RNA–Protein interactions for RNA: ENST00000552408.1

PRIM1-207, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-207ENST00000552408 PRR20DP86480 221 aa10.28□□□□□ -0.76
PRIM1-207ENST00000552408 PRR20BP86481 221 aa10.28□□□□□ -0.76
PRIM1-207ENST00000552408 PRR20AP86496 221 aa10.28□□□□□ -0.76
PRIM1-207ENST00000552408 FAM187AA6NFU0 413 aa10.27□□□□□ -0.77
PRIM1-207ENST00000552408 MYT1Q01538 1121 aa10.26□□□□□ -0.77
PRIM1-207ENST00000552408 RPIAP49247 311 aa10.25□□□□□ -0.77
PRIM1-207ENST00000552408 Q3C1V9 767 aa10.25□□□□□ -0.77
PRIM1-207ENST00000552408 PKDCCQ504Y2 493 aa10.25□□□□□ -0.77
PRIM1-207ENST00000552408 USB1Q9BQ65 265 aaKnown RBP10.25□□□□□ -0.77
PRIM1-207ENST00000552408 SSTR3P32745 418 aaPredicted RBP10.24□□□□□ -0.77
PRIM1-207ENST00000552408 MMP16P51512 607 aa10.24□□□□□ -0.77
PRIM1-207ENST00000552408 USP46P62068 366 aa10.23□□□□□ -0.77
PRIM1-207ENST00000552408 TTLL12Q14166 644 aaPredicted RBP10.23□□□□□ -0.77
PRIM1-207ENST00000552408 PCDHGC3Q9UN70 934 aa10.23□□□□□ -0.77
PRIM1-207ENST00000552408 POTECB2RU33 542 aa10.22□□□□□ -0.77
PRIM1-207ENST00000552408 ST8SIA5O15466 376 aa10.22□□□□□ -0.77
PRIM1-207ENST00000552408 DGAT1O75907 488 aa10.22□□□□□ -0.77
PRIM1-207ENST00000552408 DXOO77932 396 aaKnown RBP10.22□□□□□ -0.77
PRIM1-207ENST00000552408 NUTM1Q86Y26 1132 aa10.22□□□□□ -0.77
PRIM1-207ENST00000552408 NDUFV2P19404 249 aa10.21□□□□□ -0.77
PRIM1-207ENST00000552408 ZNF787Q6DD87 383 aa10.21□□□□□ -0.77
PRIM1-207ENST00000552408 SPIRE2Q8WWL2 714 aa10.21□□□□□ -0.77
PRIM1-207ENST00000552408 CD2BP2O95400 341 aaKnown RBP10.2□□□□□ -0.78
PRIM1-207ENST00000552408 GIGYF2Q6Y7W6 1299 aaKnown RBP10.2□□□□□ -0.78
PRIM1-207ENST00000552408 CCDC24Q8N4L8 307 aa10.2□□□□□ -0.78
PRIM1-207ENST00000552408 TOR4AQ9NXH8 423 aa10.19□□□□□ -0.78
PRIM1-207ENST00000552408 MOXD2PA6NHM9 499 aa10.18□□□□□ -0.78
PRIM1-207ENST00000552408 ZBTB24O43167 697 aaPredicted RBP10.18□□□□□ -0.78
PRIM1-207ENST00000552408 FDX1P10109 184 aa10.18□□□□□ -0.78
PRIM1-207ENST00000552408 TRIM32Q13049 653 aa10.18□□□□□ -0.78
PRIM1-207ENST00000552408 AMHR2Q16671 573 aa10.18□□□□□ -0.78
PRIM1-207ENST00000552408 PARP9Q8IXQ6 854 aa10.17□□□□□ -0.78
PRIM1-207ENST00000552408 TRIM66O15016 1216 aa10.16□□□□□ -0.78
PRIM1-207ENST00000552408 JUNDP17535 347 aa10.16□□□□□ -0.78
PRIM1-207ENST00000552408 DACH1Q9UI36 760 aa10.16□□□□□ -0.78
PRIM1-207ENST00000552408 MS4A1P11836 297 aa10.15□□□□□ -0.78
PRIM1-207ENST00000552408 SKOR1P84550 965 aa10.15□□□□□ -0.78
PRIM1-207ENST00000552408 PTCRAQ6ISU1 281 aaPredicted RBP10.15□□□□□ -0.78
PRIM1-207ENST00000552408 CYP4X1Q8N118 509 aa10.15□□□□□ -0.78
PRIM1-207ENST00000552408 BEGAINQ9BUH8 593 aa10.15□□□□□ -0.78
PRIM1-207ENST00000552408 AAASQ9NRG9 546 aa10.15□□□□□ -0.78
PRIM1-207ENST00000552408 C6orf229H3BNL8 230 aa10.14□□□□□ -0.79
PRIM1-207ENST00000552408 RETREG3Q86VR2 466 aa10.13□□□□□ -0.79
PRIM1-207ENST00000552408 MRGPRX2Q96LB1 330 aa10.13□□□□□ -0.79
PRIM1-207ENST00000552408 WNT7AO00755 349 aa10.11□□□□□ -0.79
PRIM1-207ENST00000552408 TTC24A2A3L6 582 aaPredicted RBP10.1□□□□□ -0.79
PRIM1-207ENST00000552408 J3QL48 77 aa10.1□□□□□ -0.79
PRIM1-207ENST00000552408 SMPD1P17405 629 aa10.09□□□□□ -0.79
PRIM1-207ENST00000552408 ZNF775Q96BV0 537 aaPredicted RBP10.09□□□□□ -0.79
PRIM1-207ENST00000552408 AK7Q96M32 723 aa10.09□□□□□ -0.79
PRIM1-207ENST00000552408 NUDT12Q9BQG2 462 aa10.09□□□□□ -0.79
PRIM1-207ENST00000552408 TBC1D2Q9BYX2 928 aa10.09□□□□□ -0.79
PRIM1-207ENST00000552408 SLC24A3Q9HC58 644 aa10.09□□□□□ -0.79
PRIM1-207ENST00000552408 PCDHB15Q9Y5E8 787 aa10.09□□□□□ -0.79
PRIM1-207ENST00000552408 RC3H1Q5TC82 1133 aaKnown RBP10.07□□□□□ -0.8
PRIM1-207ENST00000552408 PRR7Q8TB68 274 aa10.07□□□□□ -0.8
PRIM1-207ENST00000552408 AVPP01185 164 aa10.06□□□□□ -0.8
PRIM1-207ENST00000552408 SNIP1Q8TAD8 396 aaKnown RBP10.06□□□□□ -0.8
PRIM1-207ENST00000552408 RSBN1LQ6PCB5 846 aaPredicted RBP10.05□□□□□ -0.8
PRIM1-207ENST00000552408 AXIN1O15169 862 aa10.04□□□□□ -0.8
PRIM1-207ENST00000552408 PDE4DQ08499 809 aa10.04□□□□□ -0.8
PRIM1-207ENST00000552408 CSPP1Q1MSJ5 1256 aa10.04□□□□□ -0.8
PRIM1-207ENST00000552408 CABLES1Q8TDN4 633 aa10.04□□□□□ -0.8
PRIM1-207ENST00000552408 HPS1Q92902 700 aa10.04□□□□□ -0.8
PRIM1-207ENST00000552408 GMPR2Q9P2T1 348 aaKnown RBP10.04□□□□□ -0.8
PRIM1-207ENST00000552408 CCNYL3P0C7X3 344 aa10.03□□□□□ -0.8
PRIM1-207ENST00000552408 MTMR2Q13614 643 aa10.03□□□□□ -0.8
PRIM1-207ENST00000552408 LINC01559Q495D7 138 aa10.03□□□□□ -0.8
PRIM1-207ENST00000552408 CFAP99D6REC4 459 aa10.02□□□□□ -0.81
PRIM1-207ENST00000552408 CRIPAKQ8N1N5 446 aa10.02□□□□□ -0.81
PRIM1-207ENST00000552408 WNT7BP56706 349 aa10.01□□□□□ -0.81
PRIM1-207ENST00000552408 SH3BP2P78314 561 aa10.01□□□□□ -0.81
PRIM1-207ENST00000552408 SPTLC1O15269 473 aa10□□□□□ -0.81
PRIM1-207ENST00000552408 HRCP23327 699 aa10□□□□□ -0.81
PRIM1-207ENST00000552408 PTPRNQ16849 979 aa10□□□□□ -0.81
PRIM1-207ENST00000552408 UNC93B1Q9H1C4 597 aa10□□□□□ -0.81
PRIM1-207ENST00000552408 LIMD1Q9UGP4 676 aa10□□□□□ -0.81
PRIM1-207ENST00000552408 RIC3Q7Z5B4 369 aa9.99□□□□□ -0.81
PRIM1-207ENST00000552408 BAP1Q92560 729 aa9.99□□□□□ -0.81
PRIM1-207ENST00000552408 EVA1BQ9NVM1 165 aa9.99□□□□□ -0.81
PRIM1-207ENST00000552408 ALDH1A1P00352 501 aa9.98□□□□□ -0.81
PRIM1-207ENST00000552408 SMCPP49901 116 aaPredicted RBP9.98□□□□□ -0.81
PRIM1-207ENST00000552408 SIAH2O43255 324 aa9.97□□□□□ -0.81
PRIM1-207ENST00000552408 KCNH2Q12809 1159 aa9.97□□□□□ -0.81
PRIM1-207ENST00000552408 QPCTQ16769 361 aa9.97□□□□□ -0.81
PRIM1-207ENST00000552408 CTC1Q2NKJ3 1217 aa9.97□□□□□ -0.81
PRIM1-207ENST00000552408 MYSM1Q5VVJ2 828 aa9.97□□□□□ -0.81
PRIM1-207ENST00000552408 EHBP1Q8NDI1 1231 aa9.97□□□□□ -0.81
PRIM1-207ENST00000552408 MAP10Q9P2G4 905 aa9.96□□□□□ -0.82
PRIM1-207ENST00000552408 TLL2Q9Y6L7 1015 aa9.96□□□□□ -0.82
PRIM1-207ENST00000552408 PER1O15534 1290 aaPredicted RBP9.95□□□□□ -0.82
PRIM1-207ENST00000552408 CTHP32929 405 aa9.95□□□□□ -0.82
PRIM1-207ENST00000552408 SPDYE5A6NIY4 337 aa9.94□□□□□ -0.82
PRIM1-207ENST00000552408 C11orf95C9JLR9 678 aaPredicted RBP9.94□□□□□ -0.82
PRIM1-207ENST00000552408 LYPD8Q6UX82 237 aa9.94□□□□□ -0.82
PRIM1-207ENST00000552408 ZBTB3Q9H5J0 574 aa9.94□□□□□ -0.82
PRIM1-207ENST00000552408 ATP13A2Q9NQ11 1180 aa9.94□□□□□ -0.82
PRIM1-207ENST00000552408 SNRPBP14678 240 aaKnown RBP9.93□□□□□ -0.82
PRIM1-207ENST00000552408 GJA5P36382 358 aa9.93□□□□□ -0.82
PRIM1-207ENST00000552408 DIXDC1Q155Q3 683 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms