RNA–Protein interactions for RNA: ENST00000554131.5

PSEN1-210, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-210ENST00000554131 ZEB1P37275 1124 aaPredicted RBP26.13■■□□□ 1.77
PSEN1-210ENST00000554131 CENPJQ9HC77 1338 aaPredicted RBP26.13■■□□□ 1.77
PSEN1-210ENST00000554131 CDC42BPGQ6DT37 1551 aa26.12■■□□□ 1.77
PSEN1-210ENST00000554131 POGKQ9P215 609 aa26.12■■□□□ 1.77
PSEN1-210ENST00000554131 SAFB2Q14151 953 aaKnown RBP eCLIP26.11■■□□□ 1.77
PSEN1-210ENST00000554131 DCCP43146 1447 aa26.11■■□□□ 1.77
PSEN1-210ENST00000554131 C19orf44Q9H6X5 657 aa26.09■■□□□ 1.77
PSEN1-210ENST00000554131 SBNO2Q9Y2G9 1366 aa26.08■■□□□ 1.77
PSEN1-210ENST00000554131 MSH6P52701 1360 aa26.07■■□□□ 1.76
PSEN1-210ENST00000554131 FMN2Q9NZ56 1722 aa26.07■■□□□ 1.76
PSEN1-210ENST00000554131 TULP4Q9NRJ4 1543 aa26.07■■□□□ 1.76
PSEN1-210ENST00000554131 ST20-MTHFSA0A0A6YYL1 179 aa26.06■■□□□ 1.76
PSEN1-210ENST00000554131 MINK1Q8N4C8 1332 aaPredicted RBP26.06■■□□□ 1.76
PSEN1-210ENST00000554131 TESK2Q96S53 571 aa26.05■■□□□ 1.76
PSEN1-210ENST00000554131 C14orf37Q86TY3 774 aa26.04■■□□□ 1.76
PSEN1-210ENST00000554131 HIRIP3Q9BW71 556 aaPredicted RBP26.03■■□□□ 1.76
PSEN1-210ENST00000554131 USP32Q8NFA0 1604 aa26.03■■□□□ 1.76
PSEN1-210ENST00000554131 MST1RQ04912 1400 aa26.02■■□□□ 1.76
PSEN1-210ENST00000554131 HSPA5P11021 654 aaKnown RBP26.01■■□□□ 1.75
PSEN1-210ENST00000554131 EIF4G2P78344 907 aaKnown RBP eCLIP26■■□□□ 1.75
PSEN1-210ENST00000554131 WASLO00401 505 aaPredicted RBP25.98■■□□□ 1.75
PSEN1-210ENST00000554131 CADPS2Q86UW7 1296 aa25.98■■□□□ 1.75
PSEN1-210ENST00000554131 RGPD8O14715 1765 aaPredicted RBP25.97■■□□□ 1.75
PSEN1-210ENST00000554131 ATF3P18847 181 aa25.96■■□□□ 1.75
PSEN1-210ENST00000554131 ATP7BP35670 1465 aa25.95■■□□□ 1.74
PSEN1-210ENST00000554131 C1orf167Q5SNV9 1468 aa25.95■■□□□ 1.74
PSEN1-210ENST00000554131 PRR36Q9H6K5 1346 aa25.94■■□□□ 1.74
PSEN1-210ENST00000554131 TOPAZ1Q8N9V7 1692 aa25.94■■□□□ 1.74
PSEN1-210ENST00000554131 CDK19Q9BWU1 502 aa25.94■■□□□ 1.74
PSEN1-210ENST00000554131 ANKARQ7Z5J8 1434 aa25.93■■□□□ 1.74
PSEN1-210ENST00000554131 DISP3Q9P2K9 1392 aa25.93■■□□□ 1.74
PSEN1-210ENST00000554131 SLAIN2Q9P270 581 aa25.92■■□□□ 1.74
PSEN1-210ENST00000554131 EVC2Q86UK5 1308 aa25.91■■□□□ 1.74
PSEN1-210ENST00000554131 UBAP1LF5GYI3 381 aa25.9■■□□□ 1.74
PSEN1-210ENST00000554131 TOM1O60784 492 aa25.89■■□□□ 1.74
PSEN1-210ENST00000554131 ROBO1Q9Y6N7 1651 aa25.89■■□□□ 1.73
PSEN1-210ENST00000554131 NUTM2FA1L443 756 aa25.88■■□□□ 1.73
PSEN1-210ENST00000554131 CABP2Q9NPB3 220 aa25.88■■□□□ 1.73
PSEN1-210ENST00000554131 ITSN1Q15811 1721 aa25.88■■□□□ 1.73
PSEN1-210ENST00000554131 SLC24A1O60721 1099 aa25.86■■□□□ 1.73
PSEN1-210ENST00000554131 NUDT16Q96DE0 195 aaKnown RBP25.85■■□□□ 1.73
PSEN1-210ENST00000554131 C11orf95C9JLR9 678 aaPredicted RBP25.84■■□□□ 1.73
PSEN1-210ENST00000554131 SRPK2P78362 688 aaKnown RBP25.84■■□□□ 1.73
PSEN1-210ENST00000554131 BRINP3Q76B58 766 aa25.84■■□□□ 1.73
PSEN1-210ENST00000554131 PUS7Q96PZ0 661 aaKnown RBP25.84■■□□□ 1.73
PSEN1-210ENST00000554131 ORAI2Q96SN7 254 aa25.84■■□□□ 1.73
PSEN1-210ENST00000554131 KIF1AQ12756 1690 aa25.83■■□□□ 1.73
PSEN1-210ENST00000554131 TMF1P82094 1093 aa25.83■■□□□ 1.73
PSEN1-210ENST00000554131 NHSL1Q5SYE7 1610 aa25.82■■□□□ 1.72
PSEN1-210ENST00000554131 MYOM1P52179 1685 aa25.8■■□□□ 1.72
PSEN1-210ENST00000554131 ATAD2Q6PL18 1390 aa25.8■■□□□ 1.72
PSEN1-210ENST00000554131 CCDC61Q9Y6R9 512 aa25.79■■□□□ 1.72
PSEN1-210ENST00000554131 PPIP5K1Q6PFW1 1433 aa25.79■■□□□ 1.72
PSEN1-210ENST00000554131 AHDC1Q5TGY3 1603 aaPredicted RBP25.78■■□□□ 1.72
PSEN1-210ENST00000554131 PIP4K2BP78356 416 aa25.78■■□□□ 1.72
PSEN1-210ENST00000554131 ESCO1Q5FWF5 840 aa25.78■■□□□ 1.72
PSEN1-210ENST00000554131 PLEKHG3A1L390 1219 aa25.76■■□□□ 1.71
PSEN1-210ENST00000554131 PHF8Q9UPP1 1060 aa25.76■■□□□ 1.71
PSEN1-210ENST00000554131 CD163L1Q9NR16 1453 aa25.75■■□□□ 1.71
PSEN1-210ENST00000554131 POLR3AO14802 1390 aaPredicted RBP25.75■■□□□ 1.71
PSEN1-210ENST00000554131 FBXO41Q8TF61 875 aa25.74■■□□□ 1.71
PSEN1-210ENST00000554131 AKAP12Q02952 1782 aa25.74■■□□□ 1.71
PSEN1-210ENST00000554131 KIF7Q2M1P5 1343 aa25.73■■□□□ 1.71
PSEN1-210ENST00000554131 CDCA8Q53HL2 280 aa25.73■■□□□ 1.71
PSEN1-210ENST00000554131 PMFBP1Q8TBY8 1022 aa25.73■■□□□ 1.71
PSEN1-210ENST00000554131 CABP1Q9NZU7 370 aa25.73■■□□□ 1.71
PSEN1-210ENST00000554131 PXDNQ92626 1479 aa25.72■■□□□ 1.71
PSEN1-210ENST00000554131 DDX17Q92841 729 aaKnown RBP25.71■■□□□ 1.71
PSEN1-210ENST00000554131 CPSF1Q10570 1443 aaKnown RBP25.71■■□□□ 1.71
PSEN1-210ENST00000554131 COL16A1Q07092 1604 aaPredicted RBP25.7■■□□□ 1.71
PSEN1-210ENST00000554131 WASHC2AQ641Q2 1341 aa25.7■■□□□ 1.71
PSEN1-210ENST00000554131 SCAF1Q9H7N4 1312 aaKnown RBP25.7■■□□□ 1.71
PSEN1-210ENST00000554131 PHLPP1O60346 1717 aa25.7■■□□□ 1.7
PSEN1-210ENST00000554131 TRPM3Q9HCF6 1732 aaPredicted RBP25.7■■□□□ 1.7
PSEN1-210ENST00000554131 CCDC7Q96M83 1385 aa25.69■■□□□ 1.7
PSEN1-210ENST00000554131 NINLQ9Y2I6 1382 aa25.69■■□□□ 1.7
PSEN1-210ENST00000554131 SLC12A5Q9H2X9 1139 aa25.69■■□□□ 1.7
PSEN1-210ENST00000554131 MON2Q7Z3U7 1717 aa25.68■■□□□ 1.7
PSEN1-210ENST00000554131 ACEP12821 1306 aa25.68■■□□□ 1.7
PSEN1-210ENST00000554131 FOXO3O43524 673 aa25.68■■□□□ 1.7
PSEN1-210ENST00000554131 NRKQ7Z2Y5 1582 aa25.67■■□□□ 1.7
PSEN1-210ENST00000554131 SOS2Q07890 1332 aaPredicted RBP25.66■■□□□ 1.7
PSEN1-210ENST00000554131 NPHP3Q7Z494 1330 aa25.65■■□□□ 1.7
PSEN1-210ENST00000554131 SSH2Q76I76 1423 aa25.64■■□□□ 1.7
PSEN1-210ENST00000554131 NGDNQ8NEJ9 315 aaKnown RBP25.63■■□□□ 1.69
PSEN1-210ENST00000554131 TMC1Q8TDI8 760 aa25.63■■□□□ 1.69
PSEN1-210ENST00000554131 A0A1W2PP64 1363 aa25.63■■□□□ 1.69
PSEN1-210ENST00000554131 USP6P35125 1406 aa25.63■■□□□ 1.69
PSEN1-210ENST00000554131 ALS2Q96Q42 1657 aa25.61■■□□□ 1.69
PSEN1-210ENST00000554131 ANKRD36BQ8N2N9 1353 aa25.61■■□□□ 1.69
PSEN1-210ENST00000554131 HSPA1LP34931 641 aa25.61■■□□□ 1.69
PSEN1-210ENST00000554131 XPCQ01831 940 aaPredicted RBP25.61■■□□□ 1.69
PSEN1-210ENST00000554131 KRT28Q7Z3Y7 464 aa25.6■■□□□ 1.69
PSEN1-210ENST00000554131 POLR3GLQ9BT43 218 aa25.59■■□□□ 1.69
PSEN1-210ENST00000554131 SBNO1A3KN83 1393 aa25.58■■□□□ 1.69
PSEN1-210ENST00000554131 PSME1Q06323 249 aa25.58■■□□□ 1.69
PSEN1-210ENST00000554131 ZNF692Q9BU19 519 aaPredicted RBP25.57■■□□□ 1.68
PSEN1-210ENST00000554131 BRD4O60885 1362 aaPredicted RBP25.56■■□□□ 1.68
PSEN1-210ENST00000554131 KTN1Q86UP2 1357 aaKnown RBP25.56■■□□□ 1.68
PSEN1-210ENST00000554131 TERF2IPQ9NYB0 399 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms