RNA–Protein interactions for RNA: ENST00000553343.5

SDR39U1-204, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-204ENST00000553343 CDC42BPGQ6DT37 1551 aa28.95■■■□□ 2.22
SDR39U1-204ENST00000553343 NALCNQ8IZF0 1738 aa28.94■■■□□ 2.22
SDR39U1-204ENST00000553343 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.92■■■□□ 2.22
SDR39U1-204ENST00000553343 MSH6P52701 1360 aa28.91■■■□□ 2.22
SDR39U1-204ENST00000553343 PLEKHH1Q9ULM0 1364 aa28.91■■■□□ 2.22
SDR39U1-204ENST00000553343 EIF4G2P78344 907 aaKnown RBP eCLIP28.91■■■□□ 2.22
SDR39U1-204ENST00000553343 WAPLQ7Z5K2 1190 aa28.9■■■□□ 2.22
SDR39U1-204ENST00000553343 C19orf44Q9H6X5 657 aa28.9■■■□□ 2.22
SDR39U1-204ENST00000553343 C14orf37Q86TY3 774 aa28.85■■■□□ 2.21
SDR39U1-204ENST00000553343 CERKQ8TCT0 537 aa28.84■■■□□ 2.21
SDR39U1-204ENST00000553343 ST20-MTHFSA0A0A6YYL1 179 aa28.83■■■□□ 2.21
SDR39U1-204ENST00000553343 CADPS2Q86UW7 1296 aa28.83■■■□□ 2.21
SDR39U1-204ENST00000553343 FMN2Q9NZ56 1722 aa28.81■■■□□ 2.2
SDR39U1-204ENST00000553343 ANKARQ7Z5J8 1434 aa28.79■■■□□ 2.2
SDR39U1-204ENST00000553343 EVC2Q86UK5 1308 aa28.79■■■□□ 2.2
SDR39U1-204ENST00000553343 SAFB2Q14151 953 aaKnown RBP eCLIP28.79■■■□□ 2.2
SDR39U1-204ENST00000553343 PUS7Q96PZ0 661 aaKnown RBP28.79■■■□□ 2.2
SDR39U1-204ENST00000553343 TESK2Q96S53 571 aa28.79■■■□□ 2.2
SDR39U1-204ENST00000553343 MINK1Q8N4C8 1332 aaPredicted RBP28.78■■■□□ 2.2
SDR39U1-204ENST00000553343 ATF3P18847 181 aa28.78■■■□□ 2.2
SDR39U1-204ENST00000553343 TULP4Q9NRJ4 1543 aa28.78■■■□□ 2.2
SDR39U1-204ENST00000553343 WASLO00401 505 aaPredicted RBP28.77■■■□□ 2.2
SDR39U1-204ENST00000553343 HSPA5P11021 654 aaKnown RBP28.77■■■□□ 2.2
SDR39U1-204ENST00000553343 RBM33Q96EV2 1170 aaKnown RBP28.76■■■□□ 2.19
SDR39U1-204ENST00000553343 TMF1P82094 1093 aa28.74■■■□□ 2.19
SDR39U1-204ENST00000553343 CDCA8Q53HL2 280 aa28.74■■■□□ 2.19
SDR39U1-204ENST00000553343 MST1RQ04912 1400 aa28.73■■■□□ 2.19
SDR39U1-204ENST00000553343 TOM1O60784 492 aa28.72■■■□□ 2.19
SDR39U1-204ENST00000553343 ITSN1Q15811 1721 aa28.72■■■□□ 2.19
SDR39U1-204ENST00000553343 HIRIP3Q9BW71 556 aaPredicted RBP28.7■■■□□ 2.18
SDR39U1-204ENST00000553343 ATAD2Q6PL18 1390 aa28.7■■■□□ 2.18
SDR39U1-204ENST00000553343 ATP7BP35670 1465 aa28.68■■■□□ 2.18
SDR39U1-204ENST00000553343 CDK19Q9BWU1 502 aa28.68■■■□□ 2.18
SDR39U1-204ENST00000553343 TOPAZ1Q8N9V7 1692 aa28.67■■■□□ 2.18
SDR39U1-204ENST00000553343 C1orf167Q5SNV9 1468 aa28.67■■■□□ 2.18
SDR39U1-204ENST00000553343 USP32Q8NFA0 1604 aa28.67■■■□□ 2.18
SDR39U1-204ENST00000553343 KIF1AQ12756 1690 aa28.66■■■□□ 2.18
SDR39U1-204ENST00000553343 NINLQ9Y2I6 1382 aa28.65■■■□□ 2.18
SDR39U1-204ENST00000553343 SRPK2P78362 688 aaKnown RBP28.64■■■□□ 2.18
SDR39U1-204ENST00000553343 SLAIN2Q9P270 581 aa28.64■■■□□ 2.18
SDR39U1-204ENST00000553343 DISP3Q9P2K9 1392 aa28.62■■■□□ 2.17
SDR39U1-204ENST00000553343 CCDC61Q9Y6R9 512 aa28.61■■■□□ 2.17
SDR39U1-204ENST00000553343 NUDT16Q96DE0 195 aaKnown RBP28.59■■■□□ 2.17
SDR39U1-204ENST00000553343 UBAP1LF5GYI3 381 aa28.58■■■□□ 2.17
SDR39U1-204ENST00000553343 PRR36Q9H6K5 1346 aa28.58■■■□□ 2.17
SDR39U1-204ENST00000553343 RGPD8O14715 1765 aaPredicted RBP28.57■■■□□ 2.16
SDR39U1-204ENST00000553343 CABP2Q9NPB3 220 aa28.57■■■□□ 2.16
SDR39U1-204ENST00000553343 ROBO1Q9Y6N7 1651 aa28.55■■■□□ 2.16
SDR39U1-204ENST00000553343 PPIP5K1Q6PFW1 1433 aa28.54■■■□□ 2.16
SDR39U1-204ENST00000553343 PLEKHG3A1L390 1219 aa28.54■■■□□ 2.16
SDR39U1-204ENST00000553343 BRINP3Q76B58 766 aa28.52■■■□□ 2.16
SDR39U1-204ENST00000553343 POLR3AO14802 1390 aaPredicted RBP28.51■■■□□ 2.16
SDR39U1-204ENST00000553343 NHSL1Q5SYE7 1610 aa28.51■■■□□ 2.15
SDR39U1-204ENST00000553343 AHDC1Q5TGY3 1603 aaPredicted RBP28.51■■■□□ 2.15
SDR39U1-204ENST00000553343 ESCO1Q5FWF5 840 aa28.51■■■□□ 2.15
SDR39U1-204ENST00000553343 PHF8Q9UPP1 1060 aa28.51■■■□□ 2.15
SDR39U1-204ENST00000553343 MYOM1P52179 1685 aa28.5■■■□□ 2.15
SDR39U1-204ENST00000553343 BRD4O60885 1362 aaPredicted RBP28.5■■■□□ 2.15
SDR39U1-204ENST00000553343 NUTM2FA1L443 756 aa28.49■■■□□ 2.15
SDR39U1-204ENST00000553343 CCDC7Q96M83 1385 aa28.48■■■□□ 2.15
SDR39U1-204ENST00000553343 KIF7Q2M1P5 1343 aa28.47■■■□□ 2.15
SDR39U1-204ENST00000553343 NPHP3Q7Z494 1330 aa28.47■■■□□ 2.15
SDR39U1-204ENST00000553343 ORAI2Q96SN7 254 aa28.47■■■□□ 2.15
SDR39U1-204ENST00000553343 AKAP12Q02952 1782 aa28.45■■■□□ 2.15
SDR39U1-204ENST00000553343 ZNF692Q9BU19 519 aaPredicted RBP28.45■■■□□ 2.14
SDR39U1-204ENST00000553343 CPSF1Q10570 1443 aaKnown RBP28.44■■■□□ 2.14
SDR39U1-204ENST00000553343 CABP1Q9NZU7 370 aa28.44■■■□□ 2.14
SDR39U1-204ENST00000553343 ANKRD36BQ8N2N9 1353 aa28.43■■■□□ 2.14
SDR39U1-204ENST00000553343 C11orf95C9JLR9 678 aaPredicted RBP28.43■■■□□ 2.14
SDR39U1-204ENST00000553343 TERF2IPQ9NYB0 399 aa28.43■■■□□ 2.14
SDR39U1-204ENST00000553343 FBXO41Q8TF61 875 aa28.42■■■□□ 2.14
SDR39U1-204ENST00000553343 WASHC2AQ641Q2 1341 aa28.42■■■□□ 2.14
SDR39U1-204ENST00000553343 MON2Q7Z3U7 1717 aa28.41■■■□□ 2.14
SDR39U1-204ENST00000553343 NGDNQ8NEJ9 315 aaKnown RBP28.41■■■□□ 2.14
SDR39U1-204ENST00000553343 CD163L1Q9NR16 1453 aa28.4■■■□□ 2.14
SDR39U1-204ENST00000553343 PIP4K2BP78356 416 aa28.4■■■□□ 2.14
SDR39U1-204ENST00000553343 HDGFL2Q7Z4V5 671 aaPredicted RBP28.4■■■□□ 2.14
SDR39U1-204ENST00000553343 ACEP12821 1306 aa28.4■■■□□ 2.14
SDR39U1-204ENST00000553343 TMC1Q8TDI8 760 aa28.39■■■□□ 2.14
SDR39U1-204ENST00000553343 PXDNQ92626 1479 aa28.39■■■□□ 2.13
SDR39U1-204ENST00000553343 PMFBP1Q8TBY8 1022 aa28.38■■■□□ 2.13
SDR39U1-204ENST00000553343 SOS2Q07890 1332 aaPredicted RBP28.38■■■□□ 2.13
SDR39U1-204ENST00000553343 USP6P35125 1406 aa28.37■■■□□ 2.13
SDR39U1-204ENST00000553343 PSME1Q06323 249 aa28.37■■■□□ 2.13
SDR39U1-204ENST00000553343 SLC12A5Q9H2X9 1139 aa28.37■■■□□ 2.13
SDR39U1-204ENST00000553343 PHLPP1O60346 1717 aa28.37■■■□□ 2.13
SDR39U1-204ENST00000553343 NRKQ7Z2Y5 1582 aa28.37■■■□□ 2.13
SDR39U1-204ENST00000553343 SBNO1A3KN83 1393 aa28.37■■■□□ 2.13
SDR39U1-204ENST00000553343 ZNF316A6NFI3 1004 aaPredicted RBP28.36■■■□□ 2.13
SDR39U1-204ENST00000553343 FOXO3O43524 673 aa28.36■■■□□ 2.13
SDR39U1-204ENST00000553343 SCAF1Q9H7N4 1312 aaKnown RBP28.36■■■□□ 2.13
SDR39U1-204ENST00000553343 A0A1W2PP64 1363 aa28.35■■■□□ 2.13
SDR39U1-204ENST00000553343 TRPM3Q9HCF6 1732 aaPredicted RBP28.35■■■□□ 2.13
SDR39U1-204ENST00000553343 EDC4Q6P2E9 1401 aaKnown RBP28.35■■■□□ 2.13
SDR39U1-204ENST00000553343 COL16A1Q07092 1604 aaPredicted RBP28.34■■■□□ 2.13
SDR39U1-204ENST00000553343 KTN1Q86UP2 1357 aaKnown RBP28.34■■■□□ 2.13
SDR39U1-204ENST00000553343 SSH2Q76I76 1423 aa28.33■■■□□ 2.13
SDR39U1-204ENST00000553343 POLR3GLQ9BT43 218 aa28.32■■■□□ 2.12
SDR39U1-204ENST00000553343 TTC21AQ8NDW8 1320 aa28.3■■■□□ 2.12
SDR39U1-204ENST00000553343 KRT28Q7Z3Y7 464 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms