RNA–Protein interactions for RNA: ENST00000550309.1

AL355112.1-201, humanhuman

TSL 1 (best) BASIC

Gene AL355112.1, Length 1,236 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL355112.1-201ENST00000550309 SULF1Q8IWU6 871 aa10.93□□□□□ -0.66
AL355112.1-201ENST00000550309 CYP4X1Q8N118 509 aa10.93□□□□□ -0.66
AL355112.1-201ENST00000550309 DACH1Q9UI36 760 aa10.93□□□□□ -0.66
AL355112.1-201ENST00000550309 AVPP01185 164 aa10.92□□□□□ -0.66
AL355112.1-201ENST00000550309 BRICD5Q6PL45 260 aa10.92□□□□□ -0.66
AL355112.1-201ENST00000550309 TREML4Q6UXN2 200 aa10.92□□□□□ -0.66
AL355112.1-201ENST00000550309 PHOX2BQ99453 314 aa10.92□□□□□ -0.66
AL355112.1-201ENST00000550309 SALL2Q9Y467 1007 aaPredicted RBP10.92□□□□□ -0.66
AL355112.1-201ENST00000550309 BRPF1P55201 1214 aaPredicted RBP10.91□□□□□ -0.66
AL355112.1-201ENST00000550309 LCE2AQ5TA79 106 aaPredicted RBP10.9□□□□□ -0.66
AL355112.1-201ENST00000550309 AXIN1O15169 862 aa10.89□□□□□ -0.67
AL355112.1-201ENST00000550309 MSS51Q4VC12 460 aa10.88□□□□□ -0.67
AL355112.1-201ENST00000550309 RNF19BQ6ZMZ0 732 aa10.88□□□□□ -0.67
AL355112.1-201ENST00000550309 ZBTB24O43167 697 aaPredicted RBP10.87□□□□□ -0.67
AL355112.1-201ENST00000550309 CTC1Q2NKJ3 1217 aa10.87□□□□□ -0.67
AL355112.1-201ENST00000550309 GMPR2Q9P2T1 348 aaKnown RBP10.87□□□□□ -0.67
AL355112.1-201ENST00000550309 GRIPAP1Q4V328 841 aa10.85□□□□□ -0.67
AL355112.1-201ENST00000550309 TTC24A2A3L6 582 aaPredicted RBP10.84□□□□□ -0.67
AL355112.1-201ENST00000550309 C11orf95C9JLR9 678 aaPredicted RBP10.84□□□□□ -0.67
AL355112.1-201ENST00000550309 SMCPP49901 116 aaPredicted RBP10.84□□□□□ -0.67
AL355112.1-201ENST00000550309 NEUROD2Q15784 382 aa10.84□□□□□ -0.67
AL355112.1-201ENST00000550309 ZC3H15Q8WU90 426 aaKnown RBP10.83□□□□□ -0.68
AL355112.1-201ENST00000550309 WNT7AO00755 349 aa10.82□□□□□ -0.68
AL355112.1-201ENST00000550309 GPIHBP1Q8IV16 184 aa10.82□□□□□ -0.68
AL355112.1-201ENST00000550309 TRIM32Q13049 653 aa10.81□□□□□ -0.68
AL355112.1-201ENST00000550309 Q3C1V9 767 aa10.81□□□□□ -0.68
AL355112.1-201ENST00000550309 SMPD1P17405 629 aa10.8□□□□□ -0.68
AL355112.1-201ENST00000550309 MMP16P51512 607 aa10.8□□□□□ -0.68
AL355112.1-201ENST00000550309 SNIP1Q8TAD8 396 aaKnown RBP10.8□□□□□ -0.68
AL355112.1-201ENST00000550309 SUPT5HO00267 1087 aaKnown RBP10.79□□□□□ -0.68
AL355112.1-201ENST00000550309 WFS1O76024 890 aa10.79□□□□□ -0.68
AL355112.1-201ENST00000550309 CD46P15529 392 aa10.78□□□□□ -0.68
AL355112.1-201ENST00000550309 MRGPRX2Q96LB1 330 aa10.78□□□□□ -0.68
AL355112.1-201ENST00000550309 SLC24A3Q9HC58 644 aa10.78□□□□□ -0.68
AL355112.1-201ENST00000550309 USB1Q9BQ65 265 aaKnown RBP10.76□□□□□ -0.69
AL355112.1-201ENST00000550309 J3QL48 77 aa10.75□□□□□ -0.69
AL355112.1-201ENST00000550309 KDM4AO75164 1064 aa10.75□□□□□ -0.69
AL355112.1-201ENST00000550309 DXOO77932 396 aaKnown RBP10.75□□□□□ -0.69
AL355112.1-201ENST00000550309 NFX1Q12986 1120 aaKnown RBP10.75□□□□□ -0.69
AL355112.1-201ENST00000550309 ATP13A2Q9NQ11 1180 aa10.75□□□□□ -0.69
AL355112.1-201ENST00000550309 SNRPBP14678 240 aaKnown RBP10.72□□□□□ -0.69
AL355112.1-201ENST00000550309 MAP2K5Q13163 448 aa10.72□□□□□ -0.69
AL355112.1-201ENST00000550309 HLA-CQ95604 372 aa10.72□□□□□ -0.69
AL355112.1-201ENST00000550309 CCDC24Q8N4L8 307 aa10.71□□□□□ -0.69
AL355112.1-201ENST00000550309 HPS1Q92902 700 aa10.71□□□□□ -0.69
AL355112.1-201ENST00000550309 REPIN1Q9BWE0 567 aaKnown RBP10.71□□□□□ -0.69
AL355112.1-201ENST00000550309 USP46P62068 366 aa10.69□□□□□ -0.7
AL355112.1-201ENST00000550309 MDM2Q00987 491 aaPredicted RBP10.69□□□□□ -0.7
AL355112.1-201ENST00000550309 TRIM47Q96LD4 638 aa10.69□□□□□ -0.7
AL355112.1-201ENST00000550309 IRF6O14896 467 aa10.68□□□□□ -0.7
AL355112.1-201ENST00000550309 WIPF1O43516 503 aa10.68□□□□□ -0.7
AL355112.1-201ENST00000550309 RC3H1Q5TC82 1133 aaKnown RBP10.68□□□□□ -0.7
AL355112.1-201ENST00000550309 SENP2Q9HC62 589 aa10.68□□□□□ -0.7
AL355112.1-201ENST00000550309 HOXA2O43364 376 aa10.67□□□□□ -0.7
AL355112.1-201ENST00000550309 SKOR1P84550 965 aa10.67□□□□□ -0.7
AL355112.1-201ENST00000550309 WNT7BP56706 349 aa10.66□□□□□ -0.7
AL355112.1-201ENST00000550309 LCE2CQ5TA81 110 aa10.66□□□□□ -0.7
AL355112.1-201ENST00000550309 TERTO14746 1132 aaKnown RBP10.65□□□□□ -0.7
AL355112.1-201ENST00000550309 GUCA2AQ02747 115 aa10.65□□□□□ -0.7
AL355112.1-201ENST00000550309 STK17AQ9UEE5 414 aa10.65□□□□□ -0.7
AL355112.1-201ENST00000550309 ZMYND10O75800 440 aa10.64□□□□□ -0.71
AL355112.1-201ENST00000550309 INSM1Q01101 510 aaPredicted RBP10.64□□□□□ -0.71
AL355112.1-201ENST00000550309 JUNDP17535 347 aa10.63□□□□□ -0.71
AL355112.1-201ENST00000550309 KIFC2Q96AC6 838 aa10.63□□□□□ -0.71
AL355112.1-201ENST00000550309 MINK1Q8N4C8 1332 aaPredicted RBP10.62□□□□□ -0.71
AL355112.1-201ENST00000550309 ALDH1A1P00352 501 aa10.62□□□□□ -0.71
AL355112.1-201ENST00000550309 SYMPKQ92797 1274 aaKnown RBP10.62□□□□□ -0.71
AL355112.1-201ENST00000550309 CCDC102AQ96A19 550 aa10.59□□□□□ -0.71
AL355112.1-201ENST00000550309 FAM217BQ9NTX9 383 aaPredicted RBP10.59□□□□□ -0.71
AL355112.1-201ENST00000550309 PTCRAQ6ISU1 281 aaPredicted RBP10.58□□□□□ -0.72
AL355112.1-201ENST00000550309 NUDT12Q9BQG2 462 aa10.58□□□□□ -0.72
AL355112.1-201ENST00000550309 GPCPD1Q9NPB8 672 aa10.58□□□□□ -0.72
AL355112.1-201ENST00000550309 CLCN1P35523 988 aa10.57□□□□□ -0.72
AL355112.1-201ENST00000550309 BARGINQ6ZT62 677 aa10.57□□□□□ -0.72
AL355112.1-201ENST00000550309 RETREG3Q86VR2 466 aa10.57□□□□□ -0.72
AL355112.1-201ENST00000550309 SIAH2O43255 324 aa10.56□□□□□ -0.72
AL355112.1-201ENST00000550309 NUTM1Q86Y26 1132 aa10.56□□□□□ -0.72
AL355112.1-201ENST00000550309 EHBP1Q8NDI1 1231 aa10.56□□□□□ -0.72
AL355112.1-201ENST00000550309 AK7Q96M32 723 aa10.54□□□□□ -0.72
AL355112.1-201ENST00000550309 BMP1P13497 986 aa10.53□□□□□ -0.72
AL355112.1-201ENST00000550309 FDX1P10109 184 aa10.52□□□□□ -0.73
AL355112.1-201ENST00000550309 TRIM46Q7Z4K8 759 aa10.52□□□□□ -0.73
AL355112.1-201ENST00000550309 PODXL2Q9NZ53 605 aa10.52□□□□□ -0.73
AL355112.1-201ENST00000550309 PCDHGC3Q9UN70 934 aa10.52□□□□□ -0.73
AL355112.1-201ENST00000550309 WASF2Q9Y6W5 498 aa10.52□□□□□ -0.73
AL355112.1-201ENST00000550309 C6orf229H3BNL8 230 aa10.51□□□□□ -0.73
AL355112.1-201ENST00000550309 CAPN5O15484 640 aaPredicted RBP10.51□□□□□ -0.73
AL355112.1-201ENST00000550309 SH3BP2P78314 561 aa10.51□□□□□ -0.73
AL355112.1-201ENST00000550309 KRI1Q8N9T8 703 aaKnown RBP10.51□□□□□ -0.73
AL355112.1-201ENST00000550309 SLC16A10Q8TF71 515 aa10.51□□□□□ -0.73
AL355112.1-201ENST00000550309 GPBP1L1Q9HC44 474 aaPredicted RBP10.51□□□□□ -0.73
AL355112.1-201ENST00000550309 NXF1Q9UBU9 619 aaKnown RBP10.51□□□□□ -0.73
AL355112.1-201ENST00000550309 CCNYL3P0C7X3 344 aa10.5□□□□□ -0.73
AL355112.1-201ENST00000550309 MS4A1P11836 297 aa10.5□□□□□ -0.73
AL355112.1-201ENST00000550309 ZMYND15Q9H091 742 aa10.5□□□□□ -0.73
AL355112.1-201ENST00000550309 IL27Q8NEV9 243 aa10.49□□□□□ -0.73
AL355112.1-201ENST00000550309 UBTFP17480 764 aaKnown RBP10.48□□□□□ -0.73
AL355112.1-201ENST00000550309 PTPRNQ16849 979 aa10.46□□□□□ -0.73
AL355112.1-201ENST00000550309 RSPH6AQ9H0K4 717 aa10.46□□□□□ -0.73
AL355112.1-201ENST00000550309 UNC93B1Q9H1C4 597 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms