RNA–Protein interactions for RNA: ENST00000550884.2

AC087888.1-201, humanhuman

BASIC

Gene AC087888.1, Length 1,254 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087888.1-201ENST00000550884 TNFRSF10AO00220 468 aa12.23□□□□□ -0.45
AC087888.1-201ENST00000550884 PKD2L1Q9P0L9 805 aa12.22□□□□□ -0.45
AC087888.1-201ENST00000550884 USP46P62068 366 aa12.2□□□□□ -0.46
AC087888.1-201ENST00000550884 Q3C1V9 767 aa12.2□□□□□ -0.46
AC087888.1-201ENST00000550884 RPIAP49247 311 aa12.19□□□□□ -0.46
AC087888.1-201ENST00000550884 MMP16P51512 607 aa12.19□□□□□ -0.46
AC087888.1-201ENST00000550884 SYMPKQ92797 1274 aaKnown RBP12.19□□□□□ -0.46
AC087888.1-201ENST00000550884 USB1Q9BQ65 265 aaKnown RBP12.19□□□□□ -0.46
AC087888.1-201ENST00000550884 SSTR3P32745 418 aaPredicted RBP12.18□□□□□ -0.46
AC087888.1-201ENST00000550884 FOXC1Q12948 553 aa12.17□□□□□ -0.46
AC087888.1-201ENST00000550884 AMHR2Q16671 573 aa12.17□□□□□ -0.46
AC087888.1-201ENST00000550884 DXOO77932 396 aaKnown RBP12.15□□□□□ -0.46
AC087888.1-201ENST00000550884 MYT1Q01538 1121 aa12.15□□□□□ -0.46
AC087888.1-201ENST00000550884 PCDHGC3Q9UN70 934 aa12.15□□□□□ -0.46
AC087888.1-201ENST00000550884 TTLL12Q14166 644 aaPredicted RBP12.14□□□□□ -0.47
AC087888.1-201ENST00000550884 PKDCCQ504Y2 493 aa12.13□□□□□ -0.47
AC087888.1-201ENST00000550884 GIGYF2Q6Y7W6 1299 aaKnown RBP12.13□□□□□ -0.47
AC087888.1-201ENST00000550884 NUTM1Q86Y26 1132 aa12.13□□□□□ -0.47
AC087888.1-201ENST00000550884 SPIRE2Q8WWL2 714 aa12.13□□□□□ -0.47
AC087888.1-201ENST00000550884 DGAT1O75907 488 aa12.12□□□□□ -0.47
AC087888.1-201ENST00000550884 CD2BP2O95400 341 aaKnown RBP12.12□□□□□ -0.47
AC087888.1-201ENST00000550884 FAM187AA6NFU0 413 aa12.11□□□□□ -0.47
AC087888.1-201ENST00000550884 TRIM66O15016 1216 aa12.1□□□□□ -0.47
AC087888.1-201ENST00000550884 NDUFV2P19404 249 aa12.1□□□□□ -0.47
AC087888.1-201ENST00000550884 FDX1P10109 184 aa12.09□□□□□ -0.47
AC087888.1-201ENST00000550884 PARP9Q8IXQ6 854 aa12.09□□□□□ -0.47
AC087888.1-201ENST00000550884 TOR4AQ9NXH8 423 aa12.09□□□□□ -0.47
AC087888.1-201ENST00000550884 MOXD2PA6NHM9 499 aa12.08□□□□□ -0.48
AC087888.1-201ENST00000550884 ZBTB24O43167 697 aaPredicted RBP12.08□□□□□ -0.48
AC087888.1-201ENST00000550884 TRIM32Q13049 653 aa12.07□□□□□ -0.48
AC087888.1-201ENST00000550884 MS4A1P11836 297 aa12.06□□□□□ -0.48
AC087888.1-201ENST00000550884 JUNDP17535 347 aa12.06□□□□□ -0.48
AC087888.1-201ENST00000550884 RETREG3Q86VR2 466 aa12.06□□□□□ -0.48
AC087888.1-201ENST00000550884 BEGAINQ9BUH8 593 aa12.06□□□□□ -0.48
AC087888.1-201ENST00000550884 ZNF787Q6DD87 383 aa12.05□□□□□ -0.48
AC087888.1-201ENST00000550884 CCDC24Q8N4L8 307 aa12.05□□□□□ -0.48
AC087888.1-201ENST00000550884 POTECB2RU33 542 aa12.04□□□□□ -0.48
AC087888.1-201ENST00000550884 ST8SIA5O15466 376 aa12.04□□□□□ -0.48
AC087888.1-201ENST00000550884 AK7Q96M32 723 aa12.04□□□□□ -0.48
AC087888.1-201ENST00000550884 C6orf229H3BNL8 230 aa12.02□□□□□ -0.49
AC087888.1-201ENST00000550884 SKOR1P84550 965 aa12.02□□□□□ -0.49
AC087888.1-201ENST00000550884 PTCRAQ6ISU1 281 aaPredicted RBP12.02□□□□□ -0.49
AC087888.1-201ENST00000550884 AAASQ9NRG9 546 aa12.02□□□□□ -0.49
AC087888.1-201ENST00000550884 WNT7AO00755 349 aa12.01□□□□□ -0.49
AC087888.1-201ENST00000550884 CYP4X1Q8N118 509 aa12.01□□□□□ -0.49
AC087888.1-201ENST00000550884 TBC1D2Q9BYX2 928 aa12□□□□□ -0.49
AC087888.1-201ENST00000550884 MRGPRX2Q96LB1 330 aa11.99□□□□□ -0.49
AC087888.1-201ENST00000550884 SLC24A3Q9HC58 644 aa11.99□□□□□ -0.49
AC087888.1-201ENST00000550884 AVPP01185 164 aa11.98□□□□□ -0.49
AC087888.1-201ENST00000550884 NUDT12Q9BQG2 462 aa11.98□□□□□ -0.49
AC087888.1-201ENST00000550884 DACH1Q9UI36 760 aa11.98□□□□□ -0.49
AC087888.1-201ENST00000550884 PCDHB15Q9Y5E8 787 aa11.97□□□□□ -0.49
AC087888.1-201ENST00000550884 SMPD1P17405 629 aa11.96□□□□□ -0.49
AC087888.1-201ENST00000550884 PDE4DQ08499 809 aa11.96□□□□□ -0.49
AC087888.1-201ENST00000550884 RSBN1LQ6PCB5 846 aaPredicted RBP11.96□□□□□ -0.49
AC087888.1-201ENST00000550884 TTC24A2A3L6 582 aaPredicted RBP11.95□□□□□ -0.5
AC087888.1-201ENST00000550884 J3QL48 77 aa11.95□□□□□ -0.5
AC087888.1-201ENST00000550884 PRR7Q8TB68 274 aa11.95□□□□□ -0.5
AC087888.1-201ENST00000550884 MTMR2Q13614 643 aa11.94□□□□□ -0.5
AC087888.1-201ENST00000550884 RC3H1Q5TC82 1133 aaKnown RBP11.94□□□□□ -0.5
AC087888.1-201ENST00000550884 CRIPAKQ8N1N5 446 aa11.94□□□□□ -0.5
AC087888.1-201ENST00000550884 SNIP1Q8TAD8 396 aaKnown RBP11.94□□□□□ -0.5
AC087888.1-201ENST00000550884 SPTLC1O15269 473 aa11.92□□□□□ -0.5
AC087888.1-201ENST00000550884 WNT7BP56706 349 aa11.92□□□□□ -0.5
AC087888.1-201ENST00000550884 ZNF775Q96BV0 537 aaPredicted RBP11.92□□□□□ -0.5
AC087888.1-201ENST00000550884 CCNYL3P0C7X3 344 aa11.91□□□□□ -0.5
AC087888.1-201ENST00000550884 GJA5P36382 358 aa11.91□□□□□ -0.5
AC087888.1-201ENST00000550884 PTPRNQ16849 979 aa11.9□□□□□ -0.5
AC087888.1-201ENST00000550884 EVA1BQ9NVM1 165 aa11.9□□□□□ -0.5
AC087888.1-201ENST00000550884 CFAP99D6REC4 459 aa11.89□□□□□ -0.51
AC087888.1-201ENST00000550884 HRCP23327 699 aa11.89□□□□□ -0.51
AC087888.1-201ENST00000550884 RIC3Q7Z5B4 369 aa11.89□□□□□ -0.51
AC087888.1-201ENST00000550884 AXIN1O15169 862 aa11.88□□□□□ -0.51
AC087888.1-201ENST00000550884 SMCPP49901 116 aaPredicted RBP11.88□□□□□ -0.51
AC087888.1-201ENST00000550884 SH3BP2P78314 561 aa11.88□□□□□ -0.51
AC087888.1-201ENST00000550884 DIXDC1Q155Q3 683 aa11.88□□□□□ -0.51
AC087888.1-201ENST00000550884 DESI1Q6ICB0 168 aa11.88□□□□□ -0.51
AC087888.1-201ENST00000550884 CABLES1Q8TDN4 633 aa11.88□□□□□ -0.51
AC087888.1-201ENST00000550884 LIMD1Q9UGP4 676 aa11.88□□□□□ -0.51
AC087888.1-201ENST00000550884 SPDYE5A6NIY4 337 aa11.87□□□□□ -0.51
AC087888.1-201ENST00000550884 SIAH2O43255 324 aa11.87□□□□□ -0.51
AC087888.1-201ENST00000550884 HPS1Q92902 700 aa11.87□□□□□ -0.51
AC087888.1-201ENST00000550884 UNC93B1Q9H1C4 597 aa11.87□□□□□ -0.51
AC087888.1-201ENST00000550884 CTC1Q2NKJ3 1217 aa11.86□□□□□ -0.51
AC087888.1-201ENST00000550884 MYSM1Q5VVJ2 828 aa11.86□□□□□ -0.51
AC087888.1-201ENST00000550884 KCNH2Q12809 1159 aa11.85□□□□□ -0.51
AC087888.1-201ENST00000550884 CSPP1Q1MSJ5 1256 aa11.85□□□□□ -0.51
AC087888.1-201ENST00000550884 GMPR2Q9P2T1 348 aaKnown RBP11.85□□□□□ -0.51
AC087888.1-201ENST00000550884 QPCTQ16769 361 aa11.84□□□□□ -0.51
AC087888.1-201ENST00000550884 LINC01559Q495D7 138 aa11.84□□□□□ -0.51
AC087888.1-201ENST00000550884 LYPD8Q6UX82 237 aa11.84□□□□□ -0.51
AC087888.1-201ENST00000550884 BAP1Q92560 729 aa11.84□□□□□ -0.51
AC087888.1-201ENST00000550884 ZBTB3Q9H5J0 574 aa11.84□□□□□ -0.51
AC087888.1-201ENST00000550884 ALDH1A1P00352 501 aa11.82□□□□□ -0.52
AC087888.1-201ENST00000550884 EHBP1Q8NDI1 1231 aa11.82□□□□□ -0.52
AC087888.1-201ENST00000550884 PER1O15534 1290 aaPredicted RBP11.81□□□□□ -0.52
AC087888.1-201ENST00000550884 PRPF38BQ5VTL8 546 aaKnown RBP11.81□□□□□ -0.52
AC087888.1-201ENST00000550884 MAP10Q9P2G4 905 aa11.8□□□□□ -0.52
AC087888.1-201ENST00000550884 F12P00748 615 aaPredicted RBP11.79□□□□□ -0.52
AC087888.1-201ENST00000550884 LILRB3O75022 631 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms