RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 SOCS7O14512 581 aa19.14■□□□□ 0.65
HNRNPC-205ENST00000553300 KDM2AQ9Y2K7 1162 aa19.14■□□□□ 0.65
HNRNPC-205ENST00000553300 NHSL1Q5SYE7 1610 aa19.13■□□□□ 0.65
HNRNPC-205ENST00000553300 CDC42BPGQ6DT37 1551 aa19.13■□□□□ 0.65
HNRNPC-205ENST00000553300 SHPRHQ149N8 1683 aa19.11■□□□□ 0.65
HNRNPC-205ENST00000553300 ORAI2Q96SN7 254 aa19.1■□□□□ 0.65
HNRNPC-205ENST00000553300 PLEKHH1Q9ULM0 1364 aa19.1■□□□□ 0.65
HNRNPC-205ENST00000553300 DLC1Q96QB1 1528 aa19.09■□□□□ 0.65
HNRNPC-205ENST00000553300 ESCO1Q5FWF5 840 aa19.08■□□□□ 0.65
HNRNPC-205ENST00000553300 ADGRB1O14514 1584 aa19.07■□□□□ 0.64
HNRNPC-205ENST00000553300 PRAM1Q96QH2 718 aa19.07■□□□□ 0.64
HNRNPC-205ENST00000553300 POGKQ9P215 609 aa19.07■□□□□ 0.64
HNRNPC-205ENST00000553300 RGS17Q9UGC6 210 aaPredicted RBP19.07■□□□□ 0.64
HNRNPC-205ENST00000553300 SOS2Q07890 1332 aaPredicted RBP19.07■□□□□ 0.64
HNRNPC-205ENST00000553300 NPHP3Q7Z494 1330 aa19.06■□□□□ 0.64
HNRNPC-205ENST00000553300 DDX17Q92841 729 aaKnown RBP19.06■□□□□ 0.64
HNRNPC-205ENST00000553300 MEX3CQ5U5Q3 659 aaKnown RBP19.05■□□□□ 0.64
HNRNPC-205ENST00000553300 TRAK1Q9UPV9 953 aa19.04■□□□□ 0.64
HNRNPC-205ENST00000553300 TRIM26Q12899 539 aaPredicted RBP19.03■□□□□ 0.64
HNRNPC-205ENST00000553300 FMN2Q9NZ56 1722 aa19.03■□□□□ 0.64
HNRNPC-205ENST00000553300 PNPLA6Q8IY17 1366 aa19.02■□□□□ 0.64
HNRNPC-205ENST00000553300 LRP6O75581 1613 aa19.01■□□□□ 0.63
HNRNPC-205ENST00000553300 NUTM2FA1L443 756 aa19.01■□□□□ 0.63
HNRNPC-205ENST00000553300 SAFB2Q14151 953 aaKnown RBP eCLIP19.01■□□□□ 0.63
HNRNPC-205ENST00000553300 NUTM2BA6NNL0 878 aaPredicted RBP19■□□□□ 0.63
HNRNPC-205ENST00000553300 NUTM2EB1AL46 878 aaPredicted RBP19■□□□□ 0.63
HNRNPC-205ENST00000553300 FOXO3O43524 673 aa19■□□□□ 0.63
HNRNPC-205ENST00000553300 ZNF772Q68DY9 489 aaPredicted RBP19■□□□□ 0.63
HNRNPC-205ENST00000553300 NUTM2AQ8IVF1 878 aaPredicted RBP19■□□□□ 0.63
HNRNPC-205ENST00000553300 KIAA1210Q9ULL0 1709 aa19■□□□□ 0.63
HNRNPC-205ENST00000553300 POTEAQ6S8J7 498 aa18.98■□□□□ 0.63
HNRNPC-205ENST00000553300 EIF3AQ14152 1382 aaKnown RBP18.98■□□□□ 0.63
HNRNPC-205ENST00000553300 ADGRB2O60241 1585 aa18.98■□□□□ 0.63
HNRNPC-205ENST00000553300 KIF1AQ12756 1690 aa18.97■□□□□ 0.63
HNRNPC-205ENST00000553300 ANKARQ7Z5J8 1434 aa18.97■□□□□ 0.63
HNRNPC-205ENST00000553300 PHF8Q9UPP1 1060 aa18.96■□□□□ 0.63
HNRNPC-205ENST00000553300 PXDNQ92626 1479 aa18.96■□□□□ 0.63
HNRNPC-205ENST00000553300 L3MBTL2Q969R5 705 aa18.95■□□□□ 0.62
HNRNPC-205ENST00000553300 PSME1Q06323 249 aa18.94■□□□□ 0.62
HNRNPC-205ENST00000553300 SIN3AQ96ST3 1273 aa18.94■□□□□ 0.62
HNRNPC-205ENST00000553300 MINK1Q8N4C8 1332 aaPredicted RBP18.94■□□□□ 0.62
HNRNPC-205ENST00000553300 WASLO00401 505 aaPredicted RBP18.93■□□□□ 0.62
HNRNPC-205ENST00000553300 HIRIP3Q9BW71 556 aaPredicted RBP18.93■□□□□ 0.62
HNRNPC-205ENST00000553300 NEUROD1Q13562 356 aa18.93■□□□□ 0.62
HNRNPC-205ENST00000553300 KRT28Q7Z3Y7 464 aa18.93■□□□□ 0.62
HNRNPC-205ENST00000553300 RGPD8O14715 1765 aaPredicted RBP18.92■□□□□ 0.62
HNRNPC-205ENST00000553300 XPCQ01831 940 aaPredicted RBP18.92■□□□□ 0.62
HNRNPC-205ENST00000553300 ARHGEF28Q8N1W1 1705 aaKnown RBP18.92■□□□□ 0.62
HNRNPC-205ENST00000553300 COL22A1Q8NFW1 1626 aaPredicted RBP18.92■□□□□ 0.62
HNRNPC-205ENST00000553300 NBPF1Q3BBV0 1214 aa18.91■□□□□ 0.62
HNRNPC-205ENST00000553300 C8orf37Q96NL8 207 aa18.91■□□□□ 0.62
HNRNPC-205ENST00000553300 AFF2P51816 1311 aa18.9■□□□□ 0.62
HNRNPC-205ENST00000553300 SPATA31A3Q5VYP0 1347 aa18.9■□□□□ 0.62
HNRNPC-205ENST00000553300 ADAMTS2O95450 1211 aa18.89■□□□□ 0.61
HNRNPC-205ENST00000553300 NGLY1Q96IV0 654 aa18.89■□□□□ 0.61
HNRNPC-205ENST00000553300 TULP4Q9NRJ4 1543 aa18.89■□□□□ 0.61
HNRNPC-205ENST00000553300 SBNO1A3KN83 1393 aa18.87■□□□□ 0.61
HNRNPC-205ENST00000553300 USP32Q8NFA0 1604 aa18.87■□□□□ 0.61
HNRNPC-205ENST00000553300 RXRBP28702 533 aa18.86■□□□□ 0.61
HNRNPC-205ENST00000553300 PMFBP1Q8TBY8 1022 aa18.86■□□□□ 0.61
HNRNPC-205ENST00000553300 GPRASP1Q5JY77 1395 aa18.86■□□□□ 0.61
HNRNPC-205ENST00000553300 TNS3Q68CZ2 1445 aa18.85■□□□□ 0.61
HNRNPC-205ENST00000553300 PRR36Q9H6K5 1346 aa18.85■□□□□ 0.61
HNRNPC-205ENST00000553300 CENPJQ9HC77 1338 aaPredicted RBP18.85■□□□□ 0.61
HNRNPC-205ENST00000553300 FNBP4Q8N3X1 1017 aaPredicted RBP18.84■□□□□ 0.61
HNRNPC-205ENST00000553300 NUDT16Q96DE0 195 aaKnown RBP18.84■□□□□ 0.61
HNRNPC-205ENST00000553300 CDK19Q9BWU1 502 aa18.84■□□□□ 0.61
HNRNPC-205ENST00000553300 ARHGEF10O15013 1369 aa18.84■□□□□ 0.61
HNRNPC-205ENST00000553300 NGDNQ8NEJ9 315 aaKnown RBP18.83■□□□□ 0.61
HNRNPC-205ENST00000553300 QTRT2Q9H974 415 aaKnown RBP18.83■□□□□ 0.61
HNRNPC-205ENST00000553300 RBM6P78332 1123 aaKnown RBP18.81■□□□□ 0.6
HNRNPC-205ENST00000553300 USP21Q9UK80 565 aa18.81■□□□□ 0.6
HNRNPC-205ENST00000553300 CCDC61Q9Y6R9 512 aa18.81■□□□□ 0.6
HNRNPC-205ENST00000553300 ITSN1Q15811 1721 aa18.81■□□□□ 0.6
HNRNPC-205ENST00000553300 TRPM1Q7Z4N2 1603 aa18.81■□□□□ 0.6
HNRNPC-205ENST00000553300 LMOD2Q6P5Q4 547 aa18.81■□□□□ 0.6
HNRNPC-205ENST00000553300 ROCK2O75116 1388 aaKnown RBP18.8■□□□□ 0.6
HNRNPC-205ENST00000553300 TONSLQ96HA7 1378 aa18.8■□□□□ 0.6
HNRNPC-205ENST00000553300 ATP7BP35670 1465 aa18.8■□□□□ 0.6
HNRNPC-205ENST00000553300 CDK12Q9NYV4 1490 aaPredicted RBP18.8■□□□□ 0.6
HNRNPC-205ENST00000553300 HAP1P54257 671 aaPredicted RBP18.8■□□□□ 0.6
HNRNPC-205ENST00000553300 TRPC5Q9UL62 973 aaPredicted RBP18.8■□□□□ 0.6
HNRNPC-205ENST00000553300 MARF1Q9Y4F3 1742 aaKnown RBP18.79■□□□□ 0.6
HNRNPC-205ENST00000553300 PLEKHG3A1L390 1219 aa18.77■□□□□ 0.6
HNRNPC-205ENST00000553300 SRPK2P78362 688 aaKnown RBP18.77■□□□□ 0.6
HNRNPC-205ENST00000553300 POLR3AO14802 1390 aaPredicted RBP18.75■□□□□ 0.59
HNRNPC-205ENST00000553300 TRPM3Q9HCF6 1732 aaPredicted RBP18.75■□□□□ 0.59
HNRNPC-205ENST00000553300 NBPF8Q3BBV2 869 aa18.75■□□□□ 0.59
HNRNPC-205ENST00000553300 PAK3O75914 559 aaPredicted RBP18.74■□□□□ 0.59
HNRNPC-205ENST00000553300 QRICH2Q9H0J4 1663 aa18.74■□□□□ 0.59
HNRNPC-205ENST00000553300 EVC2Q86UK5 1308 aa18.74■□□□□ 0.59
HNRNPC-205ENST00000553300 BCL9LQ86UU0 1499 aa18.73■□□□□ 0.59
HNRNPC-205ENST00000553300 CABLES1Q8TDN4 633 aa18.73■□□□□ 0.59
HNRNPC-205ENST00000553300 ACEP12821 1306 aa18.73■□□□□ 0.59
HNRNPC-205ENST00000553300 TOPAZ1Q8N9V7 1692 aa18.73■□□□□ 0.59
HNRNPC-205ENST00000553300 ALS2Q96Q42 1657 aa18.73■□□□□ 0.59
HNRNPC-205ENST00000553300 ATRNO75882 1429 aa18.73■□□□□ 0.59
HNRNPC-205ENST00000553300 UNC5CLQ8IV45 518 aa18.72■□□□□ 0.59
HNRNPC-205ENST00000553300 SLIT2O94813 1529 aa18.71■□□□□ 0.59
HNRNPC-205ENST00000553300 CARD11Q9BXL7 1154 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms