RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 WWC1Q8IX03 1113 aa16.88■□□□□ 0.29
VTI1B-204ENST00000554659 TCP11L2Q8N4U5 519 aa16.88■□□□□ 0.29
VTI1B-204ENST00000554659 SMG6Q86US8 1419 aaKnown RBP16.88■□□□□ 0.29
VTI1B-204ENST00000554659 CCDC73Q6ZRK6 1079 aa16.88■□□□□ 0.29
VTI1B-204ENST00000554659 SCAPERQ9BY12 1400 aa16.87■□□□□ 0.29
VTI1B-204ENST00000554659 NINLQ9Y2I6 1382 aa16.87■□□□□ 0.29
VTI1B-204ENST00000554659 MTERF4Q7Z6M4 381 aaKnown RBP16.87■□□□□ 0.29
VTI1B-204ENST00000554659 MBD3O95983 291 aa16.87■□□□□ 0.29
VTI1B-204ENST00000554659 TRDNQ13061 729 aa16.87■□□□□ 0.29
VTI1B-204ENST00000554659 NECTIN2Q92692 538 aa16.87■□□□□ 0.29
VTI1B-204ENST00000554659 PDZRN3Q9UPQ7 1066 aa16.86■□□□□ 0.29
VTI1B-204ENST00000554659 MAP7D2Q96T17 732 aa16.86■□□□□ 0.29
VTI1B-204ENST00000554659 BACH2Q9BYV9 841 aa16.86■□□□□ 0.29
VTI1B-204ENST00000554659 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.86■□□□□ 0.29
VTI1B-204ENST00000554659 PCMTD1Q96MG8 357 aaPredicted RBP16.86■□□□□ 0.29
VTI1B-204ENST00000554659 HMOX1P09601 288 aa16.85■□□□□ 0.29
VTI1B-204ENST00000554659 MTHFSP49914 203 aa16.85■□□□□ 0.29
VTI1B-204ENST00000554659 GGNBP2Q9H3C7 697 aa16.85■□□□□ 0.29
VTI1B-204ENST00000554659 AKNAQ7Z591 1439 aa16.85■□□□□ 0.29
VTI1B-204ENST00000554659 LETM1O95202 739 aaPredicted RBP16.85■□□□□ 0.29
VTI1B-204ENST00000554659 CCDC47Q96A33 483 aaKnown RBP16.85■□□□□ 0.29
VTI1B-204ENST00000554659 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.85■□□□□ 0.29
VTI1B-204ENST00000554659 MCM2P49736 904 aa16.85■□□□□ 0.29
VTI1B-204ENST00000554659 IFT57Q9NWB7 429 aa16.85■□□□□ 0.29
VTI1B-204ENST00000554659 HFM1A2PYH4 1435 aa16.84■□□□□ 0.29
VTI1B-204ENST00000554659 G3V3G9 751 aa16.84■□□□□ 0.29
VTI1B-204ENST00000554659 RABEP1Q15276 862 aa16.84■□□□□ 0.29
VTI1B-204ENST00000554659 DCAF8Q5TAQ9 597 aa16.84■□□□□ 0.29
VTI1B-204ENST00000554659 GCC1Q96CN9 775 aa16.84■□□□□ 0.29
VTI1B-204ENST00000554659 ARGLU1Q9NWB6 273 aaPredicted RBP16.83■□□□□ 0.29
VTI1B-204ENST00000554659 PNISRQ8TF01 805 aaKnown RBP16.83■□□□□ 0.28
VTI1B-204ENST00000554659 UBTFL1P0CB47 393 aaPredicted RBP16.83■□□□□ 0.28
VTI1B-204ENST00000554659 PSMA5P28066 241 aa16.82■□□□□ 0.28
VTI1B-204ENST00000554659 R3HCC1Q9Y3T6 440 aaKnown RBP16.82■□□□□ 0.28
VTI1B-204ENST00000554659 APPP05067 770 aa16.82■□□□□ 0.28
VTI1B-204ENST00000554659 KIAA1107Q9UPP5 1409 aa16.82■□□□□ 0.28
VTI1B-204ENST00000554659 GNAI3P08754 354 aa16.81■□□□□ 0.28
VTI1B-204ENST00000554659 MNS1Q8NEH6 495 aa16.81■□□□□ 0.28
VTI1B-204ENST00000554659 NAT10Q9H0A0 1025 aaKnown RBP16.81■□□□□ 0.28
VTI1B-204ENST00000554659 CCDC173Q0VFZ6 552 aa16.81■□□□□ 0.28
VTI1B-204ENST00000554659 PRDM2Q13029 1718 aa16.81■□□□□ 0.28
VTI1B-204ENST00000554659 RRP12Q5JTH9 1297 aaKnown RBP16.81■□□□□ 0.28
VTI1B-204ENST00000554659 CNTROBQ8N137 903 aa16.81■□□□□ 0.28
VTI1B-204ENST00000554659 EFCAB5A4FU69 1503 aa16.81■□□□□ 0.28
VTI1B-204ENST00000554659 CAVIN1Q6NZI2 390 aaKnown RBP16.81■□□□□ 0.28
VTI1B-204ENST00000554659 AMOTL1Q8IY63 956 aa16.81■□□□□ 0.28
VTI1B-204ENST00000554659 CFTRP13569 1480 aa16.81■□□□□ 0.28
VTI1B-204ENST00000554659 CABP2Q9NPB3 220 aa16.8■□□□□ 0.28
VTI1B-204ENST00000554659 EHBP1L1Q8N3D4 1523 aa16.8■□□□□ 0.28
VTI1B-204ENST00000554659 CT47B1P0C2W7 299 aaPredicted RBP16.8■□□□□ 0.28
VTI1B-204ENST00000554659 EXOSC9Q06265 439 aaKnown RBP16.8■□□□□ 0.28
VTI1B-204ENST00000554659 BCL11BQ9C0K0 894 aaPredicted RBP16.79■□□□□ 0.28
VTI1B-204ENST00000554659 FBXO3Q9UK99 471 aa16.79■□□□□ 0.28
VTI1B-204ENST00000554659 BRPF3Q9ULD4 1205 aa16.79■□□□□ 0.28
VTI1B-204ENST00000554659 NFXL1Q6ZNB6 911 aa16.79■□□□□ 0.28
VTI1B-204ENST00000554659 SAFBQ15424 915 aaKnown RBP eCLIP16.79■□□□□ 0.28
VTI1B-204ENST00000554659 NOM1Q5C9Z4 860 aaKnown RBP16.79■□□□□ 0.28
VTI1B-204ENST00000554659 FBXW7Q969H0 707 aa16.79■□□□□ 0.28
VTI1B-204ENST00000554659 RUFY1Q96T51 708 aa16.79■□□□□ 0.28
VTI1B-204ENST00000554659 RNF214Q8ND24 703 aa16.78■□□□□ 0.28
VTI1B-204ENST00000554659 TSPY26PQ9H489 355 aa16.78■□□□□ 0.28
VTI1B-204ENST00000554659 ERICH2A1L162 156 aa16.78■□□□□ 0.28
VTI1B-204ENST00000554659 NBPF8Q3BBV2 869 aa16.78■□□□□ 0.28
VTI1B-204ENST00000554659 HSP90B2PQ58FF3 399 aa16.78■□□□□ 0.28
VTI1B-204ENST00000554659 NOL10Q9BSC4 688 aaKnown RBP16.77■□□□□ 0.28
VTI1B-204ENST00000554659 NEK4P51957 841 aa16.77■□□□□ 0.28
VTI1B-204ENST00000554659 RALYLQ86SE5 291 aaKnown RBP16.77■□□□□ 0.27
VTI1B-204ENST00000554659 ACBD3Q9H3P7 528 aa16.77■□□□□ 0.27
VTI1B-204ENST00000554659 CWC22Q9HCG8 908 aaKnown RBP16.77■□□□□ 0.27
VTI1B-204ENST00000554659 WDR63Q8IWG1 891 aa16.76■□□□□ 0.27
VTI1B-204ENST00000554659 BCAR3O75815 825 aa16.76■□□□□ 0.27
VTI1B-204ENST00000554659 PDCP20941 246 aa16.76■□□□□ 0.27
VTI1B-204ENST00000554659 CLASRPQ8N2M8 674 aaKnown RBP16.76■□□□□ 0.27
VTI1B-204ENST00000554659 AK7Q96M32 723 aa16.76■□□□□ 0.27
VTI1B-204ENST00000554659 PRPF40AO75400 957 aaKnown RBP16.76■□□□□ 0.27
VTI1B-204ENST00000554659 CFAP70Q5T0N1 1121 aa16.76■□□□□ 0.27
VTI1B-204ENST00000554659 CCDC30Q5VVM6 783 aa16.76■□□□□ 0.27
VTI1B-204ENST00000554659 CDR1P51861 262 aa16.75■□□□□ 0.27
VTI1B-204ENST00000554659 TMEM132EQ6IEE7 984 aa16.75■□□□□ 0.27
VTI1B-204ENST00000554659 SYNJ1O43426 1573 aa16.75■□□□□ 0.27
VTI1B-204ENST00000554659 NCAPD3P42695 1498 aa16.75■□□□□ 0.27
VTI1B-204ENST00000554659 HMGN5P82970 282 aaKnown RBP16.75■□□□□ 0.27
VTI1B-204ENST00000554659 TWISTNBQ3B726 338 aaPredicted RBP16.75■□□□□ 0.27
VTI1B-204ENST00000554659 PRKAR2BP31323 418 aa16.74■□□□□ 0.27
VTI1B-204ENST00000554659 PSME1Q06323 249 aa16.74■□□□□ 0.27
VTI1B-204ENST00000554659 OLFM4Q6UX06 510 aa16.74■□□□□ 0.27
VTI1B-204ENST00000554659 RIC3Q7Z5B4 369 aa16.74■□□□□ 0.27
VTI1B-204ENST00000554659 ARHGAP5Q13017 1502 aa16.74■□□□□ 0.27
VTI1B-204ENST00000554659 HIP1O00291 1037 aa16.74■□□□□ 0.27
VTI1B-204ENST00000554659 NBPF1Q3BBV0 1214 aa16.74■□□□□ 0.27
VTI1B-204ENST00000554659 NOB1Q9ULX3 412 aaKnown RBP16.74■□□□□ 0.27
VTI1B-204ENST00000554659 PRXQ9BXM0 1461 aa16.74■□□□□ 0.27
VTI1B-204ENST00000554659 SDF4Q9BRK5 362 aa16.74■□□□□ 0.27
VTI1B-204ENST00000554659 TIAM1Q13009 1591 aa16.74■□□□□ 0.27
VTI1B-204ENST00000554659 EVA1CP58658 441 aa16.74■□□□□ 0.27
VTI1B-204ENST00000554659 GAS2L2Q8NHY3 880 aa16.74■□□□□ 0.27
VTI1B-204ENST00000554659 FSD1Q9BTV5 496 aa16.73■□□□□ 0.27
VTI1B-204ENST00000554659 SURF6O75683 361 aaKnown RBP16.73■□□□□ 0.27
VTI1B-204ENST00000554659 FOSBP53539 338 aa16.73■□□□□ 0.27
VTI1B-204ENST00000554659 TRIM5Q9C035 493 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms