RNA–Protein interactions for RNA: ENST00000553851.2

PRAF2-202, Transcript of PRA1 domain family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAF2, Length 1,334 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAF2-202ENST00000553851 PLEKHH1Q9ULM0 1364 aa29.53■■■□□ 2.32
PRAF2-202ENST00000553851 LRRC59Q96AG4 307 aaKnown RBP29.5■■■□□ 2.31
PRAF2-202ENST00000553851 SIRT1Q96EB6 747 aa29.5■■■□□ 2.31
PRAF2-202ENST00000553851 KNDC1Q76NI1 1749 aa29.5■■■□□ 2.31
PRAF2-202ENST00000553851 NHSL1Q5SYE7 1610 aa29.49■■■□□ 2.31
PRAF2-202ENST00000553851 STAC3Q96MF2 364 aa29.48■■■□□ 2.31
PRAF2-202ENST00000553851 LAMC1P11047 1609 aa29.48■■■□□ 2.31
PRAF2-202ENST00000553851 CDC42BPGQ6DT37 1551 aa29.46■■■□□ 2.31
PRAF2-202ENST00000553851 SHPRHQ149N8 1683 aa29.46■■■□□ 2.31
PRAF2-202ENST00000553851 ESCO1Q5FWF5 840 aa29.45■■■□□ 2.31
PRAF2-202ENST00000553851 MEX3CQ5U5Q3 659 aaKnown RBP29.45■■■□□ 2.31
PRAF2-202ENST00000553851 NUTM2FA1L443 756 aa29.45■■■□□ 2.3
PRAF2-202ENST00000553851 LRP6O75581 1613 aa29.44■■■□□ 2.3
PRAF2-202ENST00000553851 NUTM2BA6NNL0 878 aaPredicted RBP29.44■■■□□ 2.3
PRAF2-202ENST00000553851 NUTM2EB1AL46 878 aaPredicted RBP29.44■■■□□ 2.3
PRAF2-202ENST00000553851 POTEAQ6S8J7 498 aa29.44■■■□□ 2.3
PRAF2-202ENST00000553851 NUTM2AQ8IVF1 878 aaPredicted RBP29.44■■■□□ 2.3
PRAF2-202ENST00000553851 PRAM1Q96QH2 718 aa29.42■■■□□ 2.3
PRAF2-202ENST00000553851 SAFB2Q14151 953 aaKnown RBP eCLIP29.41■■■□□ 2.3
PRAF2-202ENST00000553851 SOS2Q07890 1332 aaPredicted RBP29.4■■■□□ 2.3
PRAF2-202ENST00000553851 POGKQ9P215 609 aa29.39■■■□□ 2.3
PRAF2-202ENST00000553851 TRAK1Q9UPV9 953 aa29.38■■■□□ 2.29
PRAF2-202ENST00000553851 ADGRB1O14514 1584 aa29.38■■■□□ 2.29
PRAF2-202ENST00000553851 PNPLA6Q8IY17 1366 aa29.37■■■□□ 2.29
PRAF2-202ENST00000553851 FOXO3O43524 673 aa29.35■■■□□ 2.29
PRAF2-202ENST00000553851 NPHP3Q7Z494 1330 aa29.34■■■□□ 2.29
PRAF2-202ENST00000553851 DLC1Q96QB1 1528 aa29.34■■■□□ 2.29
PRAF2-202ENST00000553851 FMN2Q9NZ56 1722 aa29.31■■■□□ 2.28
PRAF2-202ENST00000553851 XPCQ01831 940 aaPredicted RBP29.3■■■□□ 2.28
PRAF2-202ENST00000553851 ZNF772Q68DY9 489 aaPredicted RBP29.3■■■□□ 2.28
PRAF2-202ENST00000553851 PXDNQ92626 1479 aa29.25■■■□□ 2.27
PRAF2-202ENST00000553851 HIRIP3Q9BW71 556 aaPredicted RBP29.25■■■□□ 2.27
PRAF2-202ENST00000553851 MINK1Q8N4C8 1332 aaPredicted RBP29.25■■■□□ 2.27
PRAF2-202ENST00000553851 C8orf37Q96NL8 207 aa29.24■■■□□ 2.27
PRAF2-202ENST00000553851 PHF8Q9UPP1 1060 aa29.24■■■□□ 2.27
PRAF2-202ENST00000553851 ADAMTS2O95450 1211 aa29.23■■■□□ 2.27
PRAF2-202ENST00000553851 SIN3AQ96ST3 1273 aa29.23■■■□□ 2.27
PRAF2-202ENST00000553851 AFF2P51816 1311 aa29.23■■■□□ 2.27
PRAF2-202ENST00000553851 KRT28Q7Z3Y7 464 aa29.2■■■□□ 2.27
PRAF2-202ENST00000553851 RGPD8O14715 1765 aaPredicted RBP29.2■■■□□ 2.26
PRAF2-202ENST00000553851 L3MBTL2Q969R5 705 aa29.2■■■□□ 2.26
PRAF2-202ENST00000553851 KIF1AQ12756 1690 aa29.19■■■□□ 2.26
PRAF2-202ENST00000553851 NEUROD1Q13562 356 aa29.19■■■□□ 2.26
PRAF2-202ENST00000553851 NBPF1Q3BBV0 1214 aa29.19■■■□□ 2.26
PRAF2-202ENST00000553851 ADGRB2O60241 1585 aa29.18■■■□□ 2.26
PRAF2-202ENST00000553851 WASLO00401 505 aaPredicted RBP29.18■■■□□ 2.26
PRAF2-202ENST00000553851 NGLY1Q96IV0 654 aa29.18■■■□□ 2.26
PRAF2-202ENST00000553851 ANKARQ7Z5J8 1434 aa29.17■■■□□ 2.26
PRAF2-202ENST00000553851 PMFBP1Q8TBY8 1022 aa29.16■■■□□ 2.26
PRAF2-202ENST00000553851 SPATA31A3Q5VYP0 1347 aa29.15■■■□□ 2.26
PRAF2-202ENST00000553851 PSME1Q06323 249 aa29.15■■■□□ 2.26
PRAF2-202ENST00000553851 TRIM26Q12899 539 aaPredicted RBP29.15■■■□□ 2.26
PRAF2-202ENST00000553851 KIAA1210Q9ULL0 1709 aa29.15■■■□□ 2.26
PRAF2-202ENST00000553851 COL22A1Q8NFW1 1626 aaPredicted RBP29.14■■■□□ 2.26
PRAF2-202ENST00000553851 RXRBP28702 533 aa29.14■■■□□ 2.25
PRAF2-202ENST00000553851 EIF3AQ14152 1382 aaKnown RBP29.13■■■□□ 2.25
PRAF2-202ENST00000553851 ARHGEF28Q8N1W1 1705 aaKnown RBP29.13■■■□□ 2.25
PRAF2-202ENST00000553851 PRR36Q9H6K5 1346 aa29.12■■■□□ 2.25
PRAF2-202ENST00000553851 USP32Q8NFA0 1604 aa29.12■■■□□ 2.25
PRAF2-202ENST00000553851 QTRT2Q9H974 415 aaKnown RBP29.11■■■□□ 2.25
PRAF2-202ENST00000553851 TULP4Q9NRJ4 1543 aa29.08■■■□□ 2.25
PRAF2-202ENST00000553851 USP21Q9UK80 565 aa29.07■■■□□ 2.24
PRAF2-202ENST00000553851 SBNO1A3KN83 1393 aa29.06■■■□□ 2.24
PRAF2-202ENST00000553851 FNBP4Q8N3X1 1017 aaPredicted RBP29.06■■■□□ 2.24
PRAF2-202ENST00000553851 LMOD2Q6P5Q4 547 aa29.05■■■□□ 2.24
PRAF2-202ENST00000553851 NUDT16Q96DE0 195 aaKnown RBP29.05■■■□□ 2.24
PRAF2-202ENST00000553851 CDK19Q9BWU1 502 aa29.05■■■□□ 2.24
PRAF2-202ENST00000553851 TNS3Q68CZ2 1445 aa29.05■■■□□ 2.24
PRAF2-202ENST00000553851 RBM6P78332 1123 aaKnown RBP29.03■■■□□ 2.24
PRAF2-202ENST00000553851 NGDNQ8NEJ9 315 aaKnown RBP29.02■■■□□ 2.24
PRAF2-202ENST00000553851 GPRASP1Q5JY77 1395 aa29.02■■■□□ 2.24
PRAF2-202ENST00000553851 PLEKHG5O94827 1062 aa29.01■■■□□ 2.23
PRAF2-202ENST00000553851 CABLES1Q8TDN4 633 aa29■■■□□ 2.23
PRAF2-202ENST00000553851 HAP1P54257 671 aaPredicted RBP28.99■■■□□ 2.23
PRAF2-202ENST00000553851 TRPC5Q9UL62 973 aaPredicted RBP28.99■■■□□ 2.23
PRAF2-202ENST00000553851 CENPJQ9HC77 1338 aaPredicted RBP28.99■■■□□ 2.23
PRAF2-202ENST00000553851 ARHGEF10O15013 1369 aa28.99■■■□□ 2.23
PRAF2-202ENST00000553851 CDK12Q9NYV4 1490 aaPredicted RBP28.98■■■□□ 2.23
PRAF2-202ENST00000553851 ATP7BP35670 1465 aa28.97■■■□□ 2.23
PRAF2-202ENST00000553851 MARF1Q9Y4F3 1742 aaKnown RBP28.95■■■□□ 2.22
PRAF2-202ENST00000553851 CCDC61Q9Y6R9 512 aa28.94■■■□□ 2.22
PRAF2-202ENST00000553851 BCL9LQ86UU0 1499 aa28.93■■■□□ 2.22
PRAF2-202ENST00000553851 ROCK2O75116 1388 aaKnown RBP28.93■■■□□ 2.22
PRAF2-202ENST00000553851 PAK3O75914 559 aaPredicted RBP28.93■■■□□ 2.22
PRAF2-202ENST00000553851 NBPF8Q3BBV2 869 aa28.93■■■□□ 2.22
PRAF2-202ENST00000553851 TRPM1Q7Z4N2 1603 aa28.92■■■□□ 2.22
PRAF2-202ENST00000553851 ATRNO75882 1429 aa28.92■■■□□ 2.22
PRAF2-202ENST00000553851 SRPK2P78362 688 aaKnown RBP28.92■■■□□ 2.22
PRAF2-202ENST00000553851 TRPM3Q9HCF6 1732 aaPredicted RBP28.91■■■□□ 2.22
PRAF2-202ENST00000553851 RGS12O14924 1447 aa28.9■■■□□ 2.22
PRAF2-202ENST00000553851 ITSN1Q15811 1721 aa28.9■■■□□ 2.22
PRAF2-202ENST00000553851 PLEKHG3A1L390 1219 aa28.89■■■□□ 2.21
PRAF2-202ENST00000553851 UNC5CLQ8IV45 518 aa28.89■■■□□ 2.21
PRAF2-202ENST00000553851 CABP2Q9NPB3 220 aa28.89■■■□□ 2.21
PRAF2-202ENST00000553851 ACEP12821 1306 aa28.88■■■□□ 2.21
PRAF2-202ENST00000553851 TONSLQ96HA7 1378 aa28.87■■■□□ 2.21
PRAF2-202ENST00000553851 SLIT2O94813 1529 aa28.87■■■□□ 2.21
PRAF2-202ENST00000553851 POLR3AO14802 1390 aaPredicted RBP28.86■■■□□ 2.21
PRAF2-202ENST00000553851 ALS2Q96Q42 1657 aa28.85■■■□□ 2.21
PRAF2-202ENST00000553851 QRICH2Q9H0J4 1663 aa28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms