RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 RAPGEF6Q8TEU7 1601 aa13.54□□□□□ -0.24
TGFBR1-209ENST00000552516 KDM6BO15054 1643 aa13.53□□□□□ -0.24
TGFBR1-209ENST00000552516 CASC1Q6TDU7 716 aa13.53□□□□□ -0.24
TGFBR1-209ENST00000552516 SPINK5Q9NQ38 1064 aaPredicted RBP13.53□□□□□ -0.24
TGFBR1-209ENST00000552516 TEFQ10587 303 aa13.53□□□□□ -0.24
TGFBR1-209ENST00000552516 MS4A1P11836 297 aa13.53□□□□□ -0.24
TGFBR1-209ENST00000552516 EIF4G3O43432 1585 aaKnown RBP13.53□□□□□ -0.24
TGFBR1-209ENST00000552516 FAM161AQ3B820 660 aa13.52□□□□□ -0.24
TGFBR1-209ENST00000552516 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.52□□□□□ -0.24
TGFBR1-209ENST00000552516 ERICH6BQ5W0A0 696 aa13.52□□□□□ -0.25
TGFBR1-209ENST00000552516 CARD14Q9BXL6 1004 aa13.51□□□□□ -0.25
TGFBR1-209ENST00000552516 MAP3K1Q13233 1512 aa13.51□□□□□ -0.25
TGFBR1-209ENST00000552516 FAM177BA6PVY3 158 aa13.51□□□□□ -0.25
TGFBR1-209ENST00000552516 NUDT16Q96DE0 195 aaKnown RBP13.51□□□□□ -0.25
TGFBR1-209ENST00000552516 TESK2Q96S53 571 aa13.51□□□□□ -0.25
TGFBR1-209ENST00000552516 DMRT2Q9Y5R5 561 aa13.51□□□□□ -0.25
TGFBR1-209ENST00000552516 FOXO3O43524 673 aa13.5□□□□□ -0.25
TGFBR1-209ENST00000552516 PDZRN3Q9UPQ7 1066 aa13.5□□□□□ -0.25
TGFBR1-209ENST00000552516 CTTNBP2Q8WZ74 1663 aa13.5□□□□□ -0.25
TGFBR1-209ENST00000552516 ADAMTS12P58397 1594 aa13.49□□□□□ -0.25
TGFBR1-209ENST00000552516 MAP4K4O95819 1239 aaPredicted RBP13.49□□□□□ -0.25
TGFBR1-209ENST00000552516 ARID3AQ99856 593 aa13.49□□□□□ -0.25
TGFBR1-209ENST00000552516 STRN4Q9NRL3 753 aa13.49□□□□□ -0.25
TGFBR1-209ENST00000552516 ASXL2Q76L83 1435 aa13.49□□□□□ -0.25
TGFBR1-209ENST00000552516 WDR62O43379 1518 aa13.49□□□□□ -0.25
TGFBR1-209ENST00000552516 KIAA0556O60303 1618 aa13.49□□□□□ -0.25
TGFBR1-209ENST00000552516 KRT24Q2M2I5 525 aa13.48□□□□□ -0.25
TGFBR1-209ENST00000552516 TWISTNBQ3B726 338 aaPredicted RBP13.47□□□□□ -0.25
TGFBR1-209ENST00000552516 PROSER2Q86WR7 435 aaPredicted RBP13.47□□□□□ -0.25
TGFBR1-209ENST00000552516 F6X3S4 739 aa13.47□□□□□ -0.25
TGFBR1-209ENST00000552516 SLC4A2P04920 1241 aa13.47□□□□□ -0.25
TGFBR1-209ENST00000552516 ANXA1P04083 346 aa13.46□□□□□ -0.25
TGFBR1-209ENST00000552516 TMPOP42166 694 aaKnown RBP13.46□□□□□ -0.25
TGFBR1-209ENST00000552516 SLFN5Q08AF3 891 aa13.46□□□□□ -0.25
TGFBR1-209ENST00000552516 CALD1Q05682 793 aaKnown RBP13.46□□□□□ -0.25
TGFBR1-209ENST00000552516 C1orf141Q5JVX7 400 aa13.46□□□□□ -0.25
TGFBR1-209ENST00000552516 SLC52A1Q9NWF4 448 aa13.46□□□□□ -0.25
TGFBR1-209ENST00000552516 RTEL1-TNFRSF6BF6WH68 1400 aa13.46□□□□□ -0.25
TGFBR1-209ENST00000552516 EVA1CP58658 441 aa13.46□□□□□ -0.26
TGFBR1-209ENST00000552516 PZPP20742 1482 aa13.45□□□□□ -0.26
TGFBR1-209ENST00000552516 SSH1Q8WYL5 1049 aa13.45□□□□□ -0.26
TGFBR1-209ENST00000552516 KDM4AO75164 1064 aa13.45□□□□□ -0.26
TGFBR1-209ENST00000552516 AEBP1Q8IUX7 1158 aa13.45□□□□□ -0.26
TGFBR1-209ENST00000552516 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.45□□□□□ -0.26
TGFBR1-209ENST00000552516 TMEM57Q8N5G2 664 aa13.45□□□□□ -0.26
TGFBR1-209ENST00000552516 DUSP27Q5VZP5 1158 aa13.45□□□□□ -0.26
TGFBR1-209ENST00000552516 CCDC85AQ96PX6 553 aaPredicted RBP13.45□□□□□ -0.26
TGFBR1-209ENST00000552516 TRIM44Q96DX7 344 aaPredicted RBP13.44□□□□□ -0.26
TGFBR1-209ENST00000552516 GOLGA6L22H0YM25 854 aa13.44□□□□□ -0.26
TGFBR1-209ENST00000552516 FOSBP53539 338 aa13.44□□□□□ -0.26
TGFBR1-209ENST00000552516 C9orf78Q9NZ63 289 aaPredicted RBP13.43□□□□□ -0.26
TGFBR1-209ENST00000552516 SMARCA5O60264 1052 aaPredicted RBP13.43□□□□□ -0.26
TGFBR1-209ENST00000552516 AMOTL2Q9Y2J4 779 aa13.43□□□□□ -0.26
TGFBR1-209ENST00000552516 IGHDP01880 384 aa13.43□□□□□ -0.26
TGFBR1-209ENST00000552516 DDX54Q8TDD1 881 aaKnown RBP13.43□□□□□ -0.26
TGFBR1-209ENST00000552516 MYL6BP14649 208 aa13.43□□□□□ -0.26
TGFBR1-209ENST00000552516 HSP90AB2PQ58FF8 381 aa13.43□□□□□ -0.26
TGFBR1-209ENST00000552516 TSHZ3Q63HK5 1081 aa13.43□□□□□ -0.26
TGFBR1-209ENST00000552516 DDX19BQ9UMR2 479 aa13.43□□□□□ -0.26
TGFBR1-209ENST00000552516 JARID2Q92833 1246 aaPredicted RBP13.42□□□□□ -0.26
TGFBR1-209ENST00000552516 LMOD3Q0VAK6 560 aa13.42□□□□□ -0.26
TGFBR1-209ENST00000552516 CCDC61Q9Y6R9 512 aa13.42□□□□□ -0.26
TGFBR1-209ENST00000552516 CEP170Q5SW79 1584 aa13.42□□□□□ -0.26
TGFBR1-209ENST00000552516 PTMAP06454 111 aaKnown RBP13.41□□□□□ -0.26
TGFBR1-209ENST00000552516 SIL1Q9H173 461 aa13.41□□□□□ -0.26
TGFBR1-209ENST00000552516 PIP4K2AP48426 406 aaPredicted RBP13.41□□□□□ -0.26
TGFBR1-209ENST00000552516 PER1O15534 1290 aaPredicted RBP13.41□□□□□ -0.26
TGFBR1-209ENST00000552516 FRAT2O75474 233 aaPredicted RBP13.41□□□□□ -0.26
TGFBR1-209ENST00000552516 PLCH2O75038 1416 aa13.41□□□□□ -0.26
TGFBR1-209ENST00000552516 IL1RAPL2Q9NP60 686 aa13.41□□□□□ -0.26
TGFBR1-209ENST00000552516 KAT6BQ8WYB5 2073 aa13.41□□□□□ -0.26
TGFBR1-209ENST00000552516 SMG6Q86US8 1419 aaKnown RBP13.4□□□□□ -0.26
TGFBR1-209ENST00000552516 GORABQ5T7V8 394 aa13.4□□□□□ -0.26
TGFBR1-209ENST00000552516 KIAA1211Q6ZU35 1233 aa13.4□□□□□ -0.26
TGFBR1-209ENST00000552516 FAM135AQ9P2D6 1515 aa13.4□□□□□ -0.26
TGFBR1-209ENST00000552516 DHX29Q7Z478 1369 aaKnown RBP13.4□□□□□ -0.26
TGFBR1-209ENST00000552516 GNAI1P63096 354 aa13.4□□□□□ -0.26
TGFBR1-209ENST00000552516 FYB1O15117 783 aa13.4□□□□□ -0.26
TGFBR1-209ENST00000552516 ATF3P18847 181 aa13.4□□□□□ -0.26
TGFBR1-209ENST00000552516 C14orf93Q9H972 538 aaKnown RBP13.4□□□□□ -0.26
TGFBR1-209ENST00000552516 ANO2Q9NQ90 1003 aa13.4□□□□□ -0.26
TGFBR1-209ENST00000552516 TAF7LQ5H9L4 462 aa13.39□□□□□ -0.27
TGFBR1-209ENST00000552516 KDM5BQ9UGL1 1544 aa13.39□□□□□ -0.27
TGFBR1-209ENST00000552516 RARSP54136 660 aaKnown RBP13.39□□□□□ -0.27
TGFBR1-209ENST00000552516 PRAG1Q86YV5 1406 aa13.39□□□□□ -0.27
TGFBR1-209ENST00000552516 NUTM2BA6NNL0 878 aaPredicted RBP13.38□□□□□ -0.27
TGFBR1-209ENST00000552516 NUTM2EB1AL46 878 aaPredicted RBP13.38□□□□□ -0.27
TGFBR1-209ENST00000552516 NUTM2AQ8IVF1 878 aaPredicted RBP13.38□□□□□ -0.27
TGFBR1-209ENST00000552516 EXOC6BQ9Y2D4 811 aa13.38□□□□□ -0.27
TGFBR1-209ENST00000552516 CFAP43Q8NDM7 1665 aa13.38□□□□□ -0.27
TGFBR1-209ENST00000552516 ABCA5Q8WWZ7 1642 aa13.38□□□□□ -0.27
TGFBR1-209ENST00000552516 CABLES1Q8TDN4 633 aa13.38□□□□□ -0.27
TGFBR1-209ENST00000552516 BACH2Q9BYV9 841 aa13.38□□□□□ -0.27
TGFBR1-209ENST00000552516 PLEKHH1Q9ULM0 1364 aa13.38□□□□□ -0.27
TGFBR1-209ENST00000552516 RLBP1P12271 317 aa13.38□□□□□ -0.27
TGFBR1-209ENST00000552516 CHRNA2Q15822 529 aa13.38□□□□□ -0.27
TGFBR1-209ENST00000552516 PHACTR3Q96KR7 559 aa13.38□□□□□ -0.27
TGFBR1-209ENST00000552516 ISY1Q9ULR0 285 aaKnown RBP13.38□□□□□ -0.27
TGFBR1-209ENST00000552516 HSPA2P54652 639 aa13.38□□□□□ -0.27
TGFBR1-209ENST00000552516 MPRIPQ6WCQ1 1025 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 205.6 ms