RNA–Protein interactions for RNA: ENST00000554684.5

PPP4R3A-205, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4R3A, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-205ENST00000554684 FAM135AQ9P2D6 1515 aa20.53■□□□□ 0.88
PPP4R3A-205ENST00000554684 DNMT1P26358 1616 aaKnown RBP20.53■□□□□ 0.88
PPP4R3A-205ENST00000554684 COG6Q9Y2V7 657 aa20.53■□□□□ 0.88
PPP4R3A-205ENST00000554684 ABCA8O94911 1581 aa20.53■□□□□ 0.88
PPP4R3A-205ENST00000554684 RUNDC1Q96C34 613 aa20.52■□□□□ 0.88
PPP4R3A-205ENST00000554684 TSPOAP1O95153 1857 aa20.52■□□□□ 0.88
PPP4R3A-205ENST00000554684 DDRGK1Q96HY6 314 aa20.51■□□□□ 0.87
PPP4R3A-205ENST00000554684 WASLO00401 505 aaPredicted RBP20.51■□□□□ 0.87
PPP4R3A-205ENST00000554684 PRDM11Q9NQV5 511 aa20.5■□□□□ 0.87
PPP4R3A-205ENST00000554684 DISP3Q9P2K9 1392 aa20.5■□□□□ 0.87
PPP4R3A-205ENST00000554684 DNAJC5Q9H3Z4 198 aa20.5■□□□□ 0.87
PPP4R3A-205ENST00000554684 UHRF1BP1LA0JNW5 1464 aa20.5■□□□□ 0.87
PPP4R3A-205ENST00000554684 CHMP3Q9Y3E7 222 aa20.49■□□□□ 0.87
PPP4R3A-205ENST00000554684 NSD3Q9BZ95 1437 aa20.48■□□□□ 0.87
PPP4R3A-205ENST00000554684 ZNF692Q9BU19 519 aaPredicted RBP20.48■□□□□ 0.87
PPP4R3A-205ENST00000554684 CHMP4BQ9H444 224 aaKnown RBP20.48■□□□□ 0.87
PPP4R3A-205ENST00000554684 KCNA6P17658 529 aa20.47■□□□□ 0.87
PPP4R3A-205ENST00000554684 TAOK2Q9UL54 1235 aa20.47■□□□□ 0.87
PPP4R3A-205ENST00000554684 ADAMTS2O95450 1211 aa20.47■□□□□ 0.87
PPP4R3A-205ENST00000554684 LMOD3Q0VAK6 560 aa20.47■□□□□ 0.87
PPP4R3A-205ENST00000554684 NOP58Q9Y2X3 529 aaKnown RBP20.47■□□□□ 0.87
PPP4R3A-205ENST00000554684 EMILIN1Q9Y6C2 1016 aa20.47■□□□□ 0.87
PPP4R3A-205ENST00000554684 PHF8Q9UPP1 1060 aa20.47■□□□□ 0.87
PPP4R3A-205ENST00000554684 BECN1Q14457 450 aa20.46■□□□□ 0.87
PPP4R3A-205ENST00000554684 USHBP1Q8N6Y0 703 aa20.46■□□□□ 0.87
PPP4R3A-205ENST00000554684 DDX54Q8TDD1 881 aaKnown RBP20.46■□□□□ 0.87
PPP4R3A-205ENST00000554684 MBD5Q9P267 1494 aa20.45■□□□□ 0.86
PPP4R3A-205ENST00000554684 SHANK2Q9UPX8 1470 aa20.45■□□□□ 0.86
PPP4R3A-205ENST00000554684 RWDD1Q9H446 243 aaPredicted RBP20.45■□□□□ 0.86
PPP4R3A-205ENST00000554684 ATP7AQ04656 1500 aa20.44■□□□□ 0.86
PPP4R3A-205ENST00000554684 TOM1L2Q6ZVM7 507 aa20.44■□□□□ 0.86
PPP4R3A-205ENST00000554684 TSR2Q969E8 191 aaKnown RBP20.43■□□□□ 0.86
PPP4R3A-205ENST00000554684 THUMPD2Q9BTF0 503 aaKnown RBP20.43■□□□□ 0.86
PPP4R3A-205ENST00000554684 ZRANB1Q9UGI0 708 aa20.43■□□□□ 0.86
PPP4R3A-205ENST00000554684 PRAG1Q86YV5 1406 aa20.43■□□□□ 0.86
PPP4R3A-205ENST00000554684 ATAD2Q6PL18 1390 aa20.42■□□□□ 0.86
PPP4R3A-205ENST00000554684 TTC37Q6PGP7 1564 aa20.42■□□□□ 0.86
PPP4R3A-205ENST00000554684 TSPYL4Q9UJ04 414 aa20.42■□□□□ 0.86
PPP4R3A-205ENST00000554684 RIMS2Q9UQ26 1411 aa20.42■□□□□ 0.86
PPP4R3A-205ENST00000554684 ADGRL2O95490 1459 aa20.42■□□□□ 0.86
PPP4R3A-205ENST00000554684 ATP10AO60312 1499 aa20.41■□□□□ 0.86
PPP4R3A-205ENST00000554684 TTC5Q8N0Z6 440 aa20.41■□□□□ 0.86
PPP4R3A-205ENST00000554684 KDM6BO15054 1643 aa20.41■□□□□ 0.86
PPP4R3A-205ENST00000554684 TESK2Q96S53 571 aa20.4■□□□□ 0.86
PPP4R3A-205ENST00000554684 RALGAPBQ86X10 1494 aa20.4■□□□□ 0.86
PPP4R3A-205ENST00000554684 ACEP12821 1306 aa20.39■□□□□ 0.86
PPP4R3A-205ENST00000554684 MSH5O43196 834 aa20.39■□□□□ 0.86
PPP4R3A-205ENST00000554684 CHRNA2Q15822 529 aa20.39■□□□□ 0.86
PPP4R3A-205ENST00000554684 ZKSCAN2Q63HK3 967 aa20.39■□□□□ 0.86
PPP4R3A-205ENST00000554684 LTKP29376 864 aa20.39■□□□□ 0.85
PPP4R3A-205ENST00000554684 AIMP1Q12904 312 aaKnown RBP20.39■□□□□ 0.85
PPP4R3A-205ENST00000554684 PANK1Q8TE04 598 aa20.39■□□□□ 0.85
PPP4R3A-205ENST00000554684 SCAF11Q99590 1463 aaKnown RBP20.38■□□□□ 0.85
PPP4R3A-205ENST00000554684 CABLES1Q8TDN4 633 aa20.38■□□□□ 0.85
PPP4R3A-205ENST00000554684 DCTN1Q14203 1278 aa20.38■□□□□ 0.85
PPP4R3A-205ENST00000554684 GTF2E1P29083 439 aaPredicted RBP20.36■□□□□ 0.85
PPP4R3A-205ENST00000554684 MIS18AQ9NYP9 233 aa20.36■□□□□ 0.85
PPP4R3A-205ENST00000554684 ARHGEF12Q9NZN5 1544 aa20.36■□□□□ 0.85
PPP4R3A-205ENST00000554684 ZCCHC11Q5TAX3 1644 aaKnown RBP20.35■□□□□ 0.85
PPP4R3A-205ENST00000554684 BCAR3O75815 825 aa20.35■□□□□ 0.85
PPP4R3A-205ENST00000554684 KRT28Q7Z3Y7 464 aa20.34■□□□□ 0.85
PPP4R3A-205ENST00000554684 CENPQQ7L2Z9 268 aaPredicted RBP20.34■□□□□ 0.85
PPP4R3A-205ENST00000554684 FKBP5Q13451 457 aaPredicted RBP20.34■□□□□ 0.85
PPP4R3A-205ENST00000554684 SPRYD3Q8NCJ5 442 aa20.33■□□□□ 0.85
PPP4R3A-205ENST00000554684 KAT6BQ8WYB5 2073 aa20.33■□□□□ 0.84
PPP4R3A-205ENST00000554684 PDE4AP27815 886 aa20.32■□□□□ 0.84
PPP4R3A-205ENST00000554684 TPRNQ4KMQ1 711 aa20.32■□□□□ 0.84
PPP4R3A-205ENST00000554684 ZNF530Q6P9A1 599 aaPredicted RBP20.32■□□□□ 0.84
PPP4R3A-205ENST00000554684 NPATQ14207 1427 aa20.32■□□□□ 0.84
PPP4R3A-205ENST00000554684 NEO1Q92859 1461 aa20.31■□□□□ 0.84
PPP4R3A-205ENST00000554684 EXOSC9Q06265 439 aaKnown RBP20.31■□□□□ 0.84
PPP4R3A-205ENST00000554684 DDX17Q92841 729 aaKnown RBP20.31■□□□□ 0.84
PPP4R3A-205ENST00000554684 CASC1Q6TDU7 716 aa20.31■□□□□ 0.84
PPP4R3A-205ENST00000554684 SAMD9LQ8IVG5 1584 aa20.31■□□□□ 0.84
PPP4R3A-205ENST00000554684 PHF23Q9BUL5 403 aaPredicted RBP20.31■□□□□ 0.84
PPP4R3A-205ENST00000554684 DZIP1LQ8IYY4 767 aaKnown RBP20.3■□□□□ 0.84
PPP4R3A-205ENST00000554684 SMG6Q86US8 1419 aaKnown RBP20.29■□□□□ 0.84
PPP4R3A-205ENST00000554684 UBAP1LF5GYI3 381 aa20.29■□□□□ 0.84
PPP4R3A-205ENST00000554684 FAM177BA6PVY3 158 aa20.29■□□□□ 0.84
PPP4R3A-205ENST00000554684 RBM42Q9BTD8 480 aaKnown RBP20.29■□□□□ 0.84
PPP4R3A-205ENST00000554684 MCM10Q7L590 875 aa20.28■□□□□ 0.84
PPP4R3A-205ENST00000554684 CADPS2Q86UW7 1296 aa20.28■□□□□ 0.84
PPP4R3A-205ENST00000554684 ORAI2Q96SN7 254 aa20.28■□□□□ 0.84
PPP4R3A-205ENST00000554684 HSP90AB2PQ58FF8 381 aa20.28■□□□□ 0.84
PPP4R3A-205ENST00000554684 FYB1O15117 783 aa20.28■□□□□ 0.84
PPP4R3A-205ENST00000554684 AMER1Q5JTC6 1135 aaPredicted RBP20.28■□□□□ 0.84
PPP4R3A-205ENST00000554684 TAF7LQ5H9L4 462 aa20.27■□□□□ 0.84
PPP4R3A-205ENST00000554684 GNAI1P63096 354 aa20.26■□□□□ 0.83
PPP4R3A-205ENST00000554684 TATP17735 454 aaPredicted RBP20.26■□□□□ 0.83
PPP4R3A-205ENST00000554684 KCNJ4P48050 445 aa20.25■□□□□ 0.83
PPP4R3A-205ENST00000554684 MFAP1P55081 439 aaKnown RBP20.25■□□□□ 0.83
PPP4R3A-205ENST00000554684 CARD14Q9BXL6 1004 aa20.25■□□□□ 0.83
PPP4R3A-205ENST00000554684 MYO5CQ9NQX4 1742 aa20.25■□□□□ 0.83
PPP4R3A-205ENST00000554684 WWC1Q8IX03 1113 aa20.25■□□□□ 0.83
PPP4R3A-205ENST00000554684 PLEKHO1Q53GL0 409 aaPredicted RBP20.24■□□□□ 0.83
PPP4R3A-205ENST00000554684 GCC2Q8IWJ2 1684 aa20.24■□□□□ 0.83
PPP4R3A-205ENST00000554684 UGGT1Q9NYU2 1555 aa20.23■□□□□ 0.83
PPP4R3A-205ENST00000554684 PER1O15534 1290 aaPredicted RBP20.23■□□□□ 0.83
PPP4R3A-205ENST00000554684 ZFYVE16Q7Z3T8 1539 aa20.22■□□□□ 0.83
PPP4R3A-205ENST00000554684 IPO9Q96P70 1041 aaKnown RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms