RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 DCCP43146 1447 aa25.08■■□□□ 1.61
CDK4-208ENST00000551706 ATAD2Q6PL18 1390 aa25.07■■□□□ 1.6
CDK4-208ENST00000551706 XRN1Q8IZH2 1706 aaKnown RBP25.07■■□□□ 1.6
CDK4-208ENST00000551706 C14orf93Q9H972 538 aaKnown RBP25.07■■□□□ 1.6
CDK4-208ENST00000551706 KDM2AQ9Y2K7 1162 aa25.07■■□□□ 1.6
CDK4-208ENST00000551706 NHSL1Q5SYE7 1610 aa25.07■■□□□ 1.6
CDK4-208ENST00000551706 NGLY1Q96IV0 654 aa25.06■■□□□ 1.6
CDK4-208ENST00000551706 ZRANB1Q9UGI0 708 aa25.06■■□□□ 1.6
CDK4-208ENST00000551706 SIN3AQ96ST3 1273 aa25.05■■□□□ 1.6
CDK4-208ENST00000551706 PRAG1Q86YV5 1406 aa25.04■■□□□ 1.6
CDK4-208ENST00000551706 NEUROD1Q13562 356 aa25.03■■□□□ 1.6
CDK4-208ENST00000551706 MST1RQ04912 1400 aa25.03■■□□□ 1.6
CDK4-208ENST00000551706 LAMC1P11047 1609 aa25.02■■□□□ 1.6
CDK4-208ENST00000551706 PNPLA6Q8IY17 1366 aa25.02■■□□□ 1.6
CDK4-208ENST00000551706 PTCH1Q13635 1447 aa25.02■■□□□ 1.6
CDK4-208ENST00000551706 CFAP70Q5T0N1 1121 aa25.01■■□□□ 1.59
CDK4-208ENST00000551706 LRPPRCP42704 1394 aaKnown RBP24.99■■□□□ 1.59
CDK4-208ENST00000551706 TMEM132EQ6IEE7 984 aa24.98■■□□□ 1.59
CDK4-208ENST00000551706 TECPR2O15040 1411 aa24.97■■□□□ 1.59
CDK4-208ENST00000551706 ABCC11Q96J66 1382 aa24.97■■□□□ 1.59
CDK4-208ENST00000551706 ADAMTS2O95450 1211 aa24.97■■□□□ 1.59
CDK4-208ENST00000551706 DDX17Q92841 729 aaKnown RBP24.97■■□□□ 1.59
CDK4-208ENST00000551706 L3MBTL2Q969R5 705 aa24.97■■□□□ 1.59
CDK4-208ENST00000551706 ROBO2Q9HCK4 1378 aa24.96■■□□□ 1.59
CDK4-208ENST00000551706 YTHDC2Q9H6S0 1430 aaKnown RBP24.95■■□□□ 1.59
CDK4-208ENST00000551706 STK26Q9P289 416 aa24.95■■□□□ 1.58
CDK4-208ENST00000551706 USP21Q9UK80 565 aa24.94■■□□□ 1.58
CDK4-208ENST00000551706 TRPC5Q9UL62 973 aaPredicted RBP24.93■■□□□ 1.58
CDK4-208ENST00000551706 CLSPNQ9HAW4 1339 aa24.92■■□□□ 1.58
CDK4-208ENST00000551706 SIRT1Q96EB6 747 aa24.91■■□□□ 1.58
CDK4-208ENST00000551706 ADGRL3Q9HAR2 1447 aa24.91■■□□□ 1.58
CDK4-208ENST00000551706 TONSLQ96HA7 1378 aa24.91■■□□□ 1.58
CDK4-208ENST00000551706 EP400Q96L91 3159 aa24.91■■□□□ 1.58
CDK4-208ENST00000551706 ADGRB1O14514 1584 aa24.89■■□□□ 1.58
CDK4-208ENST00000551706 CCDC125Q86Z20 511 aa24.89■■□□□ 1.58
CDK4-208ENST00000551706 KNDC1Q76NI1 1749 aa24.89■■□□□ 1.57
CDK4-208ENST00000551706 FNBP4Q8N3X1 1017 aaPredicted RBP24.86■■□□□ 1.57
CDK4-208ENST00000551706 KIAA1210Q9ULL0 1709 aa24.85■■□□□ 1.57
CDK4-208ENST00000551706 WAPLQ7Z5K2 1190 aa24.84■■□□□ 1.57
CDK4-208ENST00000551706 DLC1Q96QB1 1528 aa24.84■■□□□ 1.57
CDK4-208ENST00000551706 ATRNO75882 1429 aa24.84■■□□□ 1.57
CDK4-208ENST00000551706 NALCNQ8IZF0 1738 aa24.82■■□□□ 1.56
CDK4-208ENST00000551706 TRAK1Q9UPV9 953 aa24.82■■□□□ 1.56
CDK4-208ENST00000551706 C1orf167Q5SNV9 1468 aa24.81■■□□□ 1.56
CDK4-208ENST00000551706 SOS2Q07890 1332 aaPredicted RBP24.81■■□□□ 1.56
CDK4-208ENST00000551706 PLEKHH1Q9ULM0 1364 aa24.8■■□□□ 1.56
CDK4-208ENST00000551706 CCER1Q8TC90 406 aaPredicted RBP24.8■■□□□ 1.56
CDK4-208ENST00000551706 PRAM1Q96QH2 718 aa24.8■■□□□ 1.56
CDK4-208ENST00000551706 POGKQ9P215 609 aa24.8■■□□□ 1.56
CDK4-208ENST00000551706 NBPF1Q3BBV0 1214 aa24.78■■□□□ 1.56
CDK4-208ENST00000551706 TIMELESSQ9UNS1 1208 aa24.76■■□□□ 1.55
CDK4-208ENST00000551706 CDC42BPGQ6DT37 1551 aa24.76■■□□□ 1.55
CDK4-208ENST00000551706 ORAI2Q96SN7 254 aa24.74■■□□□ 1.55
CDK4-208ENST00000551706 COL22A1Q8NFW1 1626 aaPredicted RBP24.74■■□□□ 1.55
CDK4-208ENST00000551706 BCL9LQ86UU0 1499 aa24.72■■□□□ 1.55
CDK4-208ENST00000551706 ROCK2O75116 1388 aaKnown RBP24.72■■□□□ 1.55
CDK4-208ENST00000551706 SAFB2Q14151 953 aaKnown RBP eCLIP24.72■■□□□ 1.55
CDK4-208ENST00000551706 NBPF8Q3BBV2 869 aa24.72■■□□□ 1.55
CDK4-208ENST00000551706 TRPM1Q7Z4N2 1603 aa24.72■■□□□ 1.55
CDK4-208ENST00000551706 GJD4Q96KN9 370 aaPredicted RBP24.71■■□□□ 1.55
CDK4-208ENST00000551706 BLMP54132 1417 aaPredicted RBP24.7■■□□□ 1.55
CDK4-208ENST00000551706 ARHGEF28Q8N1W1 1705 aaKnown RBP24.67■■□□□ 1.54
CDK4-208ENST00000551706 GPRASP1Q5JY77 1395 aa24.67■■□□□ 1.54
CDK4-208ENST00000551706 LRP5O75197 1615 aa24.66■■□□□ 1.54
CDK4-208ENST00000551706 ADGRB2O60241 1585 aa24.66■■□□□ 1.54
CDK4-208ENST00000551706 MARF1Q9Y4F3 1742 aaKnown RBP24.66■■□□□ 1.54
CDK4-208ENST00000551706 RALGAPBQ86X10 1494 aa24.65■■□□□ 1.54
CDK4-208ENST00000551706 MINK1Q8N4C8 1332 aaPredicted RBP24.64■■□□□ 1.54
CDK4-208ENST00000551706 DEFB132Q7Z7B7 95 aa24.64■■□□□ 1.54
CDK4-208ENST00000551706 EIF3AQ14152 1382 aaKnown RBP24.64■■□□□ 1.53
CDK4-208ENST00000551706 CENPJQ9HC77 1338 aaPredicted RBP24.63■■□□□ 1.53
CDK4-208ENST00000551706 SF3B2Q13435 895 aaKnown RBP24.62■■□□□ 1.53
CDK4-208ENST00000551706 HIRIP3Q9BW71 556 aaPredicted RBP24.62■■□□□ 1.53
CDK4-208ENST00000551706 CARD11Q9BXL7 1154 aa24.62■■□□□ 1.53
CDK4-208ENST00000551706 NPHP3Q7Z494 1330 aa24.61■■□□□ 1.53
CDK4-208ENST00000551706 FMN2Q9NZ56 1722 aa24.61■■□□□ 1.53
CDK4-208ENST00000551706 WASLO00401 505 aaPredicted RBP24.61■■□□□ 1.53
CDK4-208ENST00000551706 ESCO1Q5FWF5 840 aa24.61■■□□□ 1.53
CDK4-208ENST00000551706 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.61■■□□□ 1.53
CDK4-208ENST00000551706 NUTM2FA1L443 756 aa24.6■■□□□ 1.53
CDK4-208ENST00000551706 ANKARQ7Z5J8 1434 aa24.59■■□□□ 1.53
CDK4-208ENST00000551706 GLI3P10071 1580 aa24.59■■□□□ 1.53
CDK4-208ENST00000551706 UNC5CLQ8IV45 518 aa24.58■■□□□ 1.53
CDK4-208ENST00000551706 PXDNQ92626 1479 aa24.57■■□□□ 1.52
CDK4-208ENST00000551706 BRWD3Q6RI45 1802 aa24.55■■□□□ 1.52
CDK4-208ENST00000551706 TULP4Q9NRJ4 1543 aa24.54■■□□□ 1.52
CDK4-208ENST00000551706 SLIT2O94813 1529 aa24.53■■□□□ 1.52
CDK4-208ENST00000551706 FOXO3O43524 673 aa24.53■■□□□ 1.52
CDK4-208ENST00000551706 XPCQ01831 940 aaPredicted RBP24.53■■□□□ 1.52
CDK4-208ENST00000551706 CDK19Q9BWU1 502 aa24.52■■□□□ 1.52
CDK4-208ENST00000551706 PHF8Q9UPP1 1060 aa24.52■■□□□ 1.52
CDK4-208ENST00000551706 SEPT12Q8IYM1 358 aa24.51■■□□□ 1.51
CDK4-208ENST00000551706 QRICH2Q9H0J4 1663 aa24.5■■□□□ 1.51
CDK4-208ENST00000551706 PSDA5PKW4 1024 aaPredicted RBP24.5■■□□□ 1.51
CDK4-208ENST00000551706 KIF1AQ12756 1690 aa24.5■■□□□ 1.51
CDK4-208ENST00000551706 PRR36Q9H6K5 1346 aa24.49■■□□□ 1.51
CDK4-208ENST00000551706 NUDT16Q96DE0 195 aaKnown RBP24.48■■□□□ 1.51
CDK4-208ENST00000551706 SBNO2Q9Y2G9 1366 aa24.48■■□□□ 1.51
CDK4-208ENST00000551706 USP32Q8NFA0 1604 aa24.47■■□□□ 1.51
CDK4-208ENST00000551706 EVC2Q86UK5 1308 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms