RNA–Protein interactions for RNA: ENST00000550375.1

BRF1-217, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-217ENST00000550375 GPRASP1Q5JY77 1395 aa24.46■■□□□ 1.51
BRF1-217ENST00000550375 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.45■■□□□ 1.51
BRF1-217ENST00000550375 MSH6P52701 1360 aa24.45■■□□□ 1.51
BRF1-217ENST00000550375 C19orf44Q9H6X5 657 aa24.43■■□□□ 1.5
BRF1-217ENST00000550375 ADGRL3Q9HAR2 1447 aa24.43■■□□□ 1.5
BRF1-217ENST00000550375 UBAP1LF5GYI3 381 aa24.42■■□□□ 1.5
BRF1-217ENST00000550375 MINK1Q8N4C8 1332 aaPredicted RBP24.4■■□□□ 1.5
BRF1-217ENST00000550375 ATF3P18847 181 aa24.39■■□□□ 1.49
BRF1-217ENST00000550375 CENPJQ9HC77 1338 aaPredicted RBP24.38■■□□□ 1.49
BRF1-217ENST00000550375 QRICH2Q9H0J4 1663 aa24.37■■□□□ 1.49
BRF1-217ENST00000550375 TOM1O60784 492 aa24.37■■□□□ 1.49
BRF1-217ENST00000550375 HIRIP3Q9BW71 556 aaPredicted RBP24.37■■□□□ 1.49
BRF1-217ENST00000550375 EIF3AQ14152 1382 aaKnown RBP24.37■■□□□ 1.49
BRF1-217ENST00000550375 CADPS2Q86UW7 1296 aa24.35■■□□□ 1.49
BRF1-217ENST00000550375 DCCP43146 1447 aa24.34■■□□□ 1.49
BRF1-217ENST00000550375 CDC42BPGQ6DT37 1551 aa24.34■■□□□ 1.49
BRF1-217ENST00000550375 SCAF1Q9H7N4 1312 aaKnown RBP24.33■■□□□ 1.49
BRF1-217ENST00000550375 PIP4K2BP78356 416 aa24.33■■□□□ 1.49
BRF1-217ENST00000550375 ADGRB2O60241 1585 aa24.31■■□□□ 1.48
BRF1-217ENST00000550375 USP47Q96K76 1375 aa24.31■■□□□ 1.48
BRF1-217ENST00000550375 NUTM2FA1L443 756 aa24.3■■□□□ 1.48
BRF1-217ENST00000550375 SLAIN2Q9P270 581 aa24.3■■□□□ 1.48
BRF1-217ENST00000550375 FMN2Q9NZ56 1722 aa24.3■■□□□ 1.48
BRF1-217ENST00000550375 MST1RQ04912 1400 aa24.28■■□□□ 1.48
BRF1-217ENST00000550375 ST20-MTHFSA0A0A6YYL1 179 aa24.28■■□□□ 1.48
BRF1-217ENST00000550375 WASLO00401 505 aaPredicted RBP24.27■■□□□ 1.48
BRF1-217ENST00000550375 RGPD8O14715 1765 aaPredicted RBP24.26■■□□□ 1.47
BRF1-217ENST00000550375 SOCS7O14512 581 aa24.25■■□□□ 1.47
BRF1-217ENST00000550375 CDK19Q9BWU1 502 aa24.24■■□□□ 1.47
BRF1-217ENST00000550375 C1orf167Q5SNV9 1468 aa24.24■■□□□ 1.47
BRF1-217ENST00000550375 ROBO1Q9Y6N7 1651 aa24.24■■□□□ 1.47
BRF1-217ENST00000550375 TULP4Q9NRJ4 1543 aa24.22■■□□□ 1.47
BRF1-217ENST00000550375 EIF4G2P78344 907 aaKnown RBP eCLIP24.21■■□□□ 1.47
BRF1-217ENST00000550375 USP32Q8NFA0 1604 aa24.21■■□□□ 1.47
BRF1-217ENST00000550375 ZEB1P37275 1124 aaPredicted RBP24.2■■□□□ 1.46
BRF1-217ENST00000550375 ORAI2Q96SN7 254 aa24.2■■□□□ 1.46
BRF1-217ENST00000550375 EVC2Q86UK5 1308 aa24.2■■□□□ 1.46
BRF1-217ENST00000550375 HSPA5P11021 654 aaKnown RBP24.19■■□□□ 1.46
BRF1-217ENST00000550375 HSPA1LP34931 641 aa24.19■■□□□ 1.46
BRF1-217ENST00000550375 SRPK2P78362 688 aaKnown RBP24.19■■□□□ 1.46
BRF1-217ENST00000550375 ESCO1Q5FWF5 840 aa24.19■■□□□ 1.46
BRF1-217ENST00000550375 CABP2Q9NPB3 220 aa24.19■■□□□ 1.46
BRF1-217ENST00000550375 SBNO2Q9Y2G9 1366 aa24.19■■□□□ 1.46
BRF1-217ENST00000550375 BRINP3Q76B58 766 aa24.18■■□□□ 1.46
BRF1-217ENST00000550375 TESK2Q96S53 571 aa24.18■■□□□ 1.46
BRF1-217ENST00000550375 PRR36Q9H6K5 1346 aa24.17■■□□□ 1.46
BRF1-217ENST00000550375 ANKARQ7Z5J8 1434 aa24.17■■□□□ 1.46
BRF1-217ENST00000550375 NUDT16Q96DE0 195 aaKnown RBP24.16■■□□□ 1.46
BRF1-217ENST00000550375 ATP7BP35670 1465 aa24.14■■□□□ 1.46
BRF1-217ENST00000550375 ITSN1Q15811 1721 aa24.14■■□□□ 1.45
BRF1-217ENST00000550375 DDX17Q92841 729 aaKnown RBP24.12■■□□□ 1.45
BRF1-217ENST00000550375 PMFBP1Q8TBY8 1022 aa24.11■■□□□ 1.45
BRF1-217ENST00000550375 PHF8Q9UPP1 1060 aa24.11■■□□□ 1.45
BRF1-217ENST00000550375 PHLPP1O60346 1717 aa24.1■■□□□ 1.45
BRF1-217ENST00000550375 KIF1AQ12756 1690 aa24.1■■□□□ 1.45
BRF1-217ENST00000550375 TOPAZ1Q8N9V7 1692 aa24.1■■□□□ 1.45
BRF1-217ENST00000550375 TMF1P82094 1093 aa24.1■■□□□ 1.45
BRF1-217ENST00000550375 SLC24A1O60721 1099 aa24.09■■□□□ 1.45
BRF1-217ENST00000550375 NHSL1Q5SYE7 1610 aa24.09■■□□□ 1.45
BRF1-217ENST00000550375 CCDC61Q9Y6R9 512 aa24.08■■□□□ 1.45
BRF1-217ENST00000550375 FOXO3O43524 673 aa24.07■■□□□ 1.44
BRF1-217ENST00000550375 PPIP5K1Q6PFW1 1433 aa24.07■■□□□ 1.44
BRF1-217ENST00000550375 AHDC1Q5TGY3 1603 aaPredicted RBP24.06■■□□□ 1.44
BRF1-217ENST00000550375 XPCQ01831 940 aaPredicted RBP24.04■■□□□ 1.44
BRF1-217ENST00000550375 NGDNQ8NEJ9 315 aaKnown RBP24.04■■□□□ 1.44
BRF1-217ENST00000550375 ATAD2Q6PL18 1390 aa24.04■■□□□ 1.44
BRF1-217ENST00000550375 CABP1Q9NZU7 370 aa24.03■■□□□ 1.44
BRF1-217ENST00000550375 NPHP3Q7Z494 1330 aa24.02■■□□□ 1.44
BRF1-217ENST00000550375 TMC1Q8TDI8 760 aa24.02■■□□□ 1.44
BRF1-217ENST00000550375 POLR3GLQ9BT43 218 aa24.02■■□□□ 1.44
BRF1-217ENST00000550375 COL16A1Q07092 1604 aaPredicted RBP24.01■■□□□ 1.43
BRF1-217ENST00000550375 PLEKHG3A1L390 1219 aa24.01■■□□□ 1.43
BRF1-217ENST00000550375 PSME1Q06323 249 aa24.01■■□□□ 1.43
BRF1-217ENST00000550375 ACEP12821 1306 aa24■■□□□ 1.43
BRF1-217ENST00000550375 MED1Q15648 1581 aaPredicted RBP24■■□□□ 1.43
BRF1-217ENST00000550375 CDCA8Q53HL2 280 aa24■■□□□ 1.43
BRF1-217ENST00000550375 PUS7Q96PZ0 661 aaKnown RBP24■■□□□ 1.43
BRF1-217ENST00000550375 KRT28Q7Z3Y7 464 aa23.99■■□□□ 1.43
BRF1-217ENST00000550375 PXDNQ92626 1479 aa23.98■■□□□ 1.43
BRF1-217ENST00000550375 C11orf95C9JLR9 678 aaPredicted RBP23.98■■□□□ 1.43
BRF1-217ENST00000550375 SOS2Q07890 1332 aaPredicted RBP23.98■■□□□ 1.43
BRF1-217ENST00000550375 SLC12A5Q9H2X9 1139 aa23.97■■□□□ 1.43
BRF1-217ENST00000550375 POLR3AO14802 1390 aaPredicted RBP23.96■■□□□ 1.43
BRF1-217ENST00000550375 AKAP12Q02952 1782 aa23.95■■□□□ 1.42
BRF1-217ENST00000550375 LRRC59Q96AG4 307 aaKnown RBP23.93■■□□□ 1.42
BRF1-217ENST00000550375 MYOM1P52179 1685 aa23.92■■□□□ 1.42
BRF1-217ENST00000550375 TRPM3Q9HCF6 1732 aaPredicted RBP23.92■■□□□ 1.42
BRF1-217ENST00000550375 PAK3O75914 559 aaPredicted RBP23.91■■□□□ 1.42
BRF1-217ENST00000550375 LMOD2Q6P5Q4 547 aa23.9■■□□□ 1.42
BRF1-217ENST00000550375 HDGFL2Q7Z4V5 671 aaPredicted RBP23.9■■□□□ 1.42
BRF1-217ENST00000550375 KIF7Q2M1P5 1343 aa23.9■■□□□ 1.42
BRF1-217ENST00000550375 NINLQ9Y2I6 1382 aa23.89■■□□□ 1.42
BRF1-217ENST00000550375 CD163L1Q9NR16 1453 aa23.89■■□□□ 1.42
BRF1-217ENST00000550375 TERF2IPQ9NYB0 399 aa23.89■■□□□ 1.41
BRF1-217ENST00000550375 KTN1Q86UP2 1357 aaKnown RBP23.89■■□□□ 1.41
BRF1-217ENST00000550375 CPSF1Q10570 1443 aaKnown RBP23.89■■□□□ 1.41
BRF1-217ENST00000550375 MON2Q7Z3U7 1717 aa23.88■■□□□ 1.41
BRF1-217ENST00000550375 USP6P35125 1406 aa23.88■■□□□ 1.41
BRF1-217ENST00000550375 SBNO1A3KN83 1393 aa23.88■■□□□ 1.41
BRF1-217ENST00000550375 JCADQ9P266 1359 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms