RNA–Protein interactions for RNA: ENST00000550847.1

RAB3IP-214, Transcript of RAB3A interacting protein, humanhuman

TSL 3 BASIC

Gene RAB3IP, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-214ENST00000550847 ANKLE1Q8NAG6 615 aa9.86□□□□□ -0.83
RAB3IP-214ENST00000550847 MSS51Q4VC12 460 aa9.85□□□□□ -0.83
RAB3IP-214ENST00000550847 KDM4CQ9H3R0 1056 aa9.85□□□□□ -0.83
RAB3IP-214ENST00000550847 LIAT1Q6ZQX7 453 aa9.84□□□□□ -0.83
RAB3IP-214ENST00000550847 USB1Q9BQ65 265 aaKnown RBP9.84□□□□□ -0.83
RAB3IP-214ENST00000550847 MYSM1Q5VVJ2 828 aa9.83□□□□□ -0.84
RAB3IP-214ENST00000550847 RSBN1LQ6PCB5 846 aaPredicted RBP9.83□□□□□ -0.84
RAB3IP-214ENST00000550847 FCF1Q9Y324 198 aaKnown RBP9.83□□□□□ -0.84
RAB3IP-214ENST00000550847 PCDHB15Q9Y5E8 787 aa9.83□□□□□ -0.84
RAB3IP-214ENST00000550847 MMP16P51512 607 aa9.82□□□□□ -0.84
RAB3IP-214ENST00000550847 FAM117AQ9C073 453 aa9.82□□□□□ -0.84
RAB3IP-214ENST00000550847 LIMD1Q9UGP4 676 aa9.81□□□□□ -0.84
RAB3IP-214ENST00000550847 V9GY48 417 aaPredicted RBP9.81□□□□□ -0.84
RAB3IP-214ENST00000550847 PLEKHG3A1L390 1219 aa9.8□□□□□ -0.84
RAB3IP-214ENST00000550847 C6orf229H3BNL8 230 aa9.8□□□□□ -0.84
RAB3IP-214ENST00000550847 SPTLC1O15269 473 aa9.8□□□□□ -0.84
RAB3IP-214ENST00000550847 DXOO77932 396 aaKnown RBP9.8□□□□□ -0.84
RAB3IP-214ENST00000550847 PRKCSHP14314 528 aaPredicted RBP9.79□□□□□ -0.84
RAB3IP-214ENST00000550847 SLC19A1P41440 591 aa9.79□□□□□ -0.84
RAB3IP-214ENST00000550847 RIC3Q7Z5B4 369 aa9.79□□□□□ -0.84
RAB3IP-214ENST00000550847 RETREG3Q86VR2 466 aa9.79□□□□□ -0.84
RAB3IP-214ENST00000550847 GJA5P36382 358 aa9.77□□□□□ -0.85
RAB3IP-214ENST00000550847 CABLES1Q8TDN4 633 aa9.77□□□□□ -0.85
RAB3IP-214ENST00000550847 JUNDP17535 347 aa9.76□□□□□ -0.85
RAB3IP-214ENST00000550847 BRPF1P55201 1214 aaPredicted RBP9.76□□□□□ -0.85
RAB3IP-214ENST00000550847 MTMR2Q13614 643 aa9.76□□□□□ -0.85
RAB3IP-214ENST00000550847 DIXDC1Q155Q3 683 aa9.76□□□□□ -0.85
RAB3IP-214ENST00000550847 QPCTQ16769 361 aa9.76□□□□□ -0.85
RAB3IP-214ENST00000550847 CSPP1Q1MSJ5 1256 aa9.76□□□□□ -0.85
RAB3IP-214ENST00000550847 SPRYD7Q5W111 196 aa9.76□□□□□ -0.85
RAB3IP-214ENST00000550847 TRIM67Q6ZTA4 783 aa9.76□□□□□ -0.85
RAB3IP-214ENST00000550847 HRCP23327 699 aa9.75□□□□□ -0.85
RAB3IP-214ENST00000550847 FBXO31Q5XUX0 539 aaPredicted RBP9.75□□□□□ -0.85
RAB3IP-214ENST00000550847 IRX2Q9BZI1 471 aaPredicted RBP9.75□□□□□ -0.85
RAB3IP-214ENST00000550847 CFAP99D6REC4 459 aa9.74□□□□□ -0.85
RAB3IP-214ENST00000550847 NEUROD2Q15784 382 aa9.74□□□□□ -0.85
RAB3IP-214ENST00000550847 PRR7Q8TB68 274 aa9.74□□□□□ -0.85
RAB3IP-214ENST00000550847 POLR3EQ9NVU0 708 aa9.74□□□□□ -0.85
RAB3IP-214ENST00000550847 CLK2P49760 499 aaKnown RBP9.72□□□□□ -0.85
RAB3IP-214ENST00000550847 ZNF697Q5TEC3 545 aa9.71□□□□□ -0.86
RAB3IP-214ENST00000550847 ZNF598Q86UK7 904 aaKnown RBP9.71□□□□□ -0.86
RAB3IP-214ENST00000550847 DDRGK1Q96HY6 314 aa9.71□□□□□ -0.86
RAB3IP-214ENST00000550847 ZBTB3Q9H5J0 574 aa9.71□□□□□ -0.86
RAB3IP-214ENST00000550847 LILRB3O75022 631 aa9.7□□□□□ -0.86
RAB3IP-214ENST00000550847 RPIAP49247 311 aa9.7□□□□□ -0.86
RAB3IP-214ENST00000550847 TUSC1Q2TAM9 212 aa9.7□□□□□ -0.86
RAB3IP-214ENST00000550847 RTL5Q5HYW3 569 aaPredicted RBP9.7□□□□□ -0.86
RAB3IP-214ENST00000550847 PRPF38BQ5VTL8 546 aaKnown RBP9.7□□□□□ -0.86
RAB3IP-214ENST00000550847 CCDC24Q8N4L8 307 aa9.7□□□□□ -0.86
RAB3IP-214ENST00000550847 SPDYE5A6NIY4 337 aa9.69□□□□□ -0.86
RAB3IP-214ENST00000550847 SH3D19Q5HYK7 790 aa9.69□□□□□ -0.86
RAB3IP-214ENST00000550847 PTCRAQ6ISU1 281 aaPredicted RBP9.69□□□□□ -0.86
RAB3IP-214ENST00000550847 PROCA1Q8NCQ7 364 aaPredicted RBP9.69□□□□□ -0.86
RAB3IP-214ENST00000550847 NUDT12Q9BQG2 462 aa9.69□□□□□ -0.86
RAB3IP-214ENST00000550847 RSPH6AQ9H0K4 717 aa9.69□□□□□ -0.86
RAB3IP-214ENST00000550847 GFRA3O60609 400 aa9.68□□□□□ -0.86
RAB3IP-214ENST00000550847 PKD2L1Q9P0L9 805 aa9.68□□□□□ -0.86
RAB3IP-214ENST00000550847 PER1O15534 1290 aaPredicted RBP9.67□□□□□ -0.86
RAB3IP-214ENST00000550847 GDF9O60383 454 aa9.67□□□□□ -0.86
RAB3IP-214ENST00000550847 TRIM32Q13049 653 aa9.67□□□□□ -0.86
RAB3IP-214ENST00000550847 SKIV2LQ15477 1246 aaKnown RBP9.67□□□□□ -0.86
RAB3IP-214ENST00000550847 PDZRN3Q9UPQ7 1066 aa9.67□□□□□ -0.86
RAB3IP-214ENST00000550847 TNFRSF10AO00220 468 aa9.66□□□□□ -0.86
RAB3IP-214ENST00000550847 LCE2BO14633 110 aa9.66□□□□□ -0.86
RAB3IP-214ENST00000550847 CCNYL3P0C7X3 344 aa9.66□□□□□ -0.86
RAB3IP-214ENST00000550847 PTPRNQ16849 979 aa9.66□□□□□ -0.86
RAB3IP-214ENST00000550847 DESI1Q6ICB0 168 aa9.66□□□□□ -0.86
RAB3IP-214ENST00000550847 IL27Q8NEV9 243 aa9.66□□□□□ -0.86
RAB3IP-214ENST00000550847 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.66□□□□□ -0.86
RAB3IP-214ENST00000550847 NUTM2BA6NNL0 878 aaPredicted RBP9.64□□□□□ -0.87
RAB3IP-214ENST00000550847 NUTM2EB1AL46 878 aaPredicted RBP9.64□□□□□ -0.87
RAB3IP-214ENST00000550847 NRG2O14511 850 aaPredicted RBP9.64□□□□□ -0.87
RAB3IP-214ENST00000550847 SKOR1P84550 965 aa9.64□□□□□ -0.87
RAB3IP-214ENST00000550847 NUTM2DQ5VT03 806 aaPredicted RBP9.64□□□□□ -0.87
RAB3IP-214ENST00000550847 LYPD8Q6UX82 237 aa9.64□□□□□ -0.87
RAB3IP-214ENST00000550847 NUTM2AQ8IVF1 878 aaPredicted RBP9.64□□□□□ -0.87
RAB3IP-214ENST00000550847 ZBTB24O43167 697 aaPredicted RBP9.63□□□□□ -0.87
RAB3IP-214ENST00000550847 PRR20EP86478 221 aa9.63□□□□□ -0.87
RAB3IP-214ENST00000550847 PRR20CP86479 221 aa9.63□□□□□ -0.87
RAB3IP-214ENST00000550847 PRR20DP86480 221 aa9.63□□□□□ -0.87
RAB3IP-214ENST00000550847 PRR20BP86481 221 aa9.63□□□□□ -0.87
RAB3IP-214ENST00000550847 PRR20AP86496 221 aa9.63□□□□□ -0.87
RAB3IP-214ENST00000550847 FOXC1Q12948 553 aa9.63□□□□□ -0.87
RAB3IP-214ENST00000550847 EVA1BQ9NVM1 165 aa9.63□□□□□ -0.87
RAB3IP-214ENST00000550847 CD2BP2O95400 341 aaKnown RBP9.62□□□□□ -0.87
RAB3IP-214ENST00000550847 TSC1Q92574 1164 aa9.62□□□□□ -0.87
RAB3IP-214ENST00000550847 MAP10Q9P2G4 905 aa9.62□□□□□ -0.87
RAB3IP-214ENST00000550847 F12P00748 615 aaPredicted RBP9.61□□□□□ -0.87
RAB3IP-214ENST00000550847 KCNH2Q12809 1159 aa9.6□□□□□ -0.87
RAB3IP-214ENST00000550847 UNC93B1Q9H1C4 597 aa9.6□□□□□ -0.87
RAB3IP-214ENST00000550847 LAPTM4AQ15012 233 aa9.59□□□□□ -0.87
RAB3IP-214ENST00000550847 Q6ZNB5 142 aa9.59□□□□□ -0.87
RAB3IP-214ENST00000550847 CTDSPL2Q05D32 466 aa9.58□□□□□ -0.88
RAB3IP-214ENST00000550847 PPP2R2DQ66LE6 453 aa9.58□□□□□ -0.88
RAB3IP-214ENST00000550847 WNT7AO00755 349 aa9.57□□□□□ -0.88
RAB3IP-214ENST00000550847 LINC01559Q495D7 138 aa9.57□□□□□ -0.88
RAB3IP-214ENST00000550847 MRGPRX2Q96LB1 330 aa9.57□□□□□ -0.88
RAB3IP-214ENST00000550847 TOR4AQ9NXH8 423 aa9.57□□□□□ -0.88
RAB3IP-214ENST00000550847 CTHP32929 405 aa9.56□□□□□ -0.88
RAB3IP-214ENST00000550847 SH3BP2P78314 561 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms