
GSKIP-204ENST00000555088 EVC2Q86UK5 1308 aa17.6■□□□□ 0.41
GSKIP-204ENST00000555088 MSH6P52701 1360 aa17.6■□□□□ 0.41
GSKIP-204ENST00000555088 ADGRB2O60241 1585 aa17.6■□□□□ 0.41
GSKIP-204ENST00000555088 MINK1Q8N4C8 1332 aaPredicted RBP17.59■□□□□ 0.41
GSKIP-204ENST00000555088 CDCA8Q53HL2 280 aa17.59■□□□□ 0.41
GSKIP-204ENST00000555088 STRCP1A6NGW2 1772 aa17.58■□□□□ 0.41
GSKIP-204ENST00000555088 WASLO00401 505 aaPredicted RBP17.58■□□□□ 0.4
GSKIP-204ENST00000555088 TMF1P82094 1093 aa17.58■□□□□ 0.4
GSKIP-204ENST00000555088 CADPS2Q86UW7 1296 aa17.58■□□□□ 0.4
GSKIP-204ENST00000555088 CDC42BPGQ6DT37 1551 aa17.57■□□□□ 0.4
GSKIP-204ENST00000555088 ATF3P18847 181 aa17.56■□□□□ 0.4
GSKIP-204ENST00000555088 AKT1S1Q96B36 256 aa17.56■□□□□ 0.4
GSKIP-204ENST00000555088 RBM33Q96EV2 1170 aaKnown RBP17.56■□□□□ 0.4
GSKIP-204ENST00000555088 CERKQ8TCT0 537 aa17.55■□□□□ 0.4
GSKIP-204ENST00000555088 HIRIP3Q9BW71 556 aaPredicted RBP17.55■□□□□ 0.4
GSKIP-204ENST00000555088 ANKARQ7Z5J8 1434 aa17.55■□□□□ 0.4
GSKIP-204ENST00000555088 CDK19Q9BWU1 502 aa17.54■□□□□ 0.4
GSKIP-204ENST00000555088 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.53■□□□□ 0.4
GSKIP-204ENST00000555088 TULP4Q9NRJ4 1543 aa17.52■□□□□ 0.4
GSKIP-204ENST00000555088 ATXN8OSP0DMR3 200 aa17.52■□□□□ 0.4
GSKIP-204ENST00000555088 ATAD2Q6PL18 1390 aa17.52■□□□□ 0.39
GSKIP-204ENST00000555088 DISP3Q9P2K9 1392 aa17.52■□□□□ 0.39
GSKIP-204ENST00000555088 QRICH2Q9H0J4 1663 aa17.52■□□□□ 0.39
GSKIP-204ENST00000555088 SRPK2P78362 688 aaKnown RBP17.51■□□□□ 0.39
GSKIP-204ENST00000555088 NALCNQ8IZF0 1738 aa17.5■□□□□ 0.39
GSKIP-204ENST00000555088 MST1RQ04912 1400 aa17.49■□□□□ 0.39
GSKIP-204ENST00000555088 NUDT16Q96DE0 195 aaKnown RBP17.49■□□□□ 0.39
GSKIP-204ENST00000555088 SLAIN2Q9P270 581 aa17.49■□□□□ 0.39
GSKIP-204ENST00000555088 CCDC61Q9Y6R9 512 aa17.49■□□□□ 0.39
GSKIP-204ENST00000555088 NINLQ9Y2I6 1382 aa17.49■□□□□ 0.39
GSKIP-204ENST00000555088 TOM1O60784 492 aa17.48■□□□□ 0.39
GSKIP-204ENST00000555088 CABP2Q9NPB3 220 aa17.48■□□□□ 0.39
GSKIP-204ENST00000555088 ATP7BP35670 1465 aa17.47■□□□□ 0.39
GSKIP-204ENST00000555088 C1orf167Q5SNV9 1468 aa17.47■□□□□ 0.39
GSKIP-204ENST00000555088 PRR36Q9H6K5 1346 aa17.47■□□□□ 0.39
GSKIP-204ENST00000555088 PLEKHG3A1L390 1219 aa17.46■□□□□ 0.39
GSKIP-204ENST00000555088 KIF7Q2M1P5 1343 aa17.46■□□□□ 0.38
GSKIP-204ENST00000555088 CCDC7Q96M83 1385 aa17.45■□□□□ 0.38
GSKIP-204ENST00000555088 C11orf95C9JLR9 678 aaPredicted RBP17.45■□□□□ 0.38
GSKIP-204ENST00000555088 WASHC2AQ641Q2 1341 aa17.44■□□□□ 0.38
GSKIP-204ENST00000555088 ZNF316A6NFI3 1004 aaPredicted RBP17.43■□□□□ 0.38
GSKIP-204ENST00000555088 FMN2Q9NZ56 1722 aa17.43■□□□□ 0.38
GSKIP-204ENST00000555088 XIRP1Q702N8 1843 aaKnown RBP17.42■□□□□ 0.38
GSKIP-204ENST00000555088 PHF8Q9UPP1 1060 aa17.42■□□□□ 0.38
GSKIP-204ENST00000555088 PPIP5K1Q6PFW1 1433 aa17.41■□□□□ 0.38
GSKIP-204ENST00000555088 UBAP1LF5GYI3 381 aa17.41■□□□□ 0.38
GSKIP-204ENST00000555088 ESCO1Q5FWF5 840 aa17.41■□□□□ 0.38
GSKIP-204ENST00000555088 POLR3AO14802 1390 aaPredicted RBP17.4■□□□□ 0.38
GSKIP-204ENST00000555088 NUTM2FA1L443 756 aa17.4■□□□□ 0.38
GSKIP-204ENST00000555088 REM2Q8IYK8 340 aaPredicted RBP17.4■□□□□ 0.38
GSKIP-204ENST00000555088 TERF2IPQ9NYB0 399 aa17.4■□□□□ 0.38
GSKIP-204ENST00000555088 CABP1Q9NZU7 370 aa17.4■□□□□ 0.38
GSKIP-204ENST00000555088 BRINP3Q76B58 766 aa17.39■□□□□ 0.37
GSKIP-204ENST00000555088 ORAI2Q96SN7 254 aa17.39■□□□□ 0.37
GSKIP-204ENST00000555088 ZNF692Q9BU19 519 aaPredicted RBP17.39■□□□□ 0.37
GSKIP-204ENST00000555088 USP32Q8NFA0 1604 aa17.38■□□□□ 0.37
GSKIP-204ENST00000555088 BRD4O60885 1362 aaPredicted RBP17.38■□□□□ 0.37
GSKIP-204ENST00000555088 TMC1Q8TDI8 760 aa17.37■□□□□ 0.37
GSKIP-204ENST00000555088 SLC12A5Q9H2X9 1139 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms