RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 PPP4R3BQ5MIZ7 849 aa5.59□□□□□ -1.51
RDH11-204ENST00000553578 POLR1AO95602 1720 aaPredicted RBP5.59□□□□□ -1.51
RDH11-204ENST00000553578 VARS2Q5ST30 1063 aaKnown RBP5.59□□□□□ -1.51
RDH11-204ENST00000553578 LHX6Q9UPM6 363 aa5.59□□□□□ -1.51
RDH11-204ENST00000553578 DENND4BO75064 1496 aaPredicted RBP5.59□□□□□ -1.51
RDH11-204ENST00000553578 KIF14Q15058 1648 aa5.59□□□□□ -1.52
RDH11-204ENST00000553578 ABCA9Q8IUA7 1624 aa5.59□□□□□ -1.52
RDH11-204ENST00000553578 TROQ12816 1431 aaPredicted RBP5.59□□□□□ -1.52
RDH11-204ENST00000553578 UNC13BO14795 1591 aa5.59□□□□□ -1.52
RDH11-204ENST00000553578 DEPDC5O75140 1603 aa5.58□□□□□ -1.52
RDH11-204ENST00000553578 SMYD5Q6GMV2 418 aa5.58□□□□□ -1.52
RDH11-204ENST00000553578 GRXCR2A6NFK2 248 aa5.58□□□□□ -1.52
RDH11-204ENST00000553578 FGD1P98174 961 aa5.58□□□□□ -1.52
RDH11-204ENST00000553578 ZMYND15Q9H091 742 aa5.58□□□□□ -1.52
RDH11-204ENST00000553578 DHX57Q6P158 1386 aaKnown RBP5.58□□□□□ -1.52
RDH11-204ENST00000553578 PDIA6Q15084 440 aa5.58□□□□□ -1.52
RDH11-204ENST00000553578 POTEGQ6S5H5 508 aa5.58□□□□□ -1.52
RDH11-204ENST00000553578 ARIH1Q9Y4X5 557 aaPredicted RBP5.58□□□□□ -1.52
RDH11-204ENST00000553578 KANK4Q5T7N3 995 aaPredicted RBP5.58□□□□□ -1.52
RDH11-204ENST00000553578 DDX12PQ92771 950 aa5.58□□□□□ -1.52
RDH11-204ENST00000553578 ZCCHC11Q5TAX3 1644 aaKnown RBP5.57□□□□□ -1.52
RDH11-204ENST00000553578 CARMIL2Q6F5E8 1435 aa5.57□□□□□ -1.52
RDH11-204ENST00000553578 PTPRGP23470 1445 aa5.57□□□□□ -1.52
RDH11-204ENST00000553578 POTEMA6NI47 508 aa5.57□□□□□ -1.52
RDH11-204ENST00000553578 MYO5CQ9NQX4 1742 aa5.57□□□□□ -1.52
RDH11-204ENST00000553578 ATP10BO94823 1461 aa5.57□□□□□ -1.52
RDH11-204ENST00000553578 ZNF428Q96B54 188 aa5.57□□□□□ -1.52
RDH11-204ENST00000553578 HS3ST6Q96QI5 342 aa5.56□□□□□ -1.52
RDH11-204ENST00000553578 GZF1Q9H116 711 aaPredicted RBP5.56□□□□□ -1.52
RDH11-204ENST00000553578 GPATCH8Q9UKJ3 1502 aaKnown RBP5.56□□□□□ -1.52
RDH11-204ENST00000553578 NAIPQ13075 1403 aa5.56□□□□□ -1.52
RDH11-204ENST00000553578 PTPRKQ15262 1439 aa5.56□□□□□ -1.52
RDH11-204ENST00000553578 EIF2AK4Q9P2K8 1649 aaKnown RBP5.56□□□□□ -1.52
RDH11-204ENST00000553578 TAF7LQ5H9L4 462 aa5.56□□□□□ -1.52
RDH11-204ENST00000553578 TYW1BQ6NUM6 668 aa5.56□□□□□ -1.52
RDH11-204ENST00000553578 EPAS1Q99814 870 aa5.56□□□□□ -1.52
RDH11-204ENST00000553578 KIAA1107Q9UPP5 1409 aa5.56□□□□□ -1.52
RDH11-204ENST00000553578 DHX37Q8IY37 1157 aaKnown RBP5.55□□□□□ -1.52
RDH11-204ENST00000553578 JPH4Q96JJ6 628 aa5.55□□□□□ -1.52
RDH11-204ENST00000553578 ZNF777Q9ULD5 760 aaPredicted RBP5.55□□□□□ -1.52
RDH11-204ENST00000553578 UACAQ9BZF9 1416 aa5.55□□□□□ -1.52
RDH11-204ENST00000553578 SETD5Q9C0A6 1442 aa5.55□□□□□ -1.52
RDH11-204ENST00000553578 VWDEQ8N2E2 1590 aa5.55□□□□□ -1.52
RDH11-204ENST00000553578 MBD5Q9P267 1494 aa5.55□□□□□ -1.52
RDH11-204ENST00000553578 LAMC1P11047 1609 aa5.55□□□□□ -1.52
RDH11-204ENST00000553578 ZDHHC16Q969W1 377 aa5.55□□□□□ -1.52
RDH11-204ENST00000553578 CDK13Q14004 1512 aaKnown RBP5.55□□□□□ -1.52
RDH11-204ENST00000553578 SAMD9LQ8IVG5 1584 aa5.54□□□□□ -1.52
RDH11-204ENST00000553578 PHF14O94880 888 aa5.54□□□□□ -1.52
RDH11-204ENST00000553578 RBM10P98175 930 aaKnown RBP5.54□□□□□ -1.52
RDH11-204ENST00000553578 ATP10AO60312 1499 aa5.54□□□□□ -1.52
RDH11-204ENST00000553578 RBM33Q96EV2 1170 aaKnown RBP5.54□□□□□ -1.52
RDH11-204ENST00000553578 GLI2P10070 1586 aa5.54□□□□□ -1.52
RDH11-204ENST00000553578 MAP3K7O43318 606 aa5.54□□□□□ -1.52
RDH11-204ENST00000553578 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.54□□□□□ -1.52
RDH11-204ENST00000553578 FOSBP53539 338 aa5.53□□□□□ -1.52
RDH11-204ENST00000553578 IQGAP3Q86VI3 1631 aa5.53□□□□□ -1.52
RDH11-204ENST00000553578 CFAP74Q9C0B2 1584 aa5.53□□□□□ -1.52
RDH11-204ENST00000553578 TEX14Q8IWB6 1497 aa5.53□□□□□ -1.52
RDH11-204ENST00000553578 SEMA3EO15041 775 aa5.53□□□□□ -1.52
RDH11-204ENST00000553578 INO80Q9ULG1 1556 aaPredicted RBP5.53□□□□□ -1.52
RDH11-204ENST00000553578 LCE2DQ5TA82 110 aaPredicted RBP5.53□□□□□ -1.52
RDH11-204ENST00000553578 CCDC82Q8N4S0 544 aa5.53□□□□□ -1.52
RDH11-204ENST00000553578 DAPK1P53355 1430 aa5.53□□□□□ -1.52
RDH11-204ENST00000553578 HSP90B1P14625 803 aaKnown RBP5.52□□□□□ -1.53
RDH11-204ENST00000553578 CCER1Q8TC90 406 aaPredicted RBP5.52□□□□□ -1.53
RDH11-204ENST00000553578 SUPT16HQ9Y5B9 1047 aaKnown RBP5.52□□□□□ -1.53
RDH11-204ENST00000553578 PTPREP23469 700 aa5.52□□□□□ -1.53
RDH11-204ENST00000553578 TTC37Q6PGP7 1564 aa5.52□□□□□ -1.53
RDH11-204ENST00000553578 ABCC5O15440 1437 aa5.52□□□□□ -1.53
RDH11-204ENST00000553578 PBX2P40425 430 aa5.52□□□□□ -1.53
RDH11-204ENST00000553578 PTGER2P43116 358 aa5.52□□□□□ -1.53
RDH11-204ENST00000553578 ZNF687Q8N1G0 1237 aa5.52□□□□□ -1.53
RDH11-204ENST00000553578 KDM6BO15054 1643 aa5.52□□□□□ -1.53
RDH11-204ENST00000553578 CAMSAP2Q08AD1 1489 aa5.52□□□□□ -1.53
RDH11-204ENST00000553578 PLB1Q6P1J6 1458 aa5.52□□□□□ -1.53
RDH11-204ENST00000553578 PLEKHH2Q8IVE3 1493 aa5.52□□□□□ -1.53
RDH11-204ENST00000553578 ABCC1P33527 1531 aa5.52□□□□□ -1.53
RDH11-204ENST00000553578 RFX1P22670 979 aa5.51□□□□□ -1.53
RDH11-204ENST00000553578 AAMPQ13685 434 aa5.51□□□□□ -1.53
RDH11-204ENST00000553578 PCDHGA10Q9Y5H3 936 aa5.51□□□□□ -1.53
RDH11-204ENST00000553578 STAC3Q96MF2 364 aa5.51□□□□□ -1.53
RDH11-204ENST00000553578 KCNK17Q96T54 332 aa5.51□□□□□ -1.53
RDH11-204ENST00000553578 MTMR7Q9Y216 660 aa5.51□□□□□ -1.53
RDH11-204ENST00000553578 FAM135AQ9P2D6 1515 aa5.51□□□□□ -1.53
RDH11-204ENST00000553578 TTLL12Q14166 644 aaPredicted RBP5.51□□□□□ -1.53
RDH11-204ENST00000553578 CDAN1Q8IWY9 1227 aa5.51□□□□□ -1.53
RDH11-204ENST00000553578 ERCC6L2Q5T890 1561 aa5.51□□□□□ -1.53
RDH11-204ENST00000553578 KDM5CP41229 1560 aa5.51□□□□□ -1.53
RDH11-204ENST00000553578 KDM4FA0A1W2PPD8 638 aa5.51□□□□□ -1.53
RDH11-204ENST00000553578 NUTM2FA1L443 756 aa5.51□□□□□ -1.53
RDH11-204ENST00000553578 RNF17Q9BXT8 1623 aaKnown RBP5.51□□□□□ -1.53
RDH11-204ENST00000553578 MAP3K4Q9Y6R4 1608 aa5.5□□□□□ -1.53
RDH11-204ENST00000553578 RTEL1-TNFRSF6BF6WH68 1400 aa5.5□□□□□ -1.53
RDH11-204ENST00000553578 REREQ9P2R6 1566 aa5.5□□□□□ -1.53
RDH11-204ENST00000553578 E9PSI1 815 aa5.5□□□□□ -1.53
RDH11-204ENST00000553578 MLLT3P42568 568 aaPredicted RBP5.5□□□□□ -1.53
RDH11-204ENST00000553578 CHMP4AQ9BY43 222 aa5.5□□□□□ -1.53
RDH11-204ENST00000553578 RBM19Q9Y4C8 960 aaKnown RBP5.5□□□□□ -1.53
RDH11-204ENST00000553578 ARHGAP33O14559 1287 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms